RNA–Protein interactions for RNA: ENST00000465614.1

LMO2-205, Transcript of LIM domain only 2, humanhuman

TSL 5

Gene LMO2, Length 869 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-205ENST00000465614 CCDC96Q2M329 555 aa28.34■■■□□ 2.13
LMO2-205ENST00000465614 ZNF589Q86UQ0 364 aaPredicted RBP28.34■■■□□ 2.13
LMO2-205ENST00000465614 RNPC3Q96LT9 517 aaKnown RBP28.34■■■□□ 2.13
LMO2-205ENST00000465614 RANBP17Q9H2T7 1088 aaKnown RBP28.34■■■□□ 2.13
LMO2-205ENST00000465614 SEMA6BQ9H3T3 888 aa28.34■■■□□ 2.13
LMO2-205ENST00000465614 CCPG1Q9ULG6 757 aa28.34■■■□□ 2.13
LMO2-205ENST00000465614 MTMR7Q9Y216 660 aa28.34■■■□□ 2.13
LMO2-205ENST00000465614 GNEQ9Y223 722 aaKnown RBP28.34■■■□□ 2.13
LMO2-205ENST00000465614 A0A0U1RQG5 324 aaPredicted RBP28.33■■■□□ 2.13
LMO2-205ENST00000465614 ARVCFO00192 962 aa28.33■■■□□ 2.13
LMO2-205ENST00000465614 TOP1P11387 765 aaKnown RBP28.33■■■□□ 2.13
LMO2-205ENST00000465614 NMIQ13287 307 aaPredicted RBP28.33■■■□□ 2.13
LMO2-205ENST00000465614 SMC5Q8IY18 1101 aa28.33■■■□□ 2.13
LMO2-205ENST00000465614 TMEM47Q9BQJ4 181 aa28.33■■■□□ 2.13
LMO2-205ENST00000465614 LNPKQ9C0E8 428 aa28.33■■■□□ 2.13
LMO2-205ENST00000465614 TOMM22Q9NS69 142 aa28.33■■■□□ 2.13
LMO2-205ENST00000465614 RRP12Q5JTH9 1297 aaKnown RBP28.32■■■□□ 2.12
LMO2-205ENST00000465614 TTBK2Q6IQ55 1244 aa28.32■■■□□ 2.12
LMO2-205ENST00000465614 VTI1AQ96AJ9 217 aa28.32■■■□□ 2.12
LMO2-205ENST00000465614 PCP11498 1178 aaKnown RBP28.31■■■□□ 2.12
LMO2-205ENST00000465614 SLC16A2P36021 539 aa28.31■■■□□ 2.12
LMO2-205ENST00000465614 MFSD5Q6N075 450 aa28.31■■■□□ 2.12
LMO2-205ENST00000465614 FAM126BQ8IXS8 530 aa28.31■■■□□ 2.12
LMO2-205ENST00000465614 CDX2Q99626 313 aaPredicted RBP28.31■■■□□ 2.12
LMO2-205ENST00000465614 TTYH1Q9H313 450 aaPredicted RBP28.31■■■□□ 2.12
LMO2-205ENST00000465614 CCDC171Q6TFL3 1326 aa28.31■■■□□ 2.12
LMO2-205ENST00000465614 BEX3Q00994 111 aa28.3■■■□□ 2.12
LMO2-205ENST00000465614 SYDE2Q5VT97 1194 aa28.3■■■□□ 2.12
LMO2-205ENST00000465614 TAPT1Q6NXT6 567 aa28.3■■■□□ 2.12
LMO2-205ENST00000465614 NSMFQ6X4W1 530 aa28.3■■■□□ 2.12
LMO2-205ENST00000465614 NOL8Q76FK4 1167 aaKnown RBP28.3■■■□□ 2.12
LMO2-205ENST00000465614 TLK2Q86UE8 772 aa28.3■■■□□ 2.12
LMO2-205ENST00000465614 MORC4Q8TE76 937 aa28.3■■■□□ 2.12
LMO2-205ENST00000465614 DDX49Q9Y6V7 483 aaKnown RBP28.3■■■□□ 2.12
LMO2-205ENST00000465614 UNC80Q8N2C7 3258 aa28.3■■■□□ 2.12
LMO2-205ENST00000465614 TRIM6-TRIM34B2RNG4 842 aa28.29■■■□□ 2.12
LMO2-205ENST00000465614 SMPD1P17405 629 aa28.29■■■□□ 2.12
LMO2-205ENST00000465614 IQSEC1Q6DN90 963 aa28.29■■■□□ 2.12
LMO2-205ENST00000465614 TTC14Q96N46 770 aa28.29■■■□□ 2.12
LMO2-205ENST00000465614 TMEM265A0A087WTH1 108 aa28.28■■■□□ 2.12
LMO2-205ENST00000465614 CABYRO75952 493 aa28.28■■■□□ 2.12
LMO2-205ENST00000465614 PDHBP11177 359 aa28.28■■■□□ 2.12
LMO2-205ENST00000465614 HAND2P61296 217 aa28.28■■■□□ 2.12
LMO2-205ENST00000465614 FSCN1Q16658 493 aaKnown RBP28.28■■■□□ 2.12
LMO2-205ENST00000465614 AKNAD1Q5T1N1 836 aa28.28■■■□□ 2.12
LMO2-205ENST00000465614 FBXO16Q8IX29 292 aaPredicted RBP28.28■■■□□ 2.12
LMO2-205ENST00000465614 SLC43A3Q8NBI5 491 aa28.28■■■□□ 2.12
LMO2-205ENST00000465614 PURBQ96QR8 312 aaKnown RBP28.28■■■□□ 2.12
LMO2-205ENST00000465614 VTA1Q9NP79 307 aa28.28■■■□□ 2.12
LMO2-205ENST00000465614 PDGFCQ9NRA1 345 aa28.28■■■□□ 2.12
LMO2-205ENST00000465614 Q9Y3F1 56 aa28.28■■■□□ 2.12
LMO2-205ENST00000465614 CDH23Q9H251 3354 aa28.27■■■□□ 2.12
LMO2-205ENST00000465614 FRMPD2Q68DX3 1309 aaPredicted RBP28.27■■■□□ 2.12
LMO2-205ENST00000465614 CD4P01730 458 aa28.27■■■□□ 2.12
LMO2-205ENST00000465614 BAATQ14032 418 aaPredicted RBP28.27■■■□□ 2.12
LMO2-205ENST00000465614 CXCL17Q6UXB2 119 aa28.27■■■□□ 2.12
LMO2-205ENST00000465614 MFSD6Q6ZSS7 791 aa28.27■■■□□ 2.12
LMO2-205ENST00000465614 RILPL2Q969X0 211 aa28.27■■■□□ 2.12
LMO2-205ENST00000465614 AP5M1Q9H0R1 490 aa28.27■■■□□ 2.12
LMO2-205ENST00000465614 RWDD1Q9H446 243 aaPredicted RBP28.27■■■□□ 2.12
LMO2-205ENST00000465614 OSBPL3Q9H4L5 887 aa28.27■■■□□ 2.12
LMO2-205ENST00000465614 GPCPD1Q9NPB8 672 aa28.27■■■□□ 2.12
LMO2-205ENST00000465614 LOC102724159A0A0B4J2E5 919 aa28.26■■■□□ 2.11
LMO2-205ENST00000465614 NFIBO00712 420 aa28.26■■■□□ 2.11
LMO2-205ENST00000465614 TLR3O15455 904 aaKnown RBP28.26■■■□□ 2.11
LMO2-205ENST00000465614 SNHG28P0DPA3 235 aa28.26■■■□□ 2.11
LMO2-205ENST00000465614 SDSP20132 328 aa28.26■■■□□ 2.11
LMO2-205ENST00000465614 PWP2Q15269 919 aaKnown RBP28.26■■■□□ 2.11
LMO2-205ENST00000465614 EEPD1Q7L9B9 569 aa28.26■■■□□ 2.11
LMO2-205ENST00000465614 TBC1D10CQ8IV04 446 aa28.26■■■□□ 2.11
LMO2-205ENST00000465614 PNMA2Q9UL42 364 aa28.26■■■□□ 2.11
LMO2-205ENST00000465614 DYNC1LI2O43237 492 aaPredicted RBP28.25■■■□□ 2.11
LMO2-205ENST00000465614 PTGS1P23219 599 aa28.25■■■□□ 2.11
LMO2-205ENST00000465614 MFAP1P55081 439 aaKnown RBP28.25■■■□□ 2.11
LMO2-205ENST00000465614 ZNF543Q08ER8 600 aa28.25■■■□□ 2.11
LMO2-205ENST00000465614 PPIGQ13427 754 aaKnown RBP eCLIP28.25■■■□□ 2.11
LMO2-205ENST00000465614 C16orf59Q7L2K0 433 aa28.25■■■□□ 2.11
LMO2-205ENST00000465614 CHD1LQ86WJ1 897 aa28.25■■■□□ 2.11
LMO2-205ENST00000465614 PLEKHM2Q8IWE5 1019 aa28.25■■■□□ 2.11
LMO2-205ENST00000465614 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.25■■■□□ 2.111e-11■■□□□ 14.4
LMO2-205ENST00000465614 RNF41Q9H4P4 317 aaPredicted RBP28.25■■■□□ 2.11
LMO2-205ENST00000465614 ADD3Q9UEY8 706 aaKnown RBP28.25■■■□□ 2.11
LMO2-205ENST00000465614 LRRC37A2A6NM11 1700 aa28.25■■■□□ 2.11
LMO2-205ENST00000465614 CUL9Q8IWT3 2517 aa28.24■■■□□ 2.11
LMO2-205ENST00000465614 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.24■■■□□ 2.11
LMO2-205ENST00000465614 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.24■■■□□ 2.11
LMO2-205ENST00000465614 TMEM63BQ5T3F8 832 aa28.24■■■□□ 2.11
LMO2-205ENST00000465614 B4GALNT3Q6L9W6 998 aa28.24■■■□□ 2.11
LMO2-205ENST00000465614 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.24■■■□□ 2.11
LMO2-205ENST00000465614 CLEC4DQ8WXI8 215 aa28.24■■■□□ 2.11
LMO2-205ENST00000465614 SEZ6LQ9BYH1 1024 aa28.24■■■□□ 2.11
LMO2-205ENST00000465614 EYSQ5T1H1 3165 aa28.23■■■□□ 2.11
LMO2-205ENST00000465614 GRIN2DO15399 1336 aa28.23■■■□□ 2.11
LMO2-205ENST00000465614 ZEB2O60315 1214 aa28.23■■■□□ 2.11
LMO2-205ENST00000465614 CSF2RAP15509 400 aa28.23■■■□□ 2.11
LMO2-205ENST00000465614 ALDH5A1P51649 535 aaPredicted RBP28.23■■■□□ 2.11
LMO2-205ENST00000465614 NUCB1Q02818 461 aa28.23■■■□□ 2.11
LMO2-205ENST00000465614 ITGA7Q13683 1181 aa28.23■■■□□ 2.11
LMO2-205ENST00000465614 TMEM240Q5SV17 173 aa28.23■■■□□ 2.11
LMO2-205ENST00000465614 KIAA1211Q6ZU35 1233 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms