RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 PTPRFP10586 1907 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 RLFQ13129 1914 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 hCG_1642624A0A1W2PR95 340 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 ADM5C9JUS6 153 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 USP2O75604 605 aaPredicted RBP10.18□□□□□ -0.78
UBA3-208ENST00000465627 MMP1P03956 469 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 GOLGA8HP0CJ92 632 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 SCG2P13521 617 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 INPP5BP32019 993 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 GUCY1B3Q02153 619 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 DSG2Q14126 1118 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 GPATCH4Q5T3I0 446 aaKnown RBP10.18□□□□□ -0.78
UBA3-208ENST00000465627 FAM173BQ6P4H8 233 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 FERMT3Q86UX7 667 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 ALYREFQ86V81 257 aaKnown RBP10.18□□□□□ -0.78
UBA3-208ENST00000465627 FAM177A1Q8N128 213 aaPredicted RBP10.18□□□□□ -0.78
UBA3-208ENST00000465627 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.18□□□□□ -0.78
UBA3-208ENST00000465627 WASF1Q92558 559 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 TNFRSF25Q93038 417 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 ZNF333Q96JL9 665 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 GUCD1Q96NT3 240 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 GBP4Q96PP9 640 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 PHF20Q9BVI0 1012 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 ZNF341Q9BYN7 854 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 CPVLQ9H3G5 476 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 ZSCAN16Q9H4T2 348 aaPredicted RBP10.18□□□□□ -0.78
UBA3-208ENST00000465627 CABP5Q9NP86 173 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 LMBRD1Q9NUN5 540 aa10.18□□□□□ -0.78
UBA3-208ENST00000465627 M0R2N6 131 aa10.17□□□□□ -0.78
UBA3-208ENST00000465627 ADAMTS3O15072 1205 aa10.17□□□□□ -0.78
UBA3-208ENST00000465627 CAP1Q01518 475 aa10.17□□□□□ -0.78
UBA3-208ENST00000465627 DCAF15Q66K64 600 aa10.17□□□□□ -0.78
UBA3-208ENST00000465627 SLFN13Q68D06 897 aa10.17□□□□□ -0.78
UBA3-208ENST00000465627 TTBK2Q6IQ55 1244 aa10.17□□□□□ -0.78
UBA3-208ENST00000465627 HOOK2Q96ED9 719 aa10.17□□□□□ -0.78
UBA3-208ENST00000465627 WDR18Q9BV38 432 aa10.17□□□□□ -0.78
UBA3-208ENST00000465627 JMJD4Q9H9V9 463 aa10.17□□□□□ -0.78
UBA3-208ENST00000465627 FRMPD2Q68DX3 1309 aaPredicted RBP10.16□□□□□ -0.78
UBA3-208ENST00000465627 H3BQV1 296 aa10.16□□□□□ -0.78
UBA3-208ENST00000465627 STXBP3O00186 592 aa10.16□□□□□ -0.78
UBA3-208ENST00000465627 PLA2G6O60733 806 aa10.16□□□□□ -0.78
UBA3-208ENST00000465627 PPP1R11O60927 126 aaPredicted RBP10.16□□□□□ -0.78
UBA3-208ENST00000465627 FOSBP53539 338 aa10.16□□□□□ -0.78
UBA3-208ENST00000465627 DNM1Q05193 864 aaKnown RBP10.16□□□□□ -0.78
UBA3-208ENST00000465627 MAP3K11Q16584 847 aa10.16□□□□□ -0.78
UBA3-208ENST00000465627 SUPT20HL1Q3ZLR7 823 aa10.16□□□□□ -0.78
UBA3-208ENST00000465627 WWC2Q6AWC2 1192 aa10.16□□□□□ -0.78
UBA3-208ENST00000465627 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.16□□□□□ -0.78
UBA3-208ENST00000465627 CCDC84Q86UT8 332 aaPredicted RBP10.16□□□□□ -0.78
UBA3-208ENST00000465627 SCYL3Q8IZE3 742 aa10.16□□□□□ -0.78
UBA3-208ENST00000465627 DCPSQ96C86 337 aaKnown RBP10.16□□□□□ -0.78
UBA3-208ENST00000465627 UBA5Q9GZZ9 404 aa10.16□□□□□ -0.78
UBA3-208ENST00000465627 KIAA1683Q9H0B3 1180 aa10.16□□□□□ -0.78
UBA3-208ENST00000465627 VCPKMTQ9H867 229 aa10.16□□□□□ -0.78
UBA3-208ENST00000465627 ARHGEF10LQ9HCE6 1279 aa10.16□□□□□ -0.78
UBA3-208ENST00000465627 SH3GLB2Q9NR46 395 aa10.16□□□□□ -0.78
UBA3-208ENST00000465627 RYDENQ9NUL5 291 aaKnown RBP10.16□□□□□ -0.78
UBA3-208ENST00000465627 BARHL2Q9NY43 387 aa10.16□□□□□ -0.78
UBA3-208ENST00000465627 PLA2G2EQ9NZK7 142 aa10.16□□□□□ -0.78
UBA3-208ENST00000465627 VPS54Q9P1Q0 977 aa10.16□□□□□ -0.78
UBA3-208ENST00000465627 KCNJ14Q9UNX9 436 aa10.16□□□□□ -0.78
UBA3-208ENST00000465627 FZD1Q9UP38 647 aa10.16□□□□□ -0.78
UBA3-208ENST00000465627 PTPRAP18433 802 aa10.15□□□□□ -0.78
UBA3-208ENST00000465627 PSEN2P49810 448 aa10.15□□□□□ -0.78
UBA3-208ENST00000465627 ATP2B2Q01814 1243 aa10.15□□□□□ -0.78
UBA3-208ENST00000465627 KCTD1Q719H9 257 aa10.15□□□□□ -0.78
UBA3-208ENST00000465627 KRT26Q7Z3Y9 468 aa10.15□□□□□ -0.78
UBA3-208ENST00000465627 BRAPQ7Z569 592 aa10.15□□□□□ -0.78
UBA3-208ENST00000465627 SULF1Q8IWU6 871 aa10.15□□□□□ -0.78
UBA3-208ENST00000465627 ADGRF4Q8IZF3 695 aa10.15□□□□□ -0.78
UBA3-208ENST00000465627 DAGLBQ8NCG7 672 aa10.15□□□□□ -0.78
UBA3-208ENST00000465627 OXER1Q8TDS5 423 aa10.15□□□□□ -0.78
UBA3-208ENST00000465627 ZKSCAN4Q969J2 545 aaPredicted RBP10.15□□□□□ -0.78
UBA3-208ENST00000465627 CDCA5Q96FF9 252 aa10.15□□□□□ -0.78
UBA3-208ENST00000465627 PIGSQ96S52 555 aa10.15□□□□□ -0.78
UBA3-208ENST00000465627 WRNIP1Q96S55 665 aa10.15□□□□□ -0.78
UBA3-208ENST00000465627 NUP88Q99567 741 aaPredicted RBP10.15□□□□□ -0.78
UBA3-208ENST00000465627 FOXP1Q9H334 677 aaPredicted RBP10.15□□□□□ -0.78
UBA3-208ENST00000465627 GPCPD1Q9NPB8 672 aa10.15□□□□□ -0.78
UBA3-208ENST00000465627 CNPY2Q9Y2B0 182 aa10.15□□□□□ -0.78
UBA3-208ENST00000465627 ATP6V1DQ9Y5K8 247 aa10.15□□□□□ -0.78
UBA3-208ENST00000465627 SNCAIPQ9Y6H5 919 aa10.15□□□□□ -0.78
UBA3-208ENST00000465627 ALPK3Q96L96 1907 aa10.15□□□□□ -0.79
UBA3-208ENST00000465627 ELP1O95163 1332 aa10.15□□□□□ -0.79
UBA3-208ENST00000465627 ESYT2A0FGR8 921 aa10.14□□□□□ -0.79
UBA3-208ENST00000465627 DDX11L8A8MPP1 907 aa10.14□□□□□ -0.79
UBA3-208ENST00000465627 BTBD18B2RXH4 712 aa10.14□□□□□ -0.79
UBA3-208ENST00000465627 BMP3P12645 472 aa10.14□□□□□ -0.79
UBA3-208ENST00000465627 SLC16A2P36021 539 aa10.14□□□□□ -0.79
UBA3-208ENST00000465627 SLC1A4P43007 532 aa10.14□□□□□ -0.79
UBA3-208ENST00000465627 TOB1P50616 345 aaPredicted RBP10.14□□□□□ -0.79
UBA3-208ENST00000465627 MYSM1Q5VVJ2 828 aa10.14□□□□□ -0.79
UBA3-208ENST00000465627 DMRTA1Q5VZB9 504 aa10.14□□□□□ -0.79
UBA3-208ENST00000465627 ATL3Q6DD88 541 aa10.14□□□□□ -0.79
UBA3-208ENST00000465627 MCTP1Q6DN14 999 aa10.14□□□□□ -0.79
UBA3-208ENST00000465627 DIS3L2Q8IYB7 885 aaKnown RBP10.14□□□□□ -0.79
UBA3-208ENST00000465627 C12orf42Q96LP6 360 aa10.14□□□□□ -0.79
UBA3-208ENST00000465627 ZMYND12Q9H0C1 365 aa10.14□□□□□ -0.79
UBA3-208ENST00000465627 EMILIN3Q9NT22 766 aa10.14□□□□□ -0.79
UBA3-208ENST00000465627 MTMR7Q9Y216 660 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms