RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 PRDM1O75626 825 aa15.3■□□□□ 0.04
TRAPPC12-216ENST00000469400 BMP3P12645 472 aa15.3■□□□□ 0.04
TRAPPC12-216ENST00000469400 PSMC6P62333 389 aa15.3■□□□□ 0.04
TRAPPC12-216ENST00000469400 SLFN13Q68D06 897 aa15.3■□□□□ 0.04
TRAPPC12-216ENST00000469400 ZNF444Q8N0Y2 327 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC12-216ENST00000469400 C1QTNF1Q9BXJ1 281 aa15.3■□□□□ 0.04
TRAPPC12-216ENST00000469400 SEZ6LQ9BYH1 1024 aa15.3■□□□□ 0.04
TRAPPC12-216ENST00000469400 DDX49Q9Y6V7 483 aaKnown RBP15.3■□□□□ 0.04
TRAPPC12-216ENST00000469400 ZNF536O15090 1300 aa15.29■□□□□ 0.04
TRAPPC12-216ENST00000469400 ZBBXA8MT70 800 aa15.29■□□□□ 0.04
TRAPPC12-216ENST00000469400 TMEM232C9JQI7 657 aa15.29■□□□□ 0.04
TRAPPC12-216ENST00000469400 TTLL1O95922 423 aa15.29■□□□□ 0.04
TRAPPC12-216ENST00000469400 FDX1P10109 184 aa15.29■□□□□ 0.04
TRAPPC12-216ENST00000469400 ATP2A2P16615 1042 aaKnown RBP15.29■□□□□ 0.04
TRAPPC12-216ENST00000469400 KCNQ1P51787 676 aa15.29■□□□□ 0.04
TRAPPC12-216ENST00000469400 AAK1Q2M2I8 961 aa15.29■□□□□ 0.04
TRAPPC12-216ENST00000469400 OSBP2Q969R2 916 aa15.29■□□□□ 0.04
TRAPPC12-216ENST00000469400 SCLYQ96I15 445 aa15.29■□□□□ 0.04
TRAPPC12-216ENST00000469400 AGBL1Q96MI9 1066 aa15.29■□□□□ 0.04
TRAPPC12-216ENST00000469400 PDGFCQ9NRA1 345 aa15.29■□□□□ 0.04
TRAPPC12-216ENST00000469400 RNF146Q9NTX7 359 aa15.29■□□□□ 0.04
TRAPPC12-216ENST00000469400 ZBTB40Q9NUA8 1239 aa15.29■□□□□ 0.04
TRAPPC12-216ENST00000469400 COG6Q9Y2V7 657 aa15.29■□□□□ 0.04
TRAPPC12-216ENST00000469400 XIRP2A4UGR9 3374 aa15.28■□□□□ 0.04
TRAPPC12-216ENST00000469400 ERC2O15083 957 aa15.28■□□□□ 0.04
TRAPPC12-216ENST00000469400 SKIV2LQ15477 1246 aaKnown RBP15.28■□□□□ 0.04
TRAPPC12-216ENST00000469400 TMEM63BQ5T3F8 832 aa15.28■□□□□ 0.04
TRAPPC12-216ENST00000469400 IQSEC1Q6DN90 963 aa15.28■□□□□ 0.04
TRAPPC12-216ENST00000469400 TAPT1Q6NXT6 567 aa15.28■□□□□ 0.04
TRAPPC12-216ENST00000469400 EEPD1Q7L9B9 569 aa15.28■□□□□ 0.04
TRAPPC12-216ENST00000469400 TRERF1Q96PN7 1200 aa15.28■□□□□ 0.04
TRAPPC12-216ENST00000469400 ALDH8A1Q9H2A2 487 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC12-216ENST00000469400 ZNF287Q9HBT7 754 aa15.28■□□□□ 0.04
TRAPPC12-216ENST00000469400 EPB41L4AQ9HCS5 686 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC12-216ENST00000469400 ISY1Q9ULR0 285 aaKnown RBP15.28■□□□□ 0.04
TRAPPC12-216ENST00000469400 Q9Y3F1 56 aa15.28■□□□□ 0.04
TRAPPC12-216ENST00000469400 TCF20Q9UGU0 1960 aaKnown RBP15.27■□□□□ 0.04
TRAPPC12-216ENST00000469400 PRRC2BQ5JSZ5 2229 aaKnown RBP15.27■□□□□ 0.04
TRAPPC12-216ENST00000469400 RFXAPO00287 272 aa15.27■□□□□ 0.04
TRAPPC12-216ENST00000469400 TDO2P48775 406 aa15.27■□□□□ 0.04
TRAPPC12-216ENST00000469400 STAT2P52630 851 aa15.27■□□□□ 0.04
TRAPPC12-216ENST00000469400 TTLL4Q14679 1199 aa15.27■□□□□ 0.04
TRAPPC12-216ENST00000469400 TKFCQ3LXA3 575 aa15.27■□□□□ 0.04
TRAPPC12-216ENST00000469400 FBXO16Q8IX29 292 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC12-216ENST00000469400 STAG1Q8WVM7 1258 aa15.27■□□□□ 0.04
TRAPPC12-216ENST00000469400 APPBP2Q92624 585 aa15.27■□□□□ 0.04
TRAPPC12-216ENST00000469400 MTCH2Q9Y6C9 303 aa15.27■□□□□ 0.04
TRAPPC12-216ENST00000469400 GBF1Q92538 1859 aa15.27■□□□□ 0.03
TRAPPC12-216ENST00000469400 SMARCA5O60264 1052 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC12-216ENST00000469400 APPP05067 770 aa15.26■□□□□ 0.03
TRAPPC12-216ENST00000469400 CA3P07451 260 aa15.26■□□□□ 0.03
TRAPPC12-216ENST00000469400 PFKMP08237 780 aa15.26■□□□□ 0.03
TRAPPC12-216ENST00000469400 MS4A1P11836 297 aa15.26■□□□□ 0.03
TRAPPC12-216ENST00000469400 ALAS1P13196 640 aa15.26■□□□□ 0.03
TRAPPC12-216ENST00000469400 POU3F3P20264 500 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC12-216ENST00000469400 HNRNPUQ00839 825 aaKnown RBP eCLIP15.26■□□□□ 0.03
TRAPPC12-216ENST00000469400 TMEM67Q5HYA8 995 aa15.26■□□□□ 0.03
TRAPPC12-216ENST00000469400 FAM160B2Q86V87 743 aa15.26■□□□□ 0.03
TRAPPC12-216ENST00000469400 KBTBD3Q8NAB2 608 aa15.26■□□□□ 0.03
TRAPPC12-216ENST00000469400 NEDD1Q8NHV4 660 aa15.26■□□□□ 0.03
TRAPPC12-216ENST00000469400 CHURC1Q8WUH1 139 aa15.26■□□□□ 0.03
TRAPPC12-216ENST00000469400 CHMP4CQ96CF2 233 aa15.26■□□□□ 0.03
TRAPPC12-216ENST00000469400 LRRCC1Q9C099 1032 aa15.26■□□□□ 0.03
TRAPPC12-216ENST00000469400 CERS4Q9HA82 394 aa15.26■□□□□ 0.03
TRAPPC12-216ENST00000469400 TRMT13Q9NUP7 481 aaKnown RBP15.26■□□□□ 0.03
TRAPPC12-216ENST00000469400 CYP39A1Q9NYL5 469 aa15.26■□□□□ 0.03
TRAPPC12-216ENST00000469400 DDX19BQ9UMR2 479 aa15.26■□□□□ 0.03
TRAPPC12-216ENST00000469400 MYH7P12883 1935 aa15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 PLIN4Q96Q06 1357 aa15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 EPOPA6NHQ4 379 aa15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 RNF113AO15541 343 aaKnown RBP15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 GPAA1O43292 621 aa15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 GTPBP6O43824 516 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 SUPT20HL2P0C7V6 817 aa15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 TSPY3P0CV98 308 aa15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 TSPY8P0CW00 308 aa15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 CYP2C9P11712 490 aa15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 GNAT2P19087 354 aa15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 MCCP23508 829 aa15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 HOXD11P31277 338 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 SLC1A4P43007 532 aa15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 SNAP25P60880 206 aa15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 IKQ13123 557 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 MUM1L1Q5H9M0 696 aa15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 KIAA1211Q6ZU35 1233 aa15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 DEFB128Q7Z7B8 93 aa15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 GMCL1Q96IK5 515 aa15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 EPHX3Q9H6B9 360 aa15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 ECHDC1Q9NTX5 307 aa15.25■□□□□ 0.03
TRAPPC12-216ENST00000469400 TNKSO95271 1327 aa15.24■□□□□ 0.03
TRAPPC12-216ENST00000469400 MYH4Q9Y623 1939 aa15.24■□□□□ 0.03
TRAPPC12-216ENST00000469400 PATL2C9JE40 543 aaKnown RBP15.24■□□□□ 0.03
TRAPPC12-216ENST00000469400 TFAP4Q01664 338 aa15.24■□□□□ 0.03
TRAPPC12-216ENST00000469400 KRT40Q6A162 431 aa15.24■□□□□ 0.03
TRAPPC12-216ENST00000469400 IFNL3Q8IZI9 196 aa15.24■□□□□ 0.03
TRAPPC12-216ENST00000469400 MORC4Q8TE76 937 aa15.24■□□□□ 0.03
TRAPPC12-216ENST00000469400 PURBQ96QR8 312 aaKnown RBP15.24■□□□□ 0.03
TRAPPC12-216ENST00000469400 VTA1Q9NP79 307 aa15.24■□□□□ 0.03
TRAPPC12-216ENST00000469400 REV3LO60673 3130 aa15.24■□□□□ 0.03
TRAPPC12-216ENST00000469400 M0R2C6 588 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms