RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 PLXNA1Q9UIW2 1896 aa11.18□□□□□ -0.62
ATG3-203ENST00000465980 A0A1W2PRG0 241 aa11.17□□□□□ -0.62
ATG3-203ENST00000465980 CNMDO75829 334 aa11.17□□□□□ -0.62
ATG3-203ENST00000465980 REC8O95072 547 aa11.17□□□□□ -0.62
ATG3-203ENST00000465980 SGPL1O95470 568 aa11.17□□□□□ -0.62
ATG3-203ENST00000465980 MAPK4P31152 587 aa11.17□□□□□ -0.62
ATG3-203ENST00000465980 ATP2B2Q01814 1243 aa11.17□□□□□ -0.62
ATG3-203ENST00000465980 KCNH2Q12809 1159 aa11.17□□□□□ -0.62
ATG3-203ENST00000465980 UBE3CQ15386 1083 aa11.17□□□□□ -0.62
ATG3-203ENST00000465980 AMHR2Q16671 573 aa11.17□□□□□ -0.62
ATG3-203ENST00000465980 ZSCAN25Q6NSZ9 544 aa11.17□□□□□ -0.62
ATG3-203ENST00000465980 CATSPERGQ6ZRH7 1159 aa11.17□□□□□ -0.62
ATG3-203ENST00000465980 TMEM179Q6ZVK1 233 aa11.17□□□□□ -0.62
ATG3-203ENST00000465980 GPR142Q7Z601 462 aa11.17□□□□□ -0.62
ATG3-203ENST00000465980 NPAS3Q8IXF0 933 aa11.17□□□□□ -0.62
ATG3-203ENST00000465980 GTF3C2Q8WUA4 911 aaPredicted RBP11.17□□□□□ -0.62
ATG3-203ENST00000465980 RUFY2Q8WXA3 655 aa11.17□□□□□ -0.62
ATG3-203ENST00000465980 TANGO6Q9C0B7 1094 aa11.17□□□□□ -0.62
ATG3-203ENST00000465980 PAK6Q9NQU5 681 aaPredicted RBP11.17□□□□□ -0.62
ATG3-203ENST00000465980 DIAPH3Q9NSV4 1193 aa11.17□□□□□ -0.62
ATG3-203ENST00000465980 SMCHD1A6NHR9 2005 aa11.17□□□□□ -0.62
ATG3-203ENST00000465980 LAMA2P24043 3122 aaKnown RBP11.16□□□□□ -0.62
ATG3-203ENST00000465980 LAMA3Q16787 3333 aa11.16□□□□□ -0.62
ATG3-203ENST00000465980 RAD50Q92878 1312 aa11.16□□□□□ -0.62
ATG3-203ENST00000465980 SGSM2O43147 1006 aa11.16□□□□□ -0.62
ATG3-203ENST00000465980 ZKSCAN1P17029 563 aaPredicted RBP11.16□□□□□ -0.62
ATG3-203ENST00000465980 CDK8P49336 464 aa11.16□□□□□ -0.62
ATG3-203ENST00000465980 ICA1Q05084 483 aa11.16□□□□□ -0.62
ATG3-203ENST00000465980 CCL14Q16627 93 aa11.16□□□□□ -0.62
ATG3-203ENST00000465980 LRRFIP1Q32MZ4 808 aaKnown RBP11.16□□□□□ -0.62
ATG3-203ENST00000465980 HABP4Q5JVS0 413 aaKnown RBP11.16□□□□□ -0.62
ATG3-203ENST00000465980 KIAA1755Q5JYT7 1200 aa11.16□□□□□ -0.62
ATG3-203ENST00000465980 C12orf60Q5U649 245 aa11.16□□□□□ -0.62
ATG3-203ENST00000465980 TRIM46Q7Z4K8 759 aa11.16□□□□□ -0.62
ATG3-203ENST00000465980 PLEKHH3Q7Z736 793 aa11.16□□□□□ -0.62
ATG3-203ENST00000465980 UBE2Q1Q7Z7E8 422 aa11.16□□□□□ -0.62
ATG3-203ENST00000465980 SPICE1Q8N0Z3 855 aa11.16□□□□□ -0.62
ATG3-203ENST00000465980 DIS3LQ8TF46 1054 aaKnown RBP11.16□□□□□ -0.62
ATG3-203ENST00000465980 SOCS4Q8WXH5 440 aa11.16□□□□□ -0.62
ATG3-203ENST00000465980 BTBD7Q9P203 1132 aa11.16□□□□□ -0.62
ATG3-203ENST00000465980 SWAP70Q9UH65 585 aa11.16□□□□□ -0.62
ATG3-203ENST00000465980 RABGAP1Q9Y3P9 1069 aa11.16□□□□□ -0.62
ATG3-203ENST00000465980 MCM3APO60318 1980 aa11.16□□□□□ -0.62
ATG3-203ENST00000465980 MOXD2PA6NHM9 499 aa11.15□□□□□ -0.62
ATG3-203ENST00000465980 RNF113AO15541 343 aaKnown RBP11.15□□□□□ -0.62
ATG3-203ENST00000465980 EPB41L2O43491 1005 aaKnown RBP11.15□□□□□ -0.62
ATG3-203ENST00000465980 RAD21O60216 631 aa11.15□□□□□ -0.62
ATG3-203ENST00000465980 ZFYP08048 801 aaPredicted RBP11.15□□□□□ -0.62
ATG3-203ENST00000465980 CCNA1P78396 465 aa11.15□□□□□ -0.62
ATG3-203ENST00000465980 NMIQ13287 307 aaPredicted RBP11.15□□□□□ -0.62
ATG3-203ENST00000465980 CTR9Q6PD62 1173 aa11.15□□□□□ -0.62
ATG3-203ENST00000465980 CWC27Q6UX04 472 aaKnown RBP11.15□□□□□ -0.62
ATG3-203ENST00000465980 C16orf86Q6ZW13 317 aa11.15□□□□□ -0.62
ATG3-203ENST00000465980 PRR7Q8TB68 274 aa11.15□□□□□ -0.62
ATG3-203ENST00000465980 OSBP2Q969R2 916 aa11.15□□□□□ -0.62
ATG3-203ENST00000465980 STRBPQ96SI9 672 aaKnown RBP11.15□□□□□ -0.62
ATG3-203ENST00000465980 HTATIP2Q9BUP3 242 aa11.15□□□□□ -0.62
ATG3-203ENST00000465980 ARHGEF10LQ9HCE6 1279 aa11.15□□□□□ -0.62
ATG3-203ENST00000465980 HMX1Q9NP08 348 aaPredicted RBP11.15□□□□□ -0.62
ATG3-203ENST00000465980 NXF1Q9UBU9 619 aaKnown RBP11.15□□□□□ -0.62
ATG3-203ENST00000465980 ZNF236Q9UL36 1845 aa11.14□□□□□ -0.63
ATG3-203ENST00000465980 RPTORQ8N122 1335 aa11.14□□□□□ -0.63
ATG3-203ENST00000465980 NDUFV2P19404 249 aa11.14□□□□□ -0.63
ATG3-203ENST00000465980 VARSP26640 1264 aaKnown RBP11.14□□□□□ -0.63
ATG3-203ENST00000465980 RGS2P41220 211 aa11.14□□□□□ -0.63
ATG3-203ENST00000465980 ZMYM1Q5SVZ6 1142 aa11.14□□□□□ -0.63
ATG3-203ENST00000465980 APPBP2Q92624 585 aa11.14□□□□□ -0.63
ATG3-203ENST00000465980 PAWRQ96IZ0 340 aaKnown RBP11.14□□□□□ -0.63
ATG3-203ENST00000465980 FAM227BQ96M60 508 aa11.14□□□□□ -0.63
ATG3-203ENST00000465980 TBC1D32Q96NH3 1257 aa11.14□□□□□ -0.63
ATG3-203ENST00000465980 APBA2Q99767 749 aa11.14□□□□□ -0.63
ATG3-203ENST00000465980 USP26Q9BXU7 913 aa11.14□□□□□ -0.63
ATG3-203ENST00000465980 C22orf23Q9BZE7 217 aa11.14□□□□□ -0.63
ATG3-203ENST00000465980 IL25Q9H293 177 aa11.14□□□□□ -0.63
ATG3-203ENST00000465980 HELLSQ9NRZ9 838 aa11.14□□□□□ -0.63
ATG3-203ENST00000465980 IVNS1ABPQ9Y6Y0 642 aa11.14□□□□□ -0.63
ATG3-203ENST00000465980 A0A0D9SFI3 127 aa11.13□□□□□ -0.63
ATG3-203ENST00000465980 GSG1L2A8MUP6 293 aa11.13□□□□□ -0.63
ATG3-203ENST00000465980 MINDY4BA8MYZ0 360 aa11.13□□□□□ -0.63
ATG3-203ENST00000465980 M0R2C6 588 aa11.13□□□□□ -0.63
ATG3-203ENST00000465980 GPAA1O43292 621 aa11.13□□□□□ -0.63
ATG3-203ENST00000465980 FLOT1O75955 427 aa11.13□□□□□ -0.63
ATG3-203ENST00000465980 APPP05067 770 aa11.13□□□□□ -0.63
ATG3-203ENST00000465980 XRCC5P13010 732 aaKnown RBP11.13□□□□□ -0.63
ATG3-203ENST00000465980 TDO2P48775 406 aa11.13□□□□□ -0.63
ATG3-203ENST00000465980 RBM25P49756 843 aaKnown RBP11.13□□□□□ -0.63
ATG3-203ENST00000465980 CACNB2Q08289 660 aaPredicted RBP11.13□□□□□ -0.63
ATG3-203ENST00000465980 PLS1Q14651 629 aa11.13□□□□□ -0.63
ATG3-203ENST00000465980 SIAH1Q8IUQ4 282 aa11.13□□□□□ -0.63
ATG3-203ENST00000465980 USP6NLQ92738 828 aa11.13□□□□□ -0.63
ATG3-203ENST00000465980 ATG4CQ96DT6 458 aa11.13□□□□□ -0.63
ATG3-203ENST00000465980 CCDC17Q96LX7 622 aa11.13□□□□□ -0.63
ATG3-203ENST00000465980 SH2D4AQ9H788 454 aa11.13□□□□□ -0.63
ATG3-203ENST00000465980 VCPKMTQ9H867 229 aa11.13□□□□□ -0.63
ATG3-203ENST00000465980 EPB41L4AQ9HCS5 686 aaPredicted RBP11.13□□□□□ -0.63
ATG3-203ENST00000465980 ARPP21Q9UBL0 812 aaPredicted RBP11.13□□□□□ -0.63
ATG3-203ENST00000465980 SLC15A5A6NIM6 579 aa11.12□□□□□ -0.63
ATG3-203ENST00000465980 ZMYND10O75800 440 aa11.12□□□□□ -0.63
ATG3-203ENST00000465980 BMP1P13497 986 aa11.12□□□□□ -0.63
ATG3-203ENST00000465980 EEF2P13639 858 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms