RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 GUCD1Q96NT3 240 aa13.59□□□□□ -0.23
HLA-C-206ENST00000470363 LSG1Q9H089 658 aaKnown RBP13.59□□□□□ -0.23
HLA-C-206ENST00000470363 A1CFQ9NQ94 594 aaKnown RBP13.59□□□□□ -0.23
HLA-C-206ENST00000470363 TCP11L1Q9NUJ3 509 aa13.59□□□□□ -0.23
HLA-C-206ENST00000470363 CCDC171Q6TFL3 1326 aa13.59□□□□□ -0.23
HLA-C-206ENST00000470363 RAD50Q92878 1312 aa13.59□□□□□ -0.23
HLA-C-206ENST00000470363 VCANP13611 3396 aa13.58□□□□□ -0.23
HLA-C-206ENST00000470363 TSPY2A6NKD2 308 aa13.58□□□□□ -0.24
HLA-C-206ENST00000470363 CLTBP09497 229 aa13.58□□□□□ -0.24
HLA-C-206ENST00000470363 HSPD1P10809 573 aaKnown RBP13.58□□□□□ -0.24
HLA-C-206ENST00000470363 SLC4A3P48751 1232 aa13.58□□□□□ -0.24
HLA-C-206ENST00000470363 GJA9P57773 515 aa13.58□□□□□ -0.24
HLA-C-206ENST00000470363 CACNB1Q02641 598 aaPredicted RBP13.58□□□□□ -0.24
HLA-C-206ENST00000470363 TKFCQ3LXA3 575 aa13.58□□□□□ -0.24
HLA-C-206ENST00000470363 PPP4R3BQ5MIZ7 849 aa13.58□□□□□ -0.24
HLA-C-206ENST00000470363 SLC17A8Q8NDX2 589 aa13.58□□□□□ -0.24
HLA-C-206ENST00000470363 C22orf23Q9BZE7 217 aa13.58□□□□□ -0.24
HLA-C-206ENST00000470363 ACAD9Q9H845 621 aa13.58□□□□□ -0.24
HLA-C-206ENST00000470363 UPF2Q9HAU5 1272 aaKnown RBP13.58□□□□□ -0.24
HLA-C-206ENST00000470363 PRDM5Q9NQX1 630 aaPredicted RBP13.58□□□□□ -0.24
HLA-C-206ENST00000470363 ZHX1Q9UKY1 873 aaPredicted RBP13.58□□□□□ -0.24
HLA-C-206ENST00000470363 PRR12Q9ULL5 1215 aa13.58□□□□□ -0.24
HLA-C-206ENST00000470363 STX8Q9UNK0 236 aa13.58□□□□□ -0.24
HLA-C-206ENST00000470363 RANBP6O60518 1105 aaKnown RBP13.57□□□□□ -0.24
HLA-C-206ENST00000470363 SNAP25P60880 206 aa13.57□□□□□ -0.24
HLA-C-206ENST00000470363 MUM1L1Q5H9M0 696 aa13.57□□□□□ -0.24
HLA-C-206ENST00000470363 MORC4Q8TE76 937 aa13.57□□□□□ -0.24
HLA-C-206ENST00000470363 NUP133Q8WUM0 1156 aa13.57□□□□□ -0.24
HLA-C-206ENST00000470363 TRERF1Q96PN7 1200 aa13.57□□□□□ -0.24
HLA-C-206ENST00000470363 HOMER2Q9NSB8 354 aa13.57□□□□□ -0.24
HLA-C-206ENST00000470363 RNF146Q9NTX7 359 aa13.57□□□□□ -0.24
HLA-C-206ENST00000470363 GNEQ9Y223 722 aaKnown RBP13.57□□□□□ -0.24
HLA-C-206ENST00000470363 CTDP1Q9Y5B0 961 aaPredicted RBP13.57□□□□□ -0.24
HLA-C-206ENST00000470363 ELP1O95163 1332 aa13.57□□□□□ -0.24
HLA-C-206ENST00000470363 ZMYM6O95789 1325 aa13.57□□□□□ -0.24
HLA-C-206ENST00000470363 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.56□□□□□ -0.24
HLA-C-206ENST00000470363 PQBP1O60828 265 aaKnown RBP13.56□□□□□ -0.24
HLA-C-206ENST00000470363 ASGR1P07306 291 aa13.56□□□□□ -0.24
HLA-C-206ENST00000470363 TTBK2Q6IQ55 1244 aa13.56□□□□□ -0.24
HLA-C-206ENST00000470363 SLC43A3Q8NBI5 491 aa13.56□□□□□ -0.24
HLA-C-206ENST00000470363 CHMP4CQ96CF2 233 aa13.56□□□□□ -0.24
HLA-C-206ENST00000470363 TMEM47Q9BQJ4 181 aa13.56□□□□□ -0.24
HLA-C-206ENST00000470363 RANBP17Q9H2T7 1088 aaKnown RBP13.56□□□□□ -0.24
HLA-C-206ENST00000470363 STARD7Q9NQZ5 370 aa13.56□□□□□ -0.24
HLA-C-206ENST00000470363 CYP39A1Q9NYL5 469 aa13.56□□□□□ -0.24
HLA-C-206ENST00000470363 TBX21Q9UL17 535 aa13.56□□□□□ -0.24
HLA-C-206ENST00000470363 DDX49Q9Y6V7 483 aaKnown RBP13.56□□□□□ -0.24
HLA-C-206ENST00000470363 EIF5BO60841 1220 aaKnown RBP13.55□□□□□ -0.24
HLA-C-206ENST00000470363 ICAM1P05362 532 aa13.55□□□□□ -0.24
HLA-C-206ENST00000470363 SNHG28P0DPA3 235 aa13.55□□□□□ -0.24
HLA-C-206ENST00000470363 SMAD3P84022 425 aaKnown RBP13.55□□□□□ -0.24
HLA-C-206ENST00000470363 TAPT1Q6NXT6 567 aa13.55□□□□□ -0.24
HLA-C-206ENST00000470363 C16orf59Q7L2K0 433 aa13.55□□□□□ -0.24
HLA-C-206ENST00000470363 PCSK9Q8NBP7 692 aaKnown RBP13.55□□□□□ -0.24
HLA-C-206ENST00000470363 DCAF4Q8WV16 495 aa13.55□□□□□ -0.24
HLA-C-206ENST00000470363 TBC1D32Q96NH3 1257 aa13.55□□□□□ -0.24
HLA-C-206ENST00000470363 PURBQ96QR8 312 aaKnown RBP13.55□□□□□ -0.24
HLA-C-206ENST00000470363 SEMA6BQ9H3T3 888 aa13.55□□□□□ -0.24
HLA-C-206ENST00000470363 TMEM39AQ9NV64 488 aa13.55□□□□□ -0.24
HLA-C-206ENST00000470363 RBM8AQ9Y5S9 174 aaKnown RBP13.55□□□□□ -0.24
HLA-C-206ENST00000470363 ASB14A6NK59 587 aa13.54□□□□□ -0.24
HLA-C-206ENST00000470363 TIMP1P01033 207 aa13.54□□□□□ -0.24
HLA-C-206ENST00000470363 C6orf222P0C671 652 aaPredicted RBP13.54□□□□□ -0.24
HLA-C-206ENST00000470363 TOP1P11387 765 aaKnown RBP13.54□□□□□ -0.24
HLA-C-206ENST00000470363 ALAS1P13196 640 aa13.54□□□□□ -0.24
HLA-C-206ENST00000470363 PTGS1P23219 599 aa13.54□□□□□ -0.24
HLA-C-206ENST00000470363 SLC16A2P36021 539 aa13.54□□□□□ -0.24
HLA-C-206ENST00000470363 GNASQ5JWF2 1037 aa13.54□□□□□ -0.24
HLA-C-206ENST00000470363 TMEM63BQ5T3F8 832 aa13.54□□□□□ -0.24
HLA-C-206ENST00000470363 CCDC174Q6PII3 467 aa13.54□□□□□ -0.24
HLA-C-206ENST00000470363 MAP4K1Q92918 833 aa13.54□□□□□ -0.24
HLA-C-206ENST00000470363 TTC14Q96N46 770 aa13.54□□□□□ -0.24
HLA-C-206ENST00000470363 TTYH1Q9H313 450 aaPredicted RBP13.54□□□□□ -0.24
HLA-C-206ENST00000470363 PDGFCQ9NRA1 345 aa13.54□□□□□ -0.24
HLA-C-206ENST00000470363 RBM19Q9Y4C8 960 aaKnown RBP13.54□□□□□ -0.24
HLA-C-206ENST00000470363 LAMA4Q16363 1823 aa13.54□□□□□ -0.24
HLA-C-206ENST00000470363 DCDC2CA8MYV0 355 aa13.53□□□□□ -0.24
HLA-C-206ENST00000470363 ARVCFO00192 962 aa13.53□□□□□ -0.24
HLA-C-206ENST00000470363 CD4P01730 458 aa13.53□□□□□ -0.24
HLA-C-206ENST00000470363 PDHBP11177 359 aa13.53□□□□□ -0.24
HLA-C-206ENST00000470363 PCP11498 1178 aaKnown RBP13.53□□□□□ -0.24
HLA-C-206ENST00000470363 RAG1P15918 1043 aa13.53□□□□□ -0.24
HLA-C-206ENST00000470363 SMPD1P17405 629 aa13.53□□□□□ -0.24
HLA-C-206ENST00000470363 TNFAIP2Q03169 654 aa13.53□□□□□ -0.24
HLA-C-206ENST00000470363 AKNAD1Q5T1N1 836 aa13.53□□□□□ -0.24
HLA-C-206ENST00000470363 TBC1D10CQ8IV04 446 aa13.53□□□□□ -0.24
HLA-C-206ENST00000470363 FAM126BQ8IXS8 530 aa13.53□□□□□ -0.24
HLA-C-206ENST00000470363 CLEC4DQ8WXI8 215 aa13.53□□□□□ -0.24
HLA-C-206ENST00000470363 GLT1D1Q96MS3 346 aa13.53□□□□□ -0.24
HLA-C-206ENST00000470363 Q9Y3F1 56 aa13.53□□□□□ -0.24
HLA-C-206ENST00000470363 GRIN2DO15399 1336 aa13.53□□□□□ -0.24
HLA-C-206ENST00000470363 HSPA4P34932 840 aa13.52□□□□□ -0.25
HLA-C-206ENST00000470363 RBM25P49756 843 aaKnown RBP13.52□□□□□ -0.25
HLA-C-206ENST00000470363 HAND2P61296 217 aa13.52□□□□□ -0.25
HLA-C-206ENST00000470363 BEX3Q00994 111 aa13.52□□□□□ -0.25
HLA-C-206ENST00000470363 FPGSQ05932 587 aa13.52□□□□□ -0.25
HLA-C-206ENST00000470363 IKQ13123 557 aaPredicted RBP13.52□□□□□ -0.25
HLA-C-206ENST00000470363 NECTIN1Q15223 517 aa13.52□□□□□ -0.25
HLA-C-206ENST00000470363 RASIP1Q5U651 963 aa13.52□□□□□ -0.25
HLA-C-206ENST00000470363 SYDE2Q5VT97 1194 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms