RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 TKFCQ3LXA3 575 aa17.41■□□□□ 0.38
ATPAF2-204ENST00000467560 SYDE2Q5VT97 1194 aa17.41■□□□□ 0.38
ATPAF2-204ENST00000467560 DEFB123Q8N688 67 aa17.41■□□□□ 0.38
ATPAF2-204ENST00000467560 TSEN34Q9BSV6 310 aaKnown RBP17.41■□□□□ 0.38
ATPAF2-204ENST00000467560 UPF3AQ9H1J1 476 aaKnown RBP17.41■□□□□ 0.38
ATPAF2-204ENST00000467560 NFIBO00712 420 aa17.4■□□□□ 0.38
ATPAF2-204ENST00000467560 C6orf222P0C671 652 aaPredicted RBP17.4■□□□□ 0.38
ATPAF2-204ENST00000467560 EPHB4P54760 987 aa17.4■□□□□ 0.38
ATPAF2-204ENST00000467560 GJA9P57773 515 aa17.4■□□□□ 0.38
ATPAF2-204ENST00000467560 IRX6P78412 446 aaPredicted RBP17.4■□□□□ 0.38
ATPAF2-204ENST00000467560 SHHQ15465 462 aa17.4■□□□□ 0.38
ATPAF2-204ENST00000467560 GPR153Q6NV75 609 aa17.4■□□□□ 0.38
ATPAF2-204ENST00000467560 CPVLQ9H3G5 476 aa17.4■□□□□ 0.38
ATPAF2-204ENST00000467560 PDGFCQ9NRA1 345 aa17.4■□□□□ 0.38
ATPAF2-204ENST00000467560 LCTP09848 1927 aa17.4■□□□□ 0.38
ATPAF2-204ENST00000467560 ASGR1P07306 291 aa17.39■□□□□ 0.37
ATPAF2-204ENST00000467560 CLTBP09497 229 aa17.39■□□□□ 0.37
ATPAF2-204ENST00000467560 SNHG28P0DPA3 235 aa17.39■□□□□ 0.37
ATPAF2-204ENST00000467560 GSPT1P15170 499 aaKnown RBP17.39■□□□□ 0.37
ATPAF2-204ENST00000467560 CST5P28325 142 aaPredicted RBP17.39■□□□□ 0.37
ATPAF2-204ENST00000467560 BEX3Q00994 111 aa17.39■□□□□ 0.37
ATPAF2-204ENST00000467560 ZNF543Q08ER8 600 aa17.39■□□□□ 0.37
ATPAF2-204ENST00000467560 FAAP100Q0VG06 881 aa17.39■□□□□ 0.37
ATPAF2-204ENST00000467560 NSMFQ6X4W1 530 aa17.39■□□□□ 0.37
ATPAF2-204ENST00000467560 EEPD1Q7L9B9 569 aa17.39■□□□□ 0.37
ATPAF2-204ENST00000467560 STARD7Q9NQZ5 370 aa17.39■□□□□ 0.37
ATPAF2-204ENST00000467560 DIAPH3Q9NSV4 1193 aa17.39■□□□□ 0.37
ATPAF2-204ENST00000467560 CDH23Q9H251 3354 aa17.39■□□□□ 0.37
ATPAF2-204ENST00000467560 MOXD2PA6NHM9 499 aa17.38■□□□□ 0.37
ATPAF2-204ENST00000467560 GOLGA8HP0CJ92 632 aa17.38■□□□□ 0.37
ATPAF2-204ENST00000467560 SMPD1P17405 629 aa17.38■□□□□ 0.37
ATPAF2-204ENST00000467560 BAATQ14032 418 aaPredicted RBP17.38■□□□□ 0.37
ATPAF2-204ENST00000467560 TAPT1Q6NXT6 567 aa17.38■□□□□ 0.37
ATPAF2-204ENST00000467560 ANKRD33Q7Z3H0 272 aa17.38■□□□□ 0.37
ATPAF2-204ENST00000467560 FBXO16Q8IX29 292 aaPredicted RBP17.38■□□□□ 0.37
ATPAF2-204ENST00000467560 CLEC4DQ8WXI8 215 aa17.38■□□□□ 0.37
ATPAF2-204ENST00000467560 MTMR10Q9NXD2 777 aa17.38■□□□□ 0.37
ATPAF2-204ENST00000467560 GNEQ9Y223 722 aaKnown RBP17.38■□□□□ 0.37
ATPAF2-204ENST00000467560 LRRC37A2A6NM11 1700 aa17.38■□□□□ 0.37
ATPAF2-204ENST00000467560 ASB14A6NK59 587 aa17.37■□□□□ 0.37
ATPAF2-204ENST00000467560 ZNF213O14771 459 aa17.37■□□□□ 0.37
ATPAF2-204ENST00000467560 KIAA0355O15063 1070 aa17.37■□□□□ 0.37
ATPAF2-204ENST00000467560 KDM4AO75164 1064 aa17.37■□□□□ 0.37
ATPAF2-204ENST00000467560 PCP11498 1178 aaKnown RBP17.37■□□□□ 0.37
ATPAF2-204ENST00000467560 CDK7P50613 346 aa17.37■□□□□ 0.37
ATPAF2-204ENST00000467560 MFAP1P55081 439 aaKnown RBP17.37■□□□□ 0.37
ATPAF2-204ENST00000467560 TNFAIP2Q03169 654 aa17.37■□□□□ 0.37
ATPAF2-204ENST00000467560 GNASQ5JWF2 1037 aa17.37■□□□□ 0.37
ATPAF2-204ENST00000467560 SLC30A10Q6XR72 485 aa17.37■□□□□ 0.37
ATPAF2-204ENST00000467560 ESR2Q92731 530 aa17.37■□□□□ 0.37
ATPAF2-204ENST00000467560 TTC14Q96N46 770 aa17.37■□□□□ 0.37
ATPAF2-204ENST00000467560 B4E1Z4 1266 aa17.36■□□□□ 0.37
ATPAF2-204ENST00000467560 NKX3-2P78367 333 aa17.36■□□□□ 0.37
ATPAF2-204ENST00000467560 MORC4Q8TE76 937 aa17.36■□□□□ 0.37
ATPAF2-204ENST00000467560 NUP133Q8WUM0 1156 aa17.36■□□□□ 0.37
ATPAF2-204ENST00000467560 TOX2Q96NM4 488 aa17.36■□□□□ 0.37
ATPAF2-204ENST00000467560 UBA5Q9GZZ9 404 aa17.36■□□□□ 0.37
ATPAF2-204ENST00000467560 RNF41Q9H4P4 317 aaPredicted RBP17.36■□□□□ 0.37
ATPAF2-204ENST00000467560 TMEM39AQ9NV64 488 aa17.36■□□□□ 0.37
ATPAF2-204ENST00000467560 NOL8Q76FK4 1167 aaKnown RBP17.35■□□□□ 0.37
ATPAF2-204ENST00000467560 DGKHQ86XP1 1220 aa17.35■□□□□ 0.37
ATPAF2-204ENST00000467560 PCSK9Q8NBP7 692 aaKnown RBP17.35■□□□□ 0.37
ATPAF2-204ENST00000467560 GLT1D1Q96MS3 346 aa17.35■□□□□ 0.37
ATPAF2-204ENST00000467560 DSCC1Q9BVC3 393 aa17.35■□□□□ 0.37
ATPAF2-204ENST00000467560 ZSWIM5Q9P217 1185 aa17.35■□□□□ 0.37
ATPAF2-204ENST00000467560 TBX21Q9UL17 535 aa17.35■□□□□ 0.37
ATPAF2-204ENST00000467560 ELP1O95163 1332 aa17.35■□□□□ 0.37
ATPAF2-204ENST00000467560 LAMA4Q16363 1823 aa17.35■□□□□ 0.37
ATPAF2-204ENST00000467560 CUL9Q8IWT3 2517 aa17.35■□□□□ 0.37
ATPAF2-204ENST00000467560 GRIN2DO15399 1336 aa17.34■□□□□ 0.37
ATPAF2-204ENST00000467560 DYNC1LI2O43237 492 aaPredicted RBP17.34■□□□□ 0.37
ATPAF2-204ENST00000467560 ALDH5A1P51649 535 aaPredicted RBP17.34■□□□□ 0.37
ATPAF2-204ENST00000467560 TTC22Q5TAA0 569 aa17.34■□□□□ 0.37
ATPAF2-204ENST00000467560 CXCL17Q6UXB2 119 aa17.34■□□□□ 0.37
ATPAF2-204ENST00000467560 TLK2Q86UE8 772 aa17.34■□□□□ 0.37
ATPAF2-204ENST00000467560 ENAHQ8N8S7 591 aaPredicted RBP17.34■□□□□ 0.37
ATPAF2-204ENST00000467560 ANKS1AQ92625 1134 aa17.34■□□□□ 0.37
ATPAF2-204ENST00000467560 FAM161BQ96MY7 647 aa17.34■□□□□ 0.37
ATPAF2-204ENST00000467560 GUCD1Q96NT3 240 aa17.34■□□□□ 0.37
ATPAF2-204ENST00000467560 ZSCAN10Q96SZ4 725 aaPredicted RBP17.34■□□□□ 0.37
ATPAF2-204ENST00000467560 PTPDC1A2A3K4 754 aa17.33■□□□□ 0.36
ATPAF2-204ENST00000467560 HIP1O00291 1037 aa17.33■□□□□ 0.36
ATPAF2-204ENST00000467560 RAG1P15918 1043 aa17.33■□□□□ 0.36
ATPAF2-204ENST00000467560 CALML3P27482 149 aa17.33■□□□□ 0.36
ATPAF2-204ENST00000467560 FSCN1Q16658 493 aaKnown RBP17.33■□□□□ 0.36
ATPAF2-204ENST00000467560 FAM126BQ8IXS8 530 aa17.33■□□□□ 0.36
ATPAF2-204ENST00000467560 PNMA1Q8ND90 353 aa17.33■□□□□ 0.36
ATPAF2-204ENST00000467560 VTI1AQ96AJ9 217 aa17.33■□□□□ 0.36
ATPAF2-204ENST00000467560 SPC25Q9HBM1 224 aa17.33■□□□□ 0.36
ATPAF2-204ENST00000467560 TAF6LQ9Y6J9 622 aa17.33■□□□□ 0.36
ATPAF2-204ENST00000467560 TNKSO95271 1327 aa17.32■□□□□ 0.36
ATPAF2-204ENST00000467560 UNC80Q8N2C7 3258 aa17.32■□□□□ 0.36
ATPAF2-204ENST00000467560 A0A0U1RQG5 324 aaPredicted RBP17.32■□□□□ 0.36
ATPAF2-204ENST00000467560 DCDC2CA8MYV0 355 aa17.32■□□□□ 0.36
ATPAF2-204ENST00000467560 ARVCFO00192 962 aa17.32■□□□□ 0.36
ATPAF2-204ENST00000467560 RPS6P62753 249 aaKnown RBP17.32■□□□□ 0.36
ATPAF2-204ENST00000467560 USH1GQ495M9 461 aa17.32■□□□□ 0.36
ATPAF2-204ENST00000467560 KIAA1211Q6ZU35 1233 aa17.32■□□□□ 0.36
ATPAF2-204ENST00000467560 C16orf59Q7L2K0 433 aa17.32■□□□□ 0.36
ATPAF2-204ENST00000467560 TBC1D5Q92609 795 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms