RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 TNMDQ9H2S6 317 aa10.89□□□□□ -0.67
SRPRB-202ENST00000466636 TSPY26PQ9H489 355 aa10.89□□□□□ -0.67
SRPRB-202ENST00000466636 GRPEL1Q9HAV7 217 aa10.89□□□□□ -0.67
SRPRB-202ENST00000466636 DICER1Q9UPY3 1922 aaKnown RBP10.88□□□□□ -0.67
SRPRB-202ENST00000466636 CTAGE5O15320 804 aa10.88□□□□□ -0.67
SRPRB-202ENST00000466636 GRIN3BO60391 1043 aa10.88□□□□□ -0.67
SRPRB-202ENST00000466636 KINO60870 393 aaKnown RBP10.88□□□□□ -0.67
SRPRB-202ENST00000466636 STAT2P52630 851 aa10.88□□□□□ -0.67
SRPRB-202ENST00000466636 IKQ13123 557 aaPredicted RBP10.88□□□□□ -0.67
SRPRB-202ENST00000466636 PTGDRQ13258 359 aa10.88□□□□□ -0.67
SRPRB-202ENST00000466636 SUPT20HL1Q3ZLR7 823 aa10.88□□□□□ -0.67
SRPRB-202ENST00000466636 JAKMIP3Q5VZ66 844 aa10.88□□□□□ -0.67
SRPRB-202ENST00000466636 DPY19L2Q6NUT2 758 aa10.88□□□□□ -0.67
SRPRB-202ENST00000466636 USP50Q70EL3 339 aaPredicted RBP10.88□□□□□ -0.67
SRPRB-202ENST00000466636 FBXO11Q86XK2 927 aa10.88□□□□□ -0.67
SRPRB-202ENST00000466636 CHURC1Q8WUH1 139 aa10.88□□□□□ -0.67
SRPRB-202ENST00000466636 KLRG1Q96E93 195 aa10.88□□□□□ -0.67
SRPRB-202ENST00000466636 WRNIP1Q96S55 665 aa10.88□□□□□ -0.67
SRPRB-202ENST00000466636 FEZ1Q99689 392 aa10.88□□□□□ -0.67
SRPRB-202ENST00000466636 AMNQ9BXJ7 453 aa10.88□□□□□ -0.67
SRPRB-202ENST00000466636 RANBP17Q9H2T7 1088 aaKnown RBP10.88□□□□□ -0.67
SRPRB-202ENST00000466636 BIN2Q9UBW5 565 aaPredicted RBP10.88□□□□□ -0.67
SRPRB-202ENST00000466636 FEM1BQ9UK73 627 aa10.88□□□□□ -0.67
SRPRB-202ENST00000466636 PCDHA1Q9Y5I3 950 aa10.88□□□□□ -0.67
SRPRB-202ENST00000466636 MYH8P13535 1937 aa10.88□□□□□ -0.67
SRPRB-202ENST00000466636 ADM5C9JUS6 153 aa10.87□□□□□ -0.67
SRPRB-202ENST00000466636 WDR46O15213 610 aaKnown RBP10.87□□□□□ -0.67
SRPRB-202ENST00000466636 EDIL3O43854 480 aa10.87□□□□□ -0.67
SRPRB-202ENST00000466636 ZNF202O95125 648 aa10.87□□□□□ -0.67
SRPRB-202ENST00000466636 XRCC6P12956 609 aaKnown RBP eCLIP10.87□□□□□ -0.67
SRPRB-202ENST00000466636 PTPRAP18433 802 aa10.87□□□□□ -0.67
SRPRB-202ENST00000466636 MCM7P33993 719 aa10.87□□□□□ -0.67
SRPRB-202ENST00000466636 MRPL12P52815 198 aaKnown RBP10.87□□□□□ -0.67
SRPRB-202ENST00000466636 ORC2Q13416 577 aaPredicted RBP10.87□□□□□ -0.67
SRPRB-202ENST00000466636 UBE2SQ16763 222 aa10.87□□□□□ -0.67
SRPRB-202ENST00000466636 NEK8Q86SG6 692 aa10.87□□□□□ -0.67
SRPRB-202ENST00000466636 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.87□□□□□ -0.674e-6■■■■■ 27.6
SRPRB-202ENST00000466636 LPAR1Q92633 364 aa10.87□□□□□ -0.67
SRPRB-202ENST00000466636 CUL5Q93034 780 aa10.87□□□□□ -0.67
SRPRB-202ENST00000466636 ZKSCAN4Q969J2 545 aaPredicted RBP10.87□□□□□ -0.67
SRPRB-202ENST00000466636 DCPSQ96C86 337 aaKnown RBP10.87□□□□□ -0.67
SRPRB-202ENST00000466636 TIGD1Q96MW7 591 aa10.87□□□□□ -0.67
SRPRB-202ENST00000466636 CSRNP2Q9H175 543 aa10.87□□□□□ -0.67
SRPRB-202ENST00000466636 GLT8D2Q9H1C3 349 aa10.87□□□□□ -0.67
SRPRB-202ENST00000466636 PSTPIP2Q9H939 334 aa10.87□□□□□ -0.67
SRPRB-202ENST00000466636 EMILIN3Q9NT22 766 aa10.87□□□□□ -0.67
SRPRB-202ENST00000466636 FZD1Q9UP38 647 aa10.87□□□□□ -0.67
SRPRB-202ENST00000466636 SBF1O95248 1867 aa10.87□□□□□ -0.67
SRPRB-202ENST00000466636 GLTPD2A6NH11 291 aa10.86□□□□□ -0.67
SRPRB-202ENST00000466636 OPLAHO14841 1288 aa10.86□□□□□ -0.67
SRPRB-202ENST00000466636 USP2O75604 605 aaPredicted RBP10.86□□□□□ -0.67
SRPRB-202ENST00000466636 TAL1P17542 331 aaPredicted RBP10.86□□□□□ -0.67
SRPRB-202ENST00000466636 EPHX2P34913 555 aa10.86□□□□□ -0.67
SRPRB-202ENST00000466636 SYKP43405 635 aa10.86□□□□□ -0.67
SRPRB-202ENST00000466636 IL17AQ16552 155 aa10.86□□□□□ -0.67
SRPRB-202ENST00000466636 SPECC1Q5M775 1068 aa10.86□□□□□ -0.67
SRPRB-202ENST00000466636 ARL6IP4Q66PJ3 421 aaKnown RBP10.86□□□□□ -0.67
SRPRB-202ENST00000466636 DLK2Q6UY11 383 aa10.86□□□□□ -0.67
SRPRB-202ENST00000466636 SULF1Q8IWU6 871 aa10.86□□□□□ -0.67
SRPRB-202ENST00000466636 CKAP2LQ8IYA6 745 aa10.86□□□□□ -0.67
SRPRB-202ENST00000466636 TBCKQ8TEA7 893 aa10.86□□□□□ -0.67
SRPRB-202ENST00000466636 ZC3H15Q8WU90 426 aaKnown RBP10.86□□□□□ -0.67
SRPRB-202ENST00000466636 C12orf42Q96LP6 360 aa10.86□□□□□ -0.67
SRPRB-202ENST00000466636 TMEM60Q9H2L4 133 aa10.86□□□□□ -0.67
SRPRB-202ENST00000466636 AS3MTQ9HBK9 375 aa10.86□□□□□ -0.67
SRPRB-202ENST00000466636 PICK1Q9NRD5 415 aa10.86□□□□□ -0.67
SRPRB-202ENST00000466636 FBXO28Q9NVF7 368 aa10.86□□□□□ -0.67
SRPRB-202ENST00000466636 FAM13BQ9NYF5 915 aa10.86□□□□□ -0.67
SRPRB-202ENST00000466636 KCNH3Q9ULD8 1083 aa10.86□□□□□ -0.67
SRPRB-202ENST00000466636 POTECB2RU33 542 aa10.85□□□□□ -0.67
SRPRB-202ENST00000466636 LAD1O00515 517 aa10.85□□□□□ -0.67
SRPRB-202ENST00000466636 MEIS2O14770 477 aa10.85□□□□□ -0.67
SRPRB-202ENST00000466636 CCDC192P0DO97 292 aa10.85□□□□□ -0.67
SRPRB-202ENST00000466636 VCAM1P19320 739 aa10.85□□□□□ -0.67
SRPRB-202ENST00000466636 PRPHP41219 470 aa10.85□□□□□ -0.67
SRPRB-202ENST00000466636 USP14P54578 494 aa10.85□□□□□ -0.67
SRPRB-202ENST00000466636 TYRO3Q06418 890 aa10.85□□□□□ -0.67
SRPRB-202ENST00000466636 TRAF1Q13077 416 aa10.85□□□□□ -0.67
SRPRB-202ENST00000466636 SPP2Q13103 211 aa10.85□□□□□ -0.67
SRPRB-202ENST00000466636 DGKZQ13574 1117 aa10.85□□□□□ -0.67
SRPRB-202ENST00000466636 MTMR2Q13614 643 aa10.85□□□□□ -0.67
SRPRB-202ENST00000466636 USP49Q70CQ1 688 aa10.85□□□□□ -0.67
SRPRB-202ENST00000466636 TEX2Q8IWB9 1127 aa10.85□□□□□ -0.67
SRPRB-202ENST00000466636 ZNF280CQ8ND82 737 aa10.85□□□□□ -0.67
SRPRB-202ENST00000466636 KIFC2Q96AC6 838 aa10.85□□□□□ -0.67
SRPRB-202ENST00000466636 P2RX7Q99572 595 aaKnown RBP10.85□□□□□ -0.67
SRPRB-202ENST00000466636 TAF1DQ9H5J8 278 aaPredicted RBP10.85□□□□□ -0.67
SRPRB-202ENST00000466636 PCDHB8Q9UN66 801 aa10.85□□□□□ -0.67
SRPRB-202ENST00000466636 PCDHB13Q9Y5F0 798 aa10.85□□□□□ -0.67
SRPRB-202ENST00000466636 SNCAIPQ9Y6H5 919 aa10.85□□□□□ -0.67
SRPRB-202ENST00000466636 TCHHQ07283 1943 aa10.84□□□□□ -0.67
SRPRB-202ENST00000466636 VWA3AA6NCI4 1184 aa10.84□□□□□ -0.67
SRPRB-202ENST00000466636 USP17L15C9J2P7 530 aa10.84□□□□□ -0.67
SRPRB-202ENST00000466636 USP17L13C9JLJ4 530 aa10.84□□□□□ -0.67
SRPRB-202ENST00000466636 USP17L11C9JVI0 530 aa10.84□□□□□ -0.67
SRPRB-202ENST00000466636 USP17L18D6R9N7 530 aa10.84□□□□□ -0.67
SRPRB-202ENST00000466636 USP17L22D6RA61 530 aa10.84□□□□□ -0.67
SRPRB-202ENST00000466636 USP17L17D6RBQ6 530 aa10.84□□□□□ -0.67
SRPRB-202ENST00000466636 USP17L19D6RCP7 530 aa10.84□□□□□ -0.67
SRPRB-202ENST00000466636 USP17L20D6RJB6 530 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms