RNA–Protein interactions for RNA: ENST00000467505.5

RB1-202, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-202ENST00000467505 NT5C2P49902 561 aa16.98■□□□□ 0.31
RB1-202ENST00000467505 CHMP4CQ96CF2 233 aa16.98■□□□□ 0.31
RB1-202ENST00000467505 FAM227BQ96M60 508 aa16.98■□□□□ 0.31
RB1-202ENST00000467505 TTC14Q96N46 770 aa16.98■□□□□ 0.31
RB1-202ENST00000467505 GUCD1Q96NT3 240 aa16.98■□□□□ 0.31
RB1-202ENST00000467505 MPHOSPH6Q99547 160 aaKnown RBP16.98■□□□□ 0.31
RB1-202ENST00000467505 SEZ6LQ9BYH1 1024 aa16.98■□□□□ 0.31
RB1-202ENST00000467505 KATNBL1Q9H079 304 aa16.98■□□□□ 0.31
RB1-202ENST00000467505 RWDD1Q9H446 243 aaPredicted RBP16.98■□□□□ 0.31
RB1-202ENST00000467505 RNF41Q9H4P4 317 aaPredicted RBP16.98■□□□□ 0.31
RB1-202ENST00000467505 INCENPQ9NQS7 918 aa16.98■□□□□ 0.31
RB1-202ENST00000467505 CCDC171Q6TFL3 1326 aa16.97■□□□□ 0.31
RB1-202ENST00000467505 LOC102724159A0A0B4J2E5 919 aa16.97■□□□□ 0.31
RB1-202ENST00000467505 A0A0D9SFI3 127 aa16.97■□□□□ 0.31
RB1-202ENST00000467505 SOWAHBA6NEL2 793 aa16.97■□□□□ 0.31
RB1-202ENST00000467505 ADCY6O43306 1168 aa16.97■□□□□ 0.31
RB1-202ENST00000467505 HSPD1P10809 573 aaKnown RBP16.97■□□□□ 0.31
RB1-202ENST00000467505 ITGB8P26012 769 aa16.97■□□□□ 0.31
RB1-202ENST00000467505 CDK7P50613 346 aa16.97■□□□□ 0.31
RB1-202ENST00000467505 PPIGQ13427 754 aaKnown RBP eCLIP16.97■□□□□ 0.31
RB1-202ENST00000467505 PWP2Q15269 919 aaKnown RBP16.97■□□□□ 0.31
RB1-202ENST00000467505 SYDE2Q5VT97 1194 aa16.97■□□□□ 0.31
RB1-202ENST00000467505 IQSEC1Q6DN90 963 aa16.97■□□□□ 0.31
RB1-202ENST00000467505 MFSD5Q6N075 450 aa16.97■□□□□ 0.31
RB1-202ENST00000467505 NSMFQ6X4W1 530 aa16.97■□□□□ 0.31
RB1-202ENST00000467505 MFSD6Q6ZSS7 791 aa16.97■□□□□ 0.31
RB1-202ENST00000467505 TLK2Q86UE8 772 aa16.97■□□□□ 0.31
RB1-202ENST00000467505 TMEM199Q8N511 208 aa16.97■□□□□ 0.31
RB1-202ENST00000467505 RILPL2Q969X0 211 aa16.97■□□□□ 0.31
RB1-202ENST00000467505 RANBP17Q9H2T7 1088 aaKnown RBP16.97■□□□□ 0.31
RB1-202ENST00000467505 VTA1Q9NP79 307 aa16.97■□□□□ 0.31
RB1-202ENST00000467505 CYP39A1Q9NYL5 469 aa16.97■□□□□ 0.31
RB1-202ENST00000467505 TBX21Q9UL17 535 aa16.97■□□□□ 0.31
RB1-202ENST00000467505 NMIQ13287 307 aaPredicted RBP16.96■□□□□ 0.31
RB1-202ENST00000467505 BTNL9Q6UXG8 535 aa16.96■□□□□ 0.31
RB1-202ENST00000467505 TMEM47Q9BQJ4 181 aa16.96■□□□□ 0.31
RB1-202ENST00000467505 LNPKQ9C0E8 428 aa16.96■□□□□ 0.31
RB1-202ENST00000467505 SEMA6BQ9H3T3 888 aa16.96■□□□□ 0.31
RB1-202ENST00000467505 Q9Y3F1 56 aa16.96■□□□□ 0.31
RB1-202ENST00000467505 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.95■□□□□ 0.3
RB1-202ENST00000467505 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.95■□□□□ 0.3
RB1-202ENST00000467505 SNAP25P60880 206 aa16.95■□□□□ 0.3
RB1-202ENST00000467505 FSCN1Q16658 493 aaKnown RBP16.95■□□□□ 0.3
RB1-202ENST00000467505 MUM1L1Q5H9M0 696 aa16.95■□□□□ 0.3
RB1-202ENST00000467505 AKNAD1Q5T1N1 836 aa16.95■□□□□ 0.3
RB1-202ENST00000467505 CDX2Q99626 313 aaPredicted RBP16.95■□□□□ 0.3
RB1-202ENST00000467505 GNEQ9Y223 722 aaKnown RBP16.95■□□□□ 0.3
RB1-202ENST00000467505 LAMA2P24043 3122 aaKnown RBP16.94■□□□□ 0.3
RB1-202ENST00000467505 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.94■□□□□ 0.3
RB1-202ENST00000467505 B4DLN1 442 aa16.94■□□□□ 0.3
RB1-202ENST00000467505 HIP1O00291 1037 aa16.94■□□□□ 0.3
RB1-202ENST00000467505 MRPL12P52815 198 aaKnown RBP16.94■□□□□ 0.3
RB1-202ENST00000467505 EPHB4P54760 987 aa16.94■□□□□ 0.3
RB1-202ENST00000467505 CCDC178Q5BJE1 867 aa16.94■□□□□ 0.3
RB1-202ENST00000467505 PSRC1Q6PGN9 363 aaPredicted RBP16.94■□□□□ 0.3
RB1-202ENST00000467505 FAM126BQ8IXS8 530 aa16.94■□□□□ 0.3
RB1-202ENST00000467505 SMC5Q8IY18 1101 aa16.94■□□□□ 0.3
RB1-202ENST00000467505 MORC4Q8TE76 937 aa16.94■□□□□ 0.3
RB1-202ENST00000467505 ESR2Q92731 530 aa16.94■□□□□ 0.3
RB1-202ENST00000467505 GPCPD1Q9NPB8 672 aa16.94■□□□□ 0.3
RB1-202ENST00000467505 LCTP09848 1927 aa16.94■□□□□ 0.3
RB1-202ENST00000467505 FRMPD2Q68DX3 1309 aaPredicted RBP16.94■□□□□ 0.3
RB1-202ENST00000467505 LAMA4Q16363 1823 aa16.93■□□□□ 0.3
RB1-202ENST00000467505 PTPDC1A2A3K4 754 aa16.93■□□□□ 0.3
RB1-202ENST00000467505 ZNF213O14771 459 aa16.93■□□□□ 0.3
RB1-202ENST00000467505 DYNC1LI2O43237 492 aaPredicted RBP16.93■□□□□ 0.3
RB1-202ENST00000467505 PDHBP11177 359 aa16.93■□□□□ 0.3
RB1-202ENST00000467505 SLC16A2P36021 539 aa16.93■□□□□ 0.3
RB1-202ENST00000467505 HAND2P61296 217 aa16.93■□□□□ 0.3
RB1-202ENST00000467505 IRX5P78411 483 aaPredicted RBP16.93■□□□□ 0.3
RB1-202ENST00000467505 BEX3Q00994 111 aa16.93■□□□□ 0.3
RB1-202ENST00000467505 BAATQ14032 418 aaPredicted RBP16.93■□□□□ 0.3
RB1-202ENST00000467505 GPATCH4Q5T3I0 446 aaKnown RBP16.93■□□□□ 0.3
RB1-202ENST00000467505 TTBK2Q6IQ55 1244 aa16.93■□□□□ 0.3
RB1-202ENST00000467505 CXCL17Q6UXB2 119 aa16.93■□□□□ 0.3
RB1-202ENST00000467505 KIAA1211Q6ZU35 1233 aa16.93■□□□□ 0.3
RB1-202ENST00000467505 EEPD1Q7L9B9 569 aa16.93■□□□□ 0.3
RB1-202ENST00000467505 RASGRP2Q7LDG7 609 aa16.93■□□□□ 0.3
RB1-202ENST00000467505 ZNF589Q86UQ0 364 aaPredicted RBP16.93■□□□□ 0.3
RB1-202ENST00000467505 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.93■□□□□ 0.3
RB1-202ENST00000467505 FBXO16Q8IX29 292 aaPredicted RBP16.93■□□□□ 0.3
RB1-202ENST00000467505 MTIF3Q9H2K0 278 aaKnown RBP16.93■□□□□ 0.3
RB1-202ENST00000467505 WDR19Q8NEZ3 1342 aa16.93■□□□□ 0.3
RB1-202ENST00000467505 CTAGE5O15320 804 aa16.92■□□□□ 0.3
RB1-202ENST00000467505 SMPD1P17405 629 aa16.92■□□□□ 0.3
RB1-202ENST00000467505 SDSP20132 328 aa16.92■□□□□ 0.3
RB1-202ENST00000467505 ALDH5A1P51649 535 aaPredicted RBP16.92■□□□□ 0.3
RB1-202ENST00000467505 ITGA7Q13683 1181 aa16.92■□□□□ 0.3
RB1-202ENST00000467505 BRDTQ58F21 947 aaPredicted RBP16.92■□□□□ 0.3
RB1-202ENST00000467505 B4GALNT3Q6L9W6 998 aa16.92■□□□□ 0.3
RB1-202ENST00000467505 TAPT1Q6NXT6 567 aa16.92■□□□□ 0.3
RB1-202ENST00000467505 RNF207Q6ZRF8 634 aa16.92■□□□□ 0.3
RB1-202ENST00000467505 CHD1LQ86WJ1 897 aa16.92■□□□□ 0.3
RB1-202ENST00000467505 IQCA1Q86XH1 822 aa16.92■□□□□ 0.3
RB1-202ENST00000467505 SLC43A3Q8NBI5 491 aa16.92■□□□□ 0.3
RB1-202ENST00000467505 PPP1R12CQ9BZL4 782 aa16.92■□□□□ 0.3
RB1-202ENST00000467505 OSBPL3Q9H4L5 887 aa16.92■□□□□ 0.3
RB1-202ENST00000467505 DIAPH3Q9NSV4 1193 aa16.92■□□□□ 0.3
RB1-202ENST00000467505 POLR3EQ9NVU0 708 aa16.92■□□□□ 0.3
RB1-202ENST00000467505 ASTN1O14525 1302 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms