RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 SPZ1Q9BXG8 430 aa21.71■■□□□ 1.07
LIMS2-212ENST00000466410 RAB21Q9UL25 225 aa21.71■■□□□ 1.07
LIMS2-212ENST00000466410 TFR2Q9UP52 801 aa21.71■■□□□ 1.07
LIMS2-212ENST00000466410 CDK8P49336 464 aa21.71■■□□□ 1.07
LIMS2-212ENST00000466410 AMPD2Q01433 879 aa21.71■■□□□ 1.07
LIMS2-212ENST00000466410 EYA3Q99504 573 aa21.71■■□□□ 1.07
LIMS2-212ENST00000466410 TRIM9Q9C026 710 aa21.71■■□□□ 1.07
LIMS2-212ENST00000466410 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.71■■□□□ 1.07
LIMS2-212ENST00000466410 CCNL1Q9UK58 526 aaPredicted RBP21.71■■□□□ 1.07
LIMS2-212ENST00000466410 SNED1Q8TER0 1413 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 SMCO2A6NFE2 343 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 LDHCP07864 332 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 RHOXF2BP0C7M4 288 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 BTDP43251 543 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 WHAMMP3Q1A5X7 153 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 ZNF804AQ7Z570 1209 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 RHOXF2Q9BQY4 288 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 TUBGCP2Q9BSJ2 902 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 CTAGE15A4D2H0 777 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 MAP2K7O14733 419 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 CTAGE8P0CG41 777 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 DNM2P50570 870 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 PDE4DQ08499 809 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 STK4Q13043 487 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 NONOQ15233 471 aaKnown RBP eCLIP21.7■■□□□ 1.06
LIMS2-212ENST00000466410 BEND6Q5SZJ8 279 aaPredicted RBP21.7■■□□□ 1.06
LIMS2-212ENST00000466410 KRT25Q7Z3Z0 450 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 CTAGE6Q86UF2 777 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 CTAGE4Q8IX94 777 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 DHTKD1Q96HY7 919 aaPredicted RBP21.7■■□□□ 1.06
LIMS2-212ENST00000466410 AK8Q96MA6 479 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 VAT1LQ9HCJ6 419 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 MYO6Q9UM54 1294 aa21.7■■□□□ 1.06
LIMS2-212ENST00000466410 SRGNP10124 158 aa21.69■■□□□ 1.06
LIMS2-212ENST00000466410 HERVK_113P62684 666 aa21.69■■□□□ 1.06
LIMS2-212ENST00000466410 ANKRD40Q6AI12 368 aa21.69■■□□□ 1.06
LIMS2-212ENST00000466410 NCAPH2Q6IBW4 605 aa21.69■■□□□ 1.06
LIMS2-212ENST00000466410 HNRNPLLQ8WVV9 542 aaKnown RBP21.69■■□□□ 1.06
LIMS2-212ENST00000466410 CUEDC2Q9H467 287 aa21.69■■□□□ 1.06
LIMS2-212ENST00000466410 AGPAT5Q9NUQ2 364 aa21.69■■□□□ 1.06
LIMS2-212ENST00000466410 POTEB2H3BUK9 544 aa21.69■■□□□ 1.06
LIMS2-212ENST00000466410 KLK7P49862 253 aa21.69■■□□□ 1.06
LIMS2-212ENST00000466410 P2RX5Q93086 422 aa21.69■■□□□ 1.06
LIMS2-212ENST00000466410 THSD7AQ9UPZ6 1657 aa21.68■■□□□ 1.06
LIMS2-212ENST00000466410 RASSF10A6NK89 507 aa21.68■■□□□ 1.06
LIMS2-212ENST00000466410 FCER1AP12319 257 aa21.68■■□□□ 1.06
LIMS2-212ENST00000466410 TECP42680 631 aa21.68■■□□□ 1.06
LIMS2-212ENST00000466410 ASIC1P78348 528 aa21.68■■□□□ 1.06
LIMS2-212ENST00000466410 ST5P78524 1137 aa21.68■■□□□ 1.06
LIMS2-212ENST00000466410 SEMA3FQ13275 785 aa21.68■■□□□ 1.06
LIMS2-212ENST00000466410 TSR1Q2NL82 804 aaKnown RBP21.68■■□□□ 1.06
LIMS2-212ENST00000466410 C16orf86Q6ZW13 317 aa21.68■■□□□ 1.06
LIMS2-212ENST00000466410 NOA1Q8NC60 698 aaKnown RBP21.68■■□□□ 1.06
LIMS2-212ENST00000466410 EXOC1Q9NV70 894 aa21.68■■□□□ 1.06
LIMS2-212ENST00000466410 CCNE1P24864 410 aa21.68■■□□□ 1.06
LIMS2-212ENST00000466410 NEK8Q86SG6 692 aa21.68■■□□□ 1.06
LIMS2-212ENST00000466410 NEDD1Q8NHV4 660 aa21.68■■□□□ 1.06
LIMS2-212ENST00000466410 NOC3LQ8WTT2 800 aaKnown RBP21.68■■□□□ 1.06
LIMS2-212ENST00000466410 TTYH3Q9C0H2 523 aa21.68■■□□□ 1.06
LIMS2-212ENST00000466410 HAUS4Q9H6D7 363 aa21.68■■□□□ 1.06
LIMS2-212ENST00000466410 MAGEF1Q9HAY2 307 aa21.68■■□□□ 1.06
LIMS2-212ENST00000466410 ZNF287Q9HBT7 754 aa21.68■■□□□ 1.06
LIMS2-212ENST00000466410 C6orf50Q9HD87 102 aa21.68■■□□□ 1.06
LIMS2-212ENST00000466410 CDK5RAP2Q96SN8 1893 aa21.68■■□□□ 1.06
LIMS2-212ENST00000466410 H3BQF6 201 aa21.67■■□□□ 1.06
LIMS2-212ENST00000466410 ENC1O14682 589 aa21.67■■□□□ 1.06
LIMS2-212ENST00000466410 TEX11Q8IYF3 940 aa21.67■■□□□ 1.06
LIMS2-212ENST00000466410 RRP36Q96EU6 259 aaKnown RBP21.67■■□□□ 1.06
LIMS2-212ENST00000466410 PIGSQ96S52 555 aa21.67■■□□□ 1.06
LIMS2-212ENST00000466410 MMTAG2Q9BU76 263 aaKnown RBP21.67■■□□□ 1.06
LIMS2-212ENST00000466410 SUGCTQ9HAC7 445 aa21.67■■□□□ 1.06
LIMS2-212ENST00000466410 ABCB6Q9NP58 842 aa21.67■■□□□ 1.06
LIMS2-212ENST00000466410 NKRFO15226 690 aaKnown RBP eCLIP21.67■■□□□ 1.06
LIMS2-212ENST00000466410 VSNL1P62760 191 aa21.67■■□□□ 1.06
LIMS2-212ENST00000466410 TUBB4BP68371 445 aa21.67■■□□□ 1.06
LIMS2-212ENST00000466410 TBC1D8BQ0IIM8 1120 aa21.67■■□□□ 1.06
LIMS2-212ENST00000466410 TBCKQ8TEA7 893 aa21.67■■□□□ 1.06
LIMS2-212ENST00000466410 HPS3Q969F9 1004 aa21.67■■□□□ 1.06
LIMS2-212ENST00000466410 CEP95Q96GE4 821 aa21.67■■□□□ 1.06
LIMS2-212ENST00000466410 CNOT6LQ96LI5 555 aaKnown RBP21.67■■□□□ 1.06
LIMS2-212ENST00000466410 C7orf25Q9BPX7 421 aa21.67■■□□□ 1.06
LIMS2-212ENST00000466410 HDAC6Q9UBN7 1215 aa21.67■■□□□ 1.06
LIMS2-212ENST00000466410 BIN2Q9UBW5 565 aaPredicted RBP21.67■■□□□ 1.06
LIMS2-212ENST00000466410 EP400Q96L91 3159 aa21.66■■□□□ 1.06
LIMS2-212ENST00000466410 CCDC66A2RUB6 948 aa21.66■■□□□ 1.06
LIMS2-212ENST00000466410 TRIM21P19474 475 aaKnown RBP21.66■■□□□ 1.06
LIMS2-212ENST00000466410 GNA11P29992 359 aa21.66■■□□□ 1.06
LIMS2-212ENST00000466410 RFC4P35249 363 aa21.66■■□□□ 1.06
LIMS2-212ENST00000466410 GPSM2P81274 684 aa21.66■■□□□ 1.06
LIMS2-212ENST00000466410 MCM6Q14566 821 aa21.66■■□□□ 1.06
LIMS2-212ENST00000466410 MEA1Q16626 185 aa21.66■■□□□ 1.06
LIMS2-212ENST00000466410 UBA5Q9GZZ9 404 aa21.66■■□□□ 1.06
LIMS2-212ENST00000466410 CD209Q9NNX6 404 aa21.66■■□□□ 1.06
LIMS2-212ENST00000466410 DDX60LQ5H9U9 1706 aaKnown RBP21.66■■□□□ 1.06
LIMS2-212ENST00000466410 CCDC122Q5T0U0 273 aa21.66■■□□□ 1.06
LIMS2-212ENST00000466410 CCDC47Q96A33 483 aaKnown RBP21.66■■□□□ 1.06
LIMS2-212ENST00000466410 ZBTB9Q96C00 473 aa21.66■■□□□ 1.06
LIMS2-212ENST00000466410 GPR75-ASB3A0A0A6YYF3 556 aa21.65■■□□□ 1.06
LIMS2-212ENST00000466410 BICDL2A1A5D9 508 aa21.65■■□□□ 1.06
LIMS2-212ENST00000466410 PSMD14O00487 310 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms