RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 GRM4Q14833 912 aa17.7■□□□□ 0.42
TSPAN4-211ENST00000468468 TSR1Q2NL82 804 aaKnown RBP17.7■□□□□ 0.42
TSPAN4-211ENST00000468468 C12orf60Q5U649 245 aa17.7■□□□□ 0.42
TSPAN4-211ENST00000468468 THAP9Q9H5L6 903 aa17.7■□□□□ 0.42
TSPAN4-211ENST00000468468 MAGEC2Q9UBF1 373 aaPredicted RBP17.7■□□□□ 0.42
TSPAN4-211ENST00000468468 MAD2L2Q9UI95 211 aa17.7■□□□□ 0.42
TSPAN4-211ENST00000468468 KIAA1551Q9HCM1 1747 aa17.7■□□□□ 0.42
TSPAN4-211ENST00000468468 A0A1W2PQC6 194 aa17.7■□□□□ 0.42
TSPAN4-211ENST00000468468 PSMA7O14818 248 aa17.7■□□□□ 0.42
TSPAN4-211ENST00000468468 GNAQP50148 359 aa17.7■□□□□ 0.42
TSPAN4-211ENST00000468468 AMPD2Q01433 879 aa17.7■□□□□ 0.42
TSPAN4-211ENST00000468468 HEATR3Q7Z4Q2 680 aa17.7■□□□□ 0.42
TSPAN4-211ENST00000468468 PROM2Q8N271 834 aa17.7■□□□□ 0.42
TSPAN4-211ENST00000468468 ZNF507Q8TCN5 953 aa17.7■□□□□ 0.42
TSPAN4-211ENST00000468468 MKNK2Q9HBH9 465 aa17.7■□□□□ 0.42
TSPAN4-211ENST00000468468 PDE11AQ9HCR9 933 aa17.7■□□□□ 0.42
TSPAN4-211ENST00000468468 L1RE1Q9UN81 338 aa17.7■□□□□ 0.42
TSPAN4-211ENST00000468468 USP17L3A6NCW0 530 aa17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 USP17L4A6NCW7 530 aa17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 VSNL1P62760 191 aa17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 DIXDC1Q155Q3 683 aa17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 CRY2Q49AN0 593 aa17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 SLC27A3Q5K4L6 730 aa17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 NCAPH2Q6IBW4 605 aa17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 USP17L1Q7RTZ2 530 aa17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 DNAJC7Q99615 494 aa17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 CCSER1Q9C0I3 900 aa17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 SUGCTQ9HAC7 445 aa17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 CAPN11Q9UMQ6 739 aa17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 RHOBTB3O94955 611 aa17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 LDHBP07195 334 aaKnown RBP17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 SLC35G1Q2M3R5 365 aa17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 NOA1Q8NC60 698 aaKnown RBP17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 CCDC148Q8NFR7 591 aa17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 HAUS4Q9H6D7 363 aa17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 KBTBD4Q9NVX7 518 aa17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 ADAM21Q9UKJ8 722 aa17.69■□□□□ 0.42
TSPAN4-211ENST00000468468 UFL1O94874 794 aa17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 SPTY2D1Q68D10 685 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 GIMAP8Q8ND71 665 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 ANKS1AQ92625 1134 aa17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 CYTH3O43739 400 aa17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 MYL1P05976 194 aa17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 WDR59Q6PJI9 974 aa17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 DAGLBQ8NCG7 672 aa17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 FEZ2Q9UHY8 353 aaPredicted RBP17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 B4DLN1 442 aa17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 TSPY3P0CV98 308 aa17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 TSPY8P0CW00 308 aa17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 DNM2P50570 870 aa17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 TXNRD1Q16881 649 aa17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 TTI2Q6NXR4 508 aa17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 ZNF804AQ7Z570 1209 aa17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 WDR66Q8TBY9 1149 aa17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 LRRC15Q8TF66 581 aa17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 BARHL2Q9NY43 387 aa17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 MKRN1Q9UHC7 482 aaKnown RBP17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 TFR2Q9UP52 801 aa17.68■□□□□ 0.42
TSPAN4-211ENST00000468468 BRWD3Q6RI45 1802 aa17.67■□□□□ 0.42
TSPAN4-211ENST00000468468 STXBP3O00186 592 aa17.67■□□□□ 0.42
TSPAN4-211ENST00000468468 ENC1O14682 589 aa17.67■□□□□ 0.42
TSPAN4-211ENST00000468468 EIF3JO75822 258 aaKnown RBP17.67■□□□□ 0.42
TSPAN4-211ENST00000468468 HERVK_113P62684 666 aa17.67■□□□□ 0.42
TSPAN4-211ENST00000468468 CCDC122Q5T0U0 273 aa17.67■□□□□ 0.42
TSPAN4-211ENST00000468468 GALNT17Q6IS24 598 aa17.67■□□□□ 0.42
TSPAN4-211ENST00000468468 SH3RF3Q8TEJ3 882 aaPredicted RBP17.67■□□□□ 0.42
TSPAN4-211ENST00000468468 GBP3Q9H0R5 595 aa17.67■□□□□ 0.42
TSPAN4-211ENST00000468468 TMED8Q6PL24 325 aaPredicted RBP17.67■□□□□ 0.42
TSPAN4-211ENST00000468468 CSGALNACT2Q8N6G5 542 aa17.67■□□□□ 0.42
TSPAN4-211ENST00000468468 NOC3LQ8WTT2 800 aaKnown RBP17.67■□□□□ 0.42
TSPAN4-211ENST00000468468 SECISBP2LQ93073 1101 aaKnown RBP17.67■□□□□ 0.42
TSPAN4-211ENST00000468468 EXOC4Q96A65 974 aa17.67■□□□□ 0.42
TSPAN4-211ENST00000468468 EEF2KMTQ96G04 330 aa17.67■□□□□ 0.42
TSPAN4-211ENST00000468468 DHTKD1Q96HY7 919 aaPredicted RBP17.67■□□□□ 0.42
TSPAN4-211ENST00000468468 TUBGCP2Q9BSJ2 902 aa17.67■□□□□ 0.42
TSPAN4-211ENST00000468468 POLRMTO00411 1230 aaKnown RBP17.66■□□□□ 0.42
TSPAN4-211ENST00000468468 PSMD14O00487 310 aa17.66■□□□□ 0.42
TSPAN4-211ENST00000468468 LAD1O00515 517 aa17.66■□□□□ 0.42
TSPAN4-211ENST00000468468 CCDC178Q5BJE1 867 aa17.66■□□□□ 0.42
TSPAN4-211ENST00000468468 TRAPPC11Q7Z392 1133 aa17.66■□□□□ 0.42
TSPAN4-211ENST00000468468 CABP7Q86V35 215 aa17.66■□□□□ 0.42
TSPAN4-211ENST00000468468 ZNF444Q8N0Y2 327 aaPredicted RBP17.66■□□□□ 0.42
TSPAN4-211ENST00000468468 RBM17Q96I25 401 aaKnown RBP17.66■□□□□ 0.42
TSPAN4-211ENST00000468468 DUSP9Q99956 384 aaKnown RBP17.66■□□□□ 0.42
TSPAN4-211ENST00000468468 EXOC1Q9NV70 894 aa17.66■□□□□ 0.42
TSPAN4-211ENST00000468468 HDAC6Q9UBN7 1215 aa17.66■□□□□ 0.42
TSPAN4-211ENST00000468468 STX8Q9UNK0 236 aa17.66■□□□□ 0.42
TSPAN4-211ENST00000468468 TUBBP07437 444 aa17.66■□□□□ 0.42
TSPAN4-211ENST00000468468 SRGNP10124 158 aa17.66■□□□□ 0.42
TSPAN4-211ENST00000468468 PLCG1P19174 1290 aa17.66■□□□□ 0.42
TSPAN4-211ENST00000468468 PRPHP41219 470 aa17.66■□□□□ 0.42
TSPAN4-211ENST00000468468 VPS18Q9P253 973 aa17.66■□□□□ 0.42
TSPAN4-211ENST00000468468 GOLGA8HP0CJ92 632 aa17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 LMAN1P49257 510 aa17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 KRT83P78385 493 aa17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 SEMA3FQ13275 785 aa17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 CASP8Q14790 479 aa17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 CCDC88AQ3V6T2 1871 aa17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 KIAA1328Q86T90 577 aa17.65■□□□□ 0.42
TSPAN4-211ENST00000468468 AMOTL1Q8IY63 956 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms