RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 TMTC3Q6ZXV5 915 aa21.99■■□□□ 1.11
SDF4-205ENST00000465727 PROSER2Q86WR7 435 aaPredicted RBP21.99■■□□□ 1.11
SDF4-205ENST00000465727 GIMAP8Q8ND71 665 aaPredicted RBP21.99■■□□□ 1.11
SDF4-205ENST00000465727 RRP36Q96EU6 259 aaKnown RBP21.99■■□□□ 1.11
SDF4-205ENST00000465727 DUOX1Q9NRD9 1551 aa21.99■■□□□ 1.11
SDF4-205ENST00000465727 BICDL2A1A5D9 508 aa21.99■■□□□ 1.11
SDF4-205ENST00000465727 PLEKHA8P1O95397 391 aa21.99■■□□□ 1.11
SDF4-205ENST00000465727 PCP11498 1178 aaKnown RBP21.99■■□□□ 1.11
SDF4-205ENST00000465727 PPP1R2P41236 205 aa21.99■■□□□ 1.11
SDF4-205ENST00000465727 PMS1P54277 932 aaKnown RBP21.99■■□□□ 1.11
SDF4-205ENST00000465727 DDR1Q08345 913 aa21.99■■□□□ 1.11
SDF4-205ENST00000465727 TBC1D8BQ0IIM8 1120 aa21.99■■□□□ 1.11
SDF4-205ENST00000465727 TTMPQ5BVD1 217 aa21.99■■□□□ 1.11
SDF4-205ENST00000465727 CABS1Q96KC9 395 aa21.99■■□□□ 1.11
SDF4-205ENST00000465727 EHD4Q9H223 541 aa21.99■■□□□ 1.11
SDF4-205ENST00000465727 DUSP10Q9Y6W6 482 aa21.99■■□□□ 1.11
SDF4-205ENST00000465727 IRS4O14654 1257 aaPredicted RBP21.98■■□□□ 1.11
SDF4-205ENST00000465727 MEFVO15553 781 aaPredicted RBP21.98■■□□□ 1.11
SDF4-205ENST00000465727 CCDC96Q2M329 555 aa21.98■■□□□ 1.11
SDF4-205ENST00000465727 FBXW10Q5XX13 1052 aa21.98■■□□□ 1.11
SDF4-205ENST00000465727 PIK3AP1Q6ZUJ8 805 aa21.98■■□□□ 1.11
SDF4-205ENST00000465727 ERGIC2Q96RQ1 377 aa21.98■■□□□ 1.11
SDF4-205ENST00000465727 ZNF330Q9Y3S2 320 aaPredicted RBP21.98■■□□□ 1.11
SDF4-205ENST00000465727 RREB1Q92766 1687 aa21.97■■□□□ 1.11
SDF4-205ENST00000465727 PDE8AO60658 829 aa21.97■■□□□ 1.11
SDF4-205ENST00000465727 MCM7P33993 719 aa21.97■■□□□ 1.11
SDF4-205ENST00000465727 PAFAH1B1P43034 410 aa21.97■■□□□ 1.11
SDF4-205ENST00000465727 TROAPQ12815 778 aa21.97■■□□□ 1.11
SDF4-205ENST00000465727 CCDC181Q5TID7 509 aa21.97■■□□□ 1.11
SDF4-205ENST00000465727 KDM7AQ6ZMT4 941 aa21.97■■□□□ 1.11
SDF4-205ENST00000465727 IQCA1Q86XH1 822 aa21.97■■□□□ 1.11
SDF4-205ENST00000465727 OTUD6BQ8N6M0 293 aa21.97■■□□□ 1.11
SDF4-205ENST00000465727 HDAC7Q8WUI4 952 aa21.97■■□□□ 1.11
SDF4-205ENST00000465727 OSBPL9Q96SU4 736 aa21.97■■□□□ 1.11
SDF4-205ENST00000465727 IFIH1Q9BYX4 1025 aaKnown RBP21.97■■□□□ 1.11
SDF4-205ENST00000465727 LRWD1Q9UFC0 647 aa21.97■■□□□ 1.11
SDF4-205ENST00000465727 CNTNAP5Q8WYK1 1306 aa21.97■■□□□ 1.11
SDF4-205ENST00000465727 RASSF10A6NK89 507 aa21.97■■□□□ 1.11
SDF4-205ENST00000465727 SRRM3A6NNA2 597 aaPredicted RBP21.97■■□□□ 1.11
SDF4-205ENST00000465727 LCA5LO95447 670 aa21.97■■□□□ 1.11
SDF4-205ENST00000465727 MAP2K2P36507 400 aa21.97■■□□□ 1.11
SDF4-205ENST00000465727 HAUS3Q68CZ6 603 aa21.97■■□□□ 1.11
SDF4-205ENST00000465727 ZSCAN29Q8IWY8 852 aaPredicted RBP21.97■■□□□ 1.11
SDF4-205ENST00000465727 SYNE4Q8N205 404 aa21.97■■□□□ 1.11
SDF4-205ENST00000465727 CSGALNACT2Q8N6G5 542 aa21.97■■□□□ 1.11
SDF4-205ENST00000465727 C1orf131Q8NDD1 294 aaKnown RBP21.97■■□□□ 1.11
SDF4-205ENST00000465727 hCG_1642624A0A1W2PR95 340 aa21.96■■□□□ 1.11
SDF4-205ENST00000465727 CYP27A1Q02318 531 aa21.96■■□□□ 1.11
SDF4-205ENST00000465727 CHRNA2Q15822 529 aa21.96■■□□□ 1.11
SDF4-205ENST00000465727 EZH2Q15910 746 aaKnown RBP21.96■■□□□ 1.11
SDF4-205ENST00000465727 RNF14Q9UBS8 474 aa21.96■■□□□ 1.11
SDF4-205ENST00000465727 GGA2Q9UJY4 613 aa21.96■■□□□ 1.11
SDF4-205ENST00000465727 PLAGL2Q9UPG8 496 aa21.96■■□□□ 1.11
SDF4-205ENST00000465727 KLRC4O43908 158 aa21.95■■□□□ 1.11
SDF4-205ENST00000465727 FNTAP49354 379 aa21.95■■□□□ 1.11
SDF4-205ENST00000465727 NLRP5P59047 1200 aa21.95■■□□□ 1.11
SDF4-205ENST00000465727 C8orf74Q6P047 294 aa21.95■■□□□ 1.11
SDF4-205ENST00000465727 TSEN2Q8NCE0 465 aaKnown RBP21.95■■□□□ 1.11
SDF4-205ENST00000465727 ARL8AQ96BM9 186 aa21.95■■□□□ 1.11
SDF4-205ENST00000465727 MAGEF1Q9HAY2 307 aa21.95■■□□□ 1.11
SDF4-205ENST00000465727 TSKSQ9UJT2 592 aa21.95■■□□□ 1.11
SDF4-205ENST00000465727 CAPN6Q9Y6Q1 641 aa21.95■■□□□ 1.11
SDF4-205ENST00000465727 CAPN7Q9Y6W3 813 aa21.95■■□□□ 1.11
SDF4-205ENST00000465727 SCG2P13521 617 aa21.95■■□□□ 1.1
SDF4-205ENST00000465727 CALML3P27482 149 aa21.95■■□□□ 1.1
SDF4-205ENST00000465727 FKBP15Q5T1M5 1219 aa21.95■■□□□ 1.1
SDF4-205ENST00000465727 C4orf32Q8N8J7 132 aa21.95■■□□□ 1.1
SDF4-205ENST00000465727 GPATCH11Q8N954 259 aa21.95■■□□□ 1.1
SDF4-205ENST00000465727 DUSP9Q99956 384 aaKnown RBP21.95■■□□□ 1.1
SDF4-205ENST00000465727 EPN3Q9H201 632 aa21.95■■□□□ 1.1
SDF4-205ENST00000465727 KBTBD4Q9NVX7 518 aa21.95■■□□□ 1.1
SDF4-205ENST00000465727 SAMM50Q9Y512 469 aa21.95■■□□□ 1.1
SDF4-205ENST00000465727 PCDHA13Q9Y5I0 950 aa21.95■■□□□ 1.1
SDF4-205ENST00000465727 H0YHG0 523 aa21.94■■□□□ 1.1
SDF4-205ENST00000465727 ZNF263O14978 683 aa21.94■■□□□ 1.1
SDF4-205ENST00000465727 CCNE1P24864 410 aa21.94■■□□□ 1.1
SDF4-205ENST00000465727 PDCLQ13371 301 aa21.94■■□□□ 1.1
SDF4-205ENST00000465727 NAALADL2Q58DX5 795 aa21.94■■□□□ 1.1
SDF4-205ENST00000465727 TEX2Q8IWB9 1127 aa21.94■■□□□ 1.1
SDF4-205ENST00000465727 CD302Q8IX05 232 aa21.94■■□□□ 1.1
SDF4-205ENST00000465727 IFT20Q8IY31 132 aa21.94■■□□□ 1.1
SDF4-205ENST00000465727 MREGQ8N565 214 aa21.94■■□□□ 1.1
SDF4-205ENST00000465727 CCDC47Q96A33 483 aaKnown RBP21.94■■□□□ 1.1
SDF4-205ENST00000465727 ZIM3Q96PE6 472 aa21.94■■□□□ 1.1
SDF4-205ENST00000465727 CUEDC2Q9H467 287 aa21.94■■□□□ 1.1
SDF4-205ENST00000465727 CXorf56Q9H5V9 222 aa21.94■■□□□ 1.1
SDF4-205ENST00000465727 MINDY4BA8MYZ0 360 aa21.94■■□□□ 1.1
SDF4-205ENST00000465727 ATP6V1AP38606 617 aa21.94■■□□□ 1.1
SDF4-205ENST00000465727 PLCB4Q15147 1175 aa21.94■■□□□ 1.1
SDF4-205ENST00000465727 P2RX5Q93086 422 aa21.94■■□□□ 1.1
SDF4-205ENST00000465727 CNOT6LQ96LI5 555 aaKnown RBP21.94■■□□□ 1.1
SDF4-205ENST00000465727 PCMTD1Q96MG8 357 aaPredicted RBP21.94■■□□□ 1.1
SDF4-205ENST00000465727 PFKFB3Q16875 520 aaPredicted RBP21.93■■□□□ 1.1
SDF4-205ENST00000465727 CCSER1Q9C0I3 900 aa21.93■■□□□ 1.1
SDF4-205ENST00000465727 MYH10P35580 1976 aa21.93■■□□□ 1.1
SDF4-205ENST00000465727 GPTP24298 496 aa21.92■■□□□ 1.1
SDF4-205ENST00000465727 MMP14P50281 582 aa21.92■■□□□ 1.1
SDF4-205ENST00000465727 IQCKQ8N0W5 287 aa21.92■■□□□ 1.1
SDF4-205ENST00000465727 MIGA1Q8NAN2 632 aa21.92■■□□□ 1.1
SDF4-205ENST00000465727 NOC4LQ9BVI4 516 aaKnown RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms