RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 SNAP25P60880 206 aa17.11■□□□□ 0.33
CRAMP1-206ENST00000468839 PTGDRQ13258 359 aa17.11■□□□□ 0.33
CRAMP1-206ENST00000468839 MTMR2Q13614 643 aa17.11■□□□□ 0.33
CRAMP1-206ENST00000468839 SH3D19Q5HYK7 790 aa17.11■□□□□ 0.33
CRAMP1-206ENST00000468839 ARL6IP4Q66PJ3 421 aaKnown RBP17.11■□□□□ 0.33
CRAMP1-206ENST00000468839 RBM43Q6ZSC3 357 aaKnown RBP17.11■□□□□ 0.33
CRAMP1-206ENST00000468839 KIFC2Q96AC6 838 aa17.11■□□□□ 0.33
CRAMP1-206ENST00000468839 CLIC6Q96NY7 704 aa17.11■□□□□ 0.33
CRAMP1-206ENST00000468839 SLF1Q9BQI6 1058 aa17.11■□□□□ 0.33
CRAMP1-206ENST00000468839 FBXO28Q9NVF7 368 aa17.11■□□□□ 0.33
CRAMP1-206ENST00000468839 TMEM260Q9NX78 707 aa17.11■□□□□ 0.33
CRAMP1-206ENST00000468839 SNCAIPQ9Y6H5 919 aa17.11■□□□□ 0.33
CRAMP1-206ENST00000468839 GOLGB1Q14789 3259 aaKnown RBP17.11■□□□□ 0.33
CRAMP1-206ENST00000468839 LAD1O00515 517 aa17.1■□□□□ 0.33
CRAMP1-206ENST00000468839 CTAGE5O15320 804 aa17.1■□□□□ 0.33
CRAMP1-206ENST00000468839 DLK2Q6UY11 383 aa17.1■□□□□ 0.33
CRAMP1-206ENST00000468839 NEK8Q86SG6 692 aa17.1■□□□□ 0.33
CRAMP1-206ENST00000468839 GAS2L3Q86XJ1 694 aa17.1■□□□□ 0.33
CRAMP1-206ENST00000468839 TBCKQ8TEA7 893 aa17.1■□□□□ 0.33
CRAMP1-206ENST00000468839 TIGD1Q96MW7 591 aa17.1■□□□□ 0.33
CRAMP1-206ENST00000468839 MEIS2O14770 477 aa17.09■□□□□ 0.33
CRAMP1-206ENST00000468839 FOSP01100 380 aaPredicted RBP17.09■□□□□ 0.33
CRAMP1-206ENST00000468839 PFKFB1P16118 471 aa17.09■□□□□ 0.33
CRAMP1-206ENST00000468839 VCAM1P19320 739 aa17.09■□□□□ 0.33
CRAMP1-206ENST00000468839 MCM7P33993 719 aa17.09■□□□□ 0.33
CRAMP1-206ENST00000468839 NDUFA8P51970 172 aa17.09■□□□□ 0.33
CRAMP1-206ENST00000468839 AP3B2Q13367 1082 aa17.09■□□□□ 0.33
CRAMP1-206ENST00000468839 PRKG1Q13976 671 aa17.09■□□□□ 0.33
CRAMP1-206ENST00000468839 VGLL4Q14135 290 aa17.09■□□□□ 0.33
CRAMP1-206ENST00000468839 EAPPQ56P03 285 aaPredicted RBP17.09■□□□□ 0.33
CRAMP1-206ENST00000468839 RBM46Q8TBY0 533 aaKnown RBP17.09■□□□□ 0.33
CRAMP1-206ENST00000468839 TNMDQ9H2S6 317 aa17.09■□□□□ 0.33
CRAMP1-206ENST00000468839 PNMA2Q9UL42 364 aa17.09■□□□□ 0.33
CRAMP1-206ENST00000468839 MRPL11Q9Y3B7 192 aaKnown RBP17.09■□□□□ 0.33
CRAMP1-206ENST00000468839 CSADQ9Y600 493 aa17.09■□□□□ 0.33
CRAMP1-206ENST00000468839 ABCB11O95342 1321 aa17.09■□□□□ 0.33
CRAMP1-206ENST00000468839 GOLGA6L3A6NEY3 463 aa17.08■□□□□ 0.32
CRAMP1-206ENST00000468839 PIK3CDO00329 1044 aa17.08■□□□□ 0.32
CRAMP1-206ENST00000468839 EDIL3O43854 480 aa17.08■□□□□ 0.32
CRAMP1-206ENST00000468839 KINO60870 393 aaKnown RBP17.08■□□□□ 0.32
CRAMP1-206ENST00000468839 ZNF202O95125 648 aa17.08■□□□□ 0.32
CRAMP1-206ENST00000468839 PRPHP41219 470 aa17.08■□□□□ 0.32
CRAMP1-206ENST00000468839 GRIN1Q05586 938 aa17.08■□□□□ 0.32
CRAMP1-206ENST00000468839 UBE2SQ16763 222 aa17.08■□□□□ 0.32
CRAMP1-206ENST00000468839 ANKRD13AQ8IZ07 590 aa17.08■□□□□ 0.32
CRAMP1-206ENST00000468839 NAP1L4Q99733 375 aaKnown RBP17.08■□□□□ 0.32
CRAMP1-206ENST00000468839 RPAP3Q9H6T3 665 aaPredicted RBP17.08■□□□□ 0.32
CRAMP1-206ENST00000468839 FAM13BQ9NYF5 915 aa17.08■□□□□ 0.32
CRAMP1-206ENST00000468839 PPP1R9AQ9ULJ8 1098 aa17.08■□□□□ 0.32
CRAMP1-206ENST00000468839 MRVI1Q9Y6F6 885 aa17.08■□□□□ 0.32
CRAMP1-206ENST00000468839 TRPM7Q96QT4 1865 aa17.07■□□□□ 0.32
CRAMP1-206ENST00000468839 ZNF536O15090 1300 aa17.07■□□□□ 0.32
CRAMP1-206ENST00000468839 OPLAHO14841 1288 aa17.07■□□□□ 0.32
CRAMP1-206ENST00000468839 ICAM1P05362 532 aa17.07■□□□□ 0.32
CRAMP1-206ENST00000468839 SYKP43405 635 aa17.07■□□□□ 0.32
CRAMP1-206ENST00000468839 USH1GQ495M9 461 aa17.07■□□□□ 0.32
CRAMP1-206ENST00000468839 PPP4R3AQ6IN85 833 aa17.07■□□□□ 0.32
CRAMP1-206ENST00000468839 LDHDQ86WU2 507 aa17.07■□□□□ 0.32
CRAMP1-206ENST00000468839 ELOA2Q8IYF1 753 aaPredicted RBP17.07■□□□□ 0.32
CRAMP1-206ENST00000468839 FUCA2Q9BTY2 467 aa17.07■□□□□ 0.32
CRAMP1-206ENST00000468839 CSRNP2Q9H175 543 aa17.07■□□□□ 0.32
CRAMP1-206ENST00000468839 SLC38A10Q9HBR0 1119 aa17.07■□□□□ 0.32
CRAMP1-206ENST00000468839 UNCXA6NJT0 531 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 USP17L15C9J2P7 530 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 USP17L13C9JLJ4 530 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 USP17L11C9JVI0 530 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 USP17L18D6R9N7 530 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 USP17L22D6RA61 530 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 USP17L17D6RBQ6 530 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 USP17L19D6RCP7 530 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 USP17L20D6RJB6 530 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 USP11P51784 963 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 HMGCS2P54868 508 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 PPATQ06203 517 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 USP17L24Q0WX57 530 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 DGKZQ13574 1117 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 LETM2Q2VYF4 491 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 CCDC174Q6PII3 467 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 USP17L6PQ6QN14 398 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 ARMC9Q7Z3E5 817 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 ERO1BQ86YB8 467 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 SAMD3Q8N6K7 520 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 ANO3Q9BYT9 981 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 TANGO6Q9C0B7 1094 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 TMOD4Q9NZQ9 345 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 ADAMTS5Q9UNA0 930 aa17.06■□□□□ 0.32
CRAMP1-206ENST00000468839 MYPNQ86TC9 1320 aa17.05■□□□□ 0.32
CRAMP1-206ENST00000468839 CXCL11O14625 94 aa17.05■□□□□ 0.32
CRAMP1-206ENST00000468839 CCNT1O60563 726 aaKnown RBP17.05■□□□□ 0.32
CRAMP1-206ENST00000468839 ZBED4O75132 1171 aa17.05■□□□□ 0.32
CRAMP1-206ENST00000468839 FLOT1O75955 427 aa17.05■□□□□ 0.32
CRAMP1-206ENST00000468839 GCFC2P16383 781 aaKnown RBP17.05■□□□□ 0.32
CRAMP1-206ENST00000468839 DSG3P32926 999 aa17.05■□□□□ 0.32
CRAMP1-206ENST00000468839 LONP1P36776 959 aaKnown RBP17.05■□□□□ 0.32
CRAMP1-206ENST00000468839 IL17AQ16552 155 aa17.05■□□□□ 0.32
CRAMP1-206ENST00000468839 CAMK4Q16566 473 aa17.05■□□□□ 0.32
CRAMP1-206ENST00000468839 L1TD1Q5T7N2 865 aaKnown RBP17.05■□□□□ 0.32
CRAMP1-206ENST00000468839 MOXD1Q6UVY6 613 aa17.05■□□□□ 0.32
CRAMP1-206ENST00000468839 CATSPERGQ6ZRH7 1159 aa17.05■□□□□ 0.32
CRAMP1-206ENST00000468839 CRYGNQ8WXF5 182 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms