RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-210ENST00000469565 ZNF214Q9UL59 606 aaPredicted RBP15.79■□□□□ 0.12
LMNA-210ENST00000469565 V9GY48 417 aaPredicted RBP15.79■□□□□ 0.12
LMNA-210ENST00000469565 ZNF536O15090 1300 aa15.78■□□□□ 0.12
LMNA-210ENST00000469565 CNTNAP5Q8WYK1 1306 aa15.78■□□□□ 0.12
LMNA-210ENST00000469565 PNMA6FA0A0J9YX94 578 aa15.78■□□□□ 0.12
LMNA-210ENST00000469565 MYCP01106 439 aaPredicted RBP15.78■□□□□ 0.12
LMNA-210ENST00000469565 ICAM1P05362 532 aa15.78■□□□□ 0.12
LMNA-210ENST00000469565 ERCC3P19447 782 aa15.78■□□□□ 0.12
LMNA-210ENST00000469565 OAZ1P54368 228 aa15.78■□□□□ 0.12
LMNA-210ENST00000469565 SSRP1Q08945 709 aaKnown RBP15.78■□□□□ 0.12
LMNA-210ENST00000469565 CHRDL2Q6WN34 429 aa15.78■□□□□ 0.12
LMNA-210ENST00000469565 RIOX2Q8IUF8 465 aa15.78■□□□□ 0.12
LMNA-210ENST00000469565 GTF3C6Q969F1 213 aa15.78■□□□□ 0.12
LMNA-210ENST00000469565 RIPK3Q9Y572 518 aa15.78■□□□□ 0.12
LMNA-210ENST00000469565 ZSWIM8A7E2V4 1837 aa15.78■□□□□ 0.12
LMNA-210ENST00000469565 NID2Q14112 1375 aa15.77■□□□□ 0.12
LMNA-210ENST00000469565 DLL1O00548 723 aa15.77■□□□□ 0.12
LMNA-210ENST00000469565 ATP2A1O14983 1001 aa15.77■□□□□ 0.12
LMNA-210ENST00000469565 CDKL5O76039 1030 aa15.77■□□□□ 0.12
LMNA-210ENST00000469565 FMNL1O95466 1100 aaPredicted RBP15.77■□□□□ 0.12
LMNA-210ENST00000469565 SLC25A27O95847 323 aa15.77■□□□□ 0.12
LMNA-210ENST00000469565 PSMC4P43686 418 aa15.77■□□□□ 0.12
LMNA-210ENST00000469565 LACTBP83111 547 aaPredicted RBP15.77■□□□□ 0.12
LMNA-210ENST00000469565 NTRK3Q16288 839 aa15.77■□□□□ 0.12
LMNA-210ENST00000469565 TRIM22Q8IYM9 498 aa15.77■□□□□ 0.12
LMNA-210ENST00000469565 MTMR8Q96EF0 704 aa15.77■□□□□ 0.12
LMNA-210ENST00000469565 TMX3Q96JJ7 454 aa15.77■□□□□ 0.12
LMNA-210ENST00000469565 TRERF1Q96PN7 1200 aa15.77■□□□□ 0.12
LMNA-210ENST00000469565 AMNQ9BXJ7 453 aa15.77■□□□□ 0.12
LMNA-210ENST00000469565 ARHGAP39Q9C0H5 1083 aa15.77■□□□□ 0.12
LMNA-210ENST00000469565 IVNS1ABPQ9Y6Y0 642 aa15.77■□□□□ 0.12
LMNA-210ENST00000469565 PLXNB2O15031 1838 aa15.76■□□□□ 0.11
LMNA-210ENST00000469565 IFNAR1P17181 557 aa15.76■□□□□ 0.11
LMNA-210ENST00000469565 MAPK4P31152 587 aa15.76■□□□□ 0.11
LMNA-210ENST00000469565 FCGRTP55899 365 aa15.76■□□□□ 0.11
LMNA-210ENST00000469565 FUT2Q10981 343 aa15.76■□□□□ 0.11
LMNA-210ENST00000469565 HEATR3Q7Z4Q2 680 aa15.76■□□□□ 0.11
LMNA-210ENST00000469565 HSCBQ8IWL3 235 aa15.76■□□□□ 0.11
LMNA-210ENST00000469565 DPF3Q92784 378 aa15.76■□□□□ 0.11
LMNA-210ENST00000469565 COA7Q96BR5 231 aa15.76■□□□□ 0.11
LMNA-210ENST00000469565 RNF146Q9NTX7 359 aa15.76■□□□□ 0.11
LMNA-210ENST00000469565 PNMA2Q9UL42 364 aa15.76■□□□□ 0.11
LMNA-210ENST00000469565 PCDHA1Q9Y5I3 950 aa15.76■□□□□ 0.11
LMNA-210ENST00000469565 SZT2Q5T011 3432 aa15.75■□□□□ 0.11
LMNA-210ENST00000469565 TNPO2O14787 897 aaKnown RBP15.75■□□□□ 0.11
LMNA-210ENST00000469565 PRPF3O43395 683 aaKnown RBP15.75■□□□□ 0.11
LMNA-210ENST00000469565 PPP1R11O60927 126 aaPredicted RBP15.75■□□□□ 0.11
LMNA-210ENST00000469565 COPB2P35606 906 aa15.75■□□□□ 0.11
LMNA-210ENST00000469565 TKFCQ3LXA3 575 aa15.75■□□□□ 0.11
LMNA-210ENST00000469565 MUM1L1Q5H9M0 696 aa15.75■□□□□ 0.11
LMNA-210ENST00000469565 GPR142Q7Z601 462 aa15.75■□□□□ 0.11
LMNA-210ENST00000469565 PLEKHH3Q7Z736 793 aa15.75■□□□□ 0.11
LMNA-210ENST00000469565 SLC17A8Q8NDX2 589 aa15.75■□□□□ 0.11
LMNA-210ENST00000469565 SHCBP1Q8NEM2 672 aa15.75■□□□□ 0.11
LMNA-210ENST00000469565 SH3TC2Q8TF17 1288 aa15.75■□□□□ 0.11
LMNA-210ENST00000469565 GPKOWQ92917 476 aaPredicted RBP eCLIP15.75■□□□□ 0.11
LMNA-210ENST00000469565 DDX11Q96FC9 970 aa15.75■□□□□ 0.11
LMNA-210ENST00000469565 RNF26Q9BY78 433 aaPredicted RBP15.75■□□□□ 0.11
LMNA-210ENST00000469565 MROH8Q9H579 483 aa15.75■□□□□ 0.11
LMNA-210ENST00000469565 RBM27Q9P2N5 1060 aaKnown RBP15.75■□□□□ 0.11
LMNA-210ENST00000469565 MRPL11Q9Y3B7 192 aaKnown RBP15.75■□□□□ 0.11
LMNA-210ENST00000469565 ABCB11O95342 1321 aa15.74■□□□□ 0.11
LMNA-210ENST00000469565 CTDNEP1O95476 244 aa15.74■□□□□ 0.11
LMNA-210ENST00000469565 CTGFP29279 349 aa15.74■□□□□ 0.11
LMNA-210ENST00000469565 ST3GAL1Q11201 340 aa15.74■□□□□ 0.11
LMNA-210ENST00000469565 TRAF1Q13077 416 aa15.74■□□□□ 0.11
LMNA-210ENST00000469565 NSMFQ6X4W1 530 aa15.74■□□□□ 0.11
LMNA-210ENST00000469565 CHST13Q8NET6 341 aa15.74■□□□□ 0.11
LMNA-210ENST00000469565 MMP19Q99542 508 aa15.74■□□□□ 0.11
LMNA-210ENST00000469565 ACAD9Q9H845 621 aa15.74■□□□□ 0.11
LMNA-210ENST00000469565 ORC3Q9UBD5 711 aaPredicted RBP15.74■□□□□ 0.11
LMNA-210ENST00000469565 FBXO40Q9UH90 709 aa15.74■□□□□ 0.11
LMNA-210ENST00000469565 PTPDC1A2A3K4 754 aa15.73■□□□□ 0.11
LMNA-210ENST00000469565 K7ELQ4 463 aaPredicted RBP15.73■□□□□ 0.11
LMNA-210ENST00000469565 JAK2O60674 1132 aa15.73■□□□□ 0.11
LMNA-210ENST00000469565 GNRH1P01148 92 aa15.73■□□□□ 0.11
LMNA-210ENST00000469565 FCER1AP12319 257 aa15.73■□□□□ 0.11
LMNA-210ENST00000469565 SCG2P13521 617 aa15.73■□□□□ 0.11
LMNA-210ENST00000469565 HOXD10P28358 340 aa15.73■□□□□ 0.11
LMNA-210ENST00000469565 ANKRD35Q8N283 1001 aa15.73■□□□□ 0.11
LMNA-210ENST00000469565 NSUN7Q8NE18 718 aaKnown RBP15.73■□□□□ 0.11
LMNA-210ENST00000469565 SNX21Q969T3 373 aa15.73■□□□□ 0.11
LMNA-210ENST00000469565 TRIM47Q96LD4 638 aa15.73■□□□□ 0.11
LMNA-210ENST00000469565 PLXNA1Q9UIW2 1896 aa15.72■□□□□ 0.11
LMNA-210ENST00000469565 NFIBO00712 420 aa15.72■□□□□ 0.11
LMNA-210ENST00000469565 DEXIO95424 95 aa15.72■□□□□ 0.11
LMNA-210ENST00000469565 PTPREP23469 700 aa15.72■□□□□ 0.11
LMNA-210ENST00000469565 FOSBP53539 338 aa15.72■□□□□ 0.11
LMNA-210ENST00000469565 NAPAP54920 295 aa15.72■□□□□ 0.11
LMNA-210ENST00000469565 PRMT2P55345 433 aa15.72■□□□□ 0.11
LMNA-210ENST00000469565 KCTD2Q14681 263 aa15.72■□□□□ 0.11
LMNA-210ENST00000469565 PKN1Q16512 942 aa15.72■□□□□ 0.11
LMNA-210ENST00000469565 PFKFB3Q16875 520 aaPredicted RBP15.72■□□□□ 0.11
LMNA-210ENST00000469565 WWC2Q6AWC2 1192 aa15.72■□□□□ 0.11
LMNA-210ENST00000469565 NUDT12Q9BQG2 462 aa15.72■□□□□ 0.11
LMNA-210ENST00000469565 STRNO43815 780 aa15.71■□□□□ 0.11
LMNA-210ENST00000469565 CFBP00751 764 aa15.71■□□□□ 0.11
LMNA-210ENST00000469565 MCF2L2Q86YR7 1114 aa15.71■□□□□ 0.11
LMNA-210ENST00000469565 FAM184AQ8NB25 1140 aa15.71■□□□□ 0.11
LMNA-210ENST00000469565 CLEC4DQ8WXI8 215 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms