RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 CMTR1Q8N1G2 835 aaKnown RBP14.39□□□□□ -0.11
CHPF2-202ENST00000465601 PIBF1Q8WXW3 757 aa14.39□□□□□ -0.11
CHPF2-202ENST00000465601 MTMR8Q96EF0 704 aa14.39□□□□□ -0.11
CHPF2-202ENST00000465601 PIGSQ96S52 555 aa14.39□□□□□ -0.11
CHPF2-202ENST00000465601 SLC5A4Q9NY91 659 aa14.39□□□□□ -0.11
CHPF2-202ENST00000465601 ZNF792Q3KQV3 632 aa14.38□□□□□ -0.11
CHPF2-202ENST00000465601 NSMFQ6X4W1 530 aa14.38□□□□□ -0.11
CHPF2-202ENST00000465601 FBXO11Q86XK2 927 aa14.38□□□□□ -0.11
CHPF2-202ENST00000465601 FBXL16Q8N461 479 aa14.38□□□□□ -0.11
CHPF2-202ENST00000465601 CCDC82Q8N4S0 544 aa14.38□□□□□ -0.11
CHPF2-202ENST00000465601 SRBD1Q8N5C6 995 aaKnown RBP14.38□□□□□ -0.11
CHPF2-202ENST00000465601 CLEC4DQ8WXI8 215 aa14.38□□□□□ -0.11
CHPF2-202ENST00000465601 AGXT2Q9BYV1 514 aa14.38□□□□□ -0.11
CHPF2-202ENST00000465601 UNC93B1Q9H1C4 597 aa14.38□□□□□ -0.11
CHPF2-202ENST00000465601 A1CFQ9NQ94 594 aaKnown RBP14.38□□□□□ -0.11
CHPF2-202ENST00000465601 PDRG1Q9NUG6 133 aa14.38□□□□□ -0.11
CHPF2-202ENST00000465601 PNMA2Q9UL42 364 aa14.38□□□□□ -0.11
CHPF2-202ENST00000465601 DNAJC25-GNG10A0A024R161 153 aa14.37□□□□□ -0.11
CHPF2-202ENST00000465601 GOLGA8AA7E2F4 631 aa14.37□□□□□ -0.11
CHPF2-202ENST00000465601 GOLGA8BA8MQT2 603 aa14.37□□□□□ -0.11
CHPF2-202ENST00000465601 NFIBO00712 420 aa14.37□□□□□ -0.11
CHPF2-202ENST00000465601 ZBTB5O15062 677 aa14.37□□□□□ -0.11
CHPF2-202ENST00000465601 PPP1R11O60927 126 aaPredicted RBP14.37□□□□□ -0.11
CHPF2-202ENST00000465601 CCL5P13501 91 aa14.37□□□□□ -0.11
CHPF2-202ENST00000465601 CYP2C19P33261 490 aa14.37□□□□□ -0.11
CHPF2-202ENST00000465601 SOX10P56693 466 aa14.37□□□□□ -0.11
CHPF2-202ENST00000465601 CNTN2Q02246 1040 aa14.37□□□□□ -0.11
CHPF2-202ENST00000465601 CACNB2Q08289 660 aaPredicted RBP14.37□□□□□ -0.11
CHPF2-202ENST00000465601 TOB2Q14106 344 aaPredicted RBP14.37□□□□□ -0.11
CHPF2-202ENST00000465601 RTN1Q16799 776 aa14.37□□□□□ -0.11
CHPF2-202ENST00000465601 MFSD14CQ5VZR4 134 aa14.37□□□□□ -0.11
CHPF2-202ENST00000465601 MAML3Q96JK9 1138 aa14.37□□□□□ -0.11
CHPF2-202ENST00000465601 LZTS2Q9BRK4 669 aa14.37□□□□□ -0.11
CHPF2-202ENST00000465601 LARP6Q9BRS8 491 aaKnown RBP14.37□□□□□ -0.11
CHPF2-202ENST00000465601 TMEM106CQ9BVX2 250 aa14.37□□□□□ -0.11
CHPF2-202ENST00000465601 RNF208Q9H0X6 261 aa14.37□□□□□ -0.11
CHPF2-202ENST00000465601 DIS3Q9Y2L1 958 aaKnown RBP14.37□□□□□ -0.11
CHPF2-202ENST00000465601 BRCA2P51587 3418 aa14.37□□□□□ -0.11
CHPF2-202ENST00000465601 PNMA6FA0A0J9YX94 578 aa14.36□□□□□ -0.11
CHPF2-202ENST00000465601 POTEB2H3BUK9 544 aa14.36□□□□□ -0.11
CHPF2-202ENST00000465601 PRKAR2AP13861 404 aaKnown RBP14.36□□□□□ -0.11
CHPF2-202ENST00000465601 SMARCA1P28370 1054 aa14.36□□□□□ -0.11
CHPF2-202ENST00000465601 BAATQ14032 418 aaPredicted RBP14.36□□□□□ -0.11
CHPF2-202ENST00000465601 OLFML2BQ68BL8 750 aa14.36□□□□□ -0.11
CHPF2-202ENST00000465601 TMTC3Q6ZXV5 915 aa14.36□□□□□ -0.11
CHPF2-202ENST00000465601 TBC1D5Q92609 795 aa14.36□□□□□ -0.11
CHPF2-202ENST00000465601 SPZ1Q9BXG8 430 aa14.36□□□□□ -0.11
CHPF2-202ENST00000465601 AMNQ9BXJ7 453 aa14.36□□□□□ -0.11
CHPF2-202ENST00000465601 FAM217BQ9NTX9 383 aaPredicted RBP14.36□□□□□ -0.11
CHPF2-202ENST00000465601 CYP39A1Q9NYL5 469 aa14.36□□□□□ -0.11
CHPF2-202ENST00000465601 PFASO15067 1338 aa14.36□□□□□ -0.11
CHPF2-202ENST00000465601 ABCB11O95342 1321 aa14.36□□□□□ -0.11
CHPF2-202ENST00000465601 LCTP09848 1927 aa14.35□□□□□ -0.11
CHPF2-202ENST00000465601 hCG_1642624A0A1W2PR95 340 aa14.35□□□□□ -0.11
CHPF2-202ENST00000465601 PTPDC1A2A3K4 754 aa14.35□□□□□ -0.11
CHPF2-202ENST00000465601 POTEFA5A3E0 1075 aa14.35□□□□□ -0.11
CHPF2-202ENST00000465601 IGHA2P01877 340 aa14.35□□□□□ -0.11
CHPF2-202ENST00000465601 CDC27P30260 824 aa14.35□□□□□ -0.11
CHPF2-202ENST00000465601 ADD1P35611 737 aaKnown RBP14.35□□□□□ -0.11
CHPF2-202ENST00000465601 METAP2P50579 478 aaKnown RBP eCLIP14.35□□□□□ -0.11
CHPF2-202ENST00000465601 PRAMEF19Q5SWL8 479 aa14.35□□□□□ -0.11
CHPF2-202ENST00000465601 MAP3K21Q5TCX8 1036 aa14.35□□□□□ -0.11
CHPF2-202ENST00000465601 FAM133AQ8N9E0 248 aa14.35□□□□□ -0.11
CHPF2-202ENST00000465601 RRP36Q96EU6 259 aaKnown RBP14.35□□□□□ -0.11
CHPF2-202ENST00000465601 IL17RAQ96F46 866 aa14.35□□□□□ -0.11
CHPF2-202ENST00000465601 FGD4Q96M96 766 aa14.35□□□□□ -0.11
CHPF2-202ENST00000465601 PURBQ96QR8 312 aaKnown RBP14.35□□□□□ -0.11
CHPF2-202ENST00000465601 RBM28Q9NW13 759 aaKnown RBP14.35□□□□□ -0.11
CHPF2-202ENST00000465601 MRPL11Q9Y3B7 192 aaKnown RBP14.35□□□□□ -0.11
CHPF2-202ENST00000465601 PCDHA1Q9Y5I3 950 aa14.35□□□□□ -0.11
CHPF2-202ENST00000465601 RPTORQ8N122 1335 aa14.35□□□□□ -0.11
CHPF2-202ENST00000465601 SOWAHBA6NEL2 793 aa14.34□□□□□ -0.11
CHPF2-202ENST00000465601 CALML3P27482 149 aa14.34□□□□□ -0.11
CHPF2-202ENST00000465601 PDIA3P30101 505 aaKnown RBP14.34□□□□□ -0.11
CHPF2-202ENST00000465601 CCND3P30281 292 aaPredicted RBP14.34□□□□□ -0.11
CHPF2-202ENST00000465601 RCAN1P53805 252 aa14.34□□□□□ -0.11
CHPF2-202ENST00000465601 EVCP57679 992 aa14.34□□□□□ -0.11
CHPF2-202ENST00000465601 CCT2P78371 535 aaKnown RBP14.34□□□□□ -0.11
CHPF2-202ENST00000465601 RNF207Q6ZRF8 634 aa14.34□□□□□ -0.11
CHPF2-202ENST00000465601 TINF2Q9BSI4 451 aa14.34□□□□□ -0.11
CHPF2-202ENST00000465601 C22orf23Q9BZE7 217 aa14.34□□□□□ -0.11
CHPF2-202ENST00000465601 HMX1Q9NP08 348 aaPredicted RBP14.34□□□□□ -0.11
CHPF2-202ENST00000465601 EN2P19622 333 aaPredicted RBP14.33□□□□□ -0.12
CHPF2-202ENST00000465601 NEK4P51957 841 aa14.33□□□□□ -0.12
CHPF2-202ENST00000465601 RPS6P62753 249 aaKnown RBP14.33□□□□□ -0.12
CHPF2-202ENST00000465601 IFFO2Q5TF58 517 aa14.33□□□□□ -0.12
CHPF2-202ENST00000465601 SLC30A10Q6XR72 485 aa14.33□□□□□ -0.12
CHPF2-202ENST00000465601 RGS22Q8NE09 1264 aa14.33□□□□□ -0.12
CHPF2-202ENST00000465601 TRPV1Q8NER1 839 aa14.33□□□□□ -0.12
CHPF2-202ENST00000465601 DEFB118Q96PH6 123 aa14.33□□□□□ -0.12
CHPF2-202ENST00000465601 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.33□□□□□ -0.128e-6■□□□□ 9
CHPF2-202ENST00000465601 SEC63Q9UGP8 760 aaKnown RBP14.33□□□□□ -0.12
CHPF2-202ENST00000465601 DDX49Q9Y6V7 483 aaKnown RBP14.33□□□□□ -0.12
CHPF2-202ENST00000465601 CCDC196A0A1B0GTZ2 297 aa14.32□□□□□ -0.12
CHPF2-202ENST00000465601 OPLAHO14841 1288 aa14.32□□□□□ -0.12
CHPF2-202ENST00000465601 SNAI1O95863 264 aaPredicted RBP14.32□□□□□ -0.12
CHPF2-202ENST00000465601 GJB1P08034 283 aa14.32□□□□□ -0.12
CHPF2-202ENST00000465601 CNGA1P29973 690 aa14.32□□□□□ -0.12
CHPF2-202ENST00000465601 FUT2Q10981 343 aa14.32□□□□□ -0.12
CHPF2-202ENST00000465601 TRAF1Q13077 416 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms