RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 PLEKHN1Q494U1 663 aaPredicted RBP8.81□□□□□ -1
SMC4-205ENST00000465563 ZC3H14Q6PJT7 736 aaKnown RBP8.81□□□□□ -1
SMC4-205ENST00000465563 RGS22Q8NE09 1264 aa8.81□□□□□ -1
SMC4-205ENST00000465563 SPATA32Q96LK8 384 aa8.81□□□□□ -1
SMC4-205ENST00000465563 DIS3Q9Y2L1 958 aaKnown RBP8.81□□□□□ -1
SMC4-205ENST00000465563 TBC1D8O95759 1140 aa8.8□□□□□ -1
SMC4-205ENST00000465563 CD3EP07766 207 aa8.8□□□□□ -1
SMC4-205ENST00000465563 NCKAP1LP55160 1127 aa8.8□□□□□ -1
SMC4-205ENST00000465563 PAK2Q13177 524 aa8.8□□□□□ -1
SMC4-205ENST00000465563 CCDC81Q6ZN84 652 aa8.8□□□□□ -1
SMC4-205ENST00000465563 ZDHHC15Q96MV8 337 aa8.8□□□□□ -1
SMC4-205ENST00000465563 PTCHD1Q96NR3 888 aa8.8□□□□□ -1
SMC4-205ENST00000465563 GINM1Q9NU53 330 aa8.8□□□□□ -1
SMC4-205ENST00000465563 SLC12A7Q9Y666 1083 aa8.8□□□□□ -1
SMC4-205ENST00000465563 LTBP3Q9NS15 1303 aa8.8□□□□□ -1
SMC4-205ENST00000465563 A0A0G2JLL6 359 aaPredicted RBP8.79□□□□□ -1
SMC4-205ENST00000465563 BUB1BO60566 1050 aaPredicted RBP8.79□□□□□ -1
SMC4-205ENST00000465563 CYBBP04839 570 aa8.79□□□□□ -1
SMC4-205ENST00000465563 PAQR3Q6TCH7 311 aa8.79□□□□□ -1
SMC4-205ENST00000465563 PWWP2AQ96N64 755 aa8.79□□□□□ -1
SMC4-205ENST00000465563 PDLIM7Q9NR12 457 aa8.79□□□□□ -1
SMC4-205ENST00000465563 SRGAP3O43295 1099 aa8.78□□□□□ -1
SMC4-205ENST00000465563 CBFA2T2O43439 604 aa8.78□□□□□ -1
SMC4-205ENST00000465563 RECKO95980 971 aa8.78□□□□□ -1
SMC4-205ENST00000465563 DBHP09172 617 aa8.78□□□□□ -1
SMC4-205ENST00000465563 IFNGR1P15260 489 aa8.78□□□□□ -1
SMC4-205ENST00000465563 VAMP1P23763 118 aa8.78□□□□□ -1
SMC4-205ENST00000465563 BUD31P41223 144 aaPredicted RBP8.78□□□□□ -1
SMC4-205ENST00000465563 EIF6P56537 245 aaKnown RBP8.78□□□□□ -1
SMC4-205ENST00000465563 CORO7P57737 925 aa8.78□□□□□ -1
SMC4-205ENST00000465563 VMACQ2NL98 169 aa8.78□□□□□ -1
SMC4-205ENST00000465563 GNPTABQ3T906 1256 aa8.78□□□□□ -1
SMC4-205ENST00000465563 BICRALQ6AI39 1079 aa8.78□□□□□ -1
SMC4-205ENST00000465563 HAUS7Q99871 368 aa8.78□□□□□ -1
SMC4-205ENST00000465563 WHRNQ9P202 907 aa8.78□□□□□ -1
SMC4-205ENST00000465563 EFR3BQ9Y2G0 817 aa8.78□□□□□ -1
SMC4-205ENST00000465563 IRS2Q9Y4H2 1338 aa8.78□□□□□ -1
SMC4-205ENST00000465563 PFKLP17858 780 aa8.77□□□□□ -1.01
SMC4-205ENST00000465563 SOX9P48436 509 aa8.77□□□□□ -1.01
SMC4-205ENST00000465563 ZNF200P98182 395 aaPredicted RBP8.77□□□□□ -1.01
SMC4-205ENST00000465563 PPP2R5DQ14738 602 aa8.77□□□□□ -1.01
SMC4-205ENST00000465563 XYLT2Q9H1B5 865 aa8.77□□□□□ -1.01
SMC4-205ENST00000465563 PHAXQ9H814 394 aaKnown RBP8.77□□□□□ -1.01
SMC4-205ENST00000465563 L1CAMP32004 1257 aa8.76□□□□□ -1.01
SMC4-205ENST00000465563 NFIXQ14938 502 aa8.76□□□□□ -1.01
SMC4-205ENST00000465563 TARBP2Q15633 366 aaKnown RBP8.76□□□□□ -1.01
SMC4-205ENST00000465563 HEATR6Q6AI08 1181 aaKnown RBP8.76□□□□□ -1.01
SMC4-205ENST00000465563 SP8Q8IXZ3 490 aa8.76□□□□□ -1.01
SMC4-205ENST00000465563 NLGN2Q8NFZ4 835 aa8.76□□□□□ -1.01
SMC4-205ENST00000465563 GBP3Q9H0R5 595 aa8.76□□□□□ -1.01
SMC4-205ENST00000465563 RTEL1Q9NZ71 1219 aa8.76□□□□□ -1.01
SMC4-205ENST00000465563 FOXD2O60548 495 aaPredicted RBP8.75□□□□□ -1.01
SMC4-205ENST00000465563 IGFBP6P24592 240 aaPredicted RBP8.75□□□□□ -1.01
SMC4-205ENST00000465563 GIPRP48546 466 aa8.75□□□□□ -1.01
SMC4-205ENST00000465563 EEF1DP3Q658K8 133 aa8.75□□□□□ -1.01
SMC4-205ENST00000465563 RCSD1Q6JBY9 416 aa8.75□□□□□ -1.01
SMC4-205ENST00000465563 METTL16Q86W50 562 aaKnown RBP8.75□□□□□ -1.01
SMC4-205ENST00000465563 NLGN1Q8N2Q7 840 aa8.75□□□□□ -1.01
SMC4-205ENST00000465563 C19orf47Q8N9M1 422 aaKnown RBP8.75□□□□□ -1.01
SMC4-205ENST00000465563 LINC01356Q8N9X3 169 aa8.75□□□□□ -1.01
SMC4-205ENST00000465563 ADCY4Q8NFM4 1077 aa8.75□□□□□ -1.01
SMC4-205ENST00000465563 OR6P1Q8NGX9 317 aa8.75□□□□□ -1.01
SMC4-205ENST00000465563 GPRASP2Q96D09 838 aa8.75□□□□□ -1.01
SMC4-205ENST00000465563 KRTAP4-2Q9BYR5 136 aa8.75□□□□□ -1.01
SMC4-205ENST00000465563 KLHL25Q9H0H3 589 aa8.75□□□□□ -1.01
SMC4-205ENST00000465563 OTOL1A6NHN0 477 aaPredicted RBP8.74□□□□□ -1.01
SMC4-205ENST00000465563 TACR1P25103 407 aa8.74□□□□□ -1.01
SMC4-205ENST00000465563 SLC7A5Q01650 507 aa8.74□□□□□ -1.01
SMC4-205ENST00000465563 ADAT2Q7Z6V5 191 aaKnown RBP8.74□□□□□ -1.01
SMC4-205ENST00000465563 RASGRP4Q8TDF6 673 aa8.74□□□□□ -1.01
SMC4-205ENST00000465563 PCDHB10Q9UN67 800 aa8.74□□□□□ -1.01
SMC4-205ENST00000465563 ADAMTS20P59510 1910 aa8.74□□□□□ -1.01
SMC4-205ENST00000465563 A0A1W2PQH9 124 aa8.73□□□□□ -1.01
SMC4-205ENST00000465563 F8W031 263 aaPredicted RBP8.73□□□□□ -1.01
SMC4-205ENST00000465563 AURKAO14965 403 aa8.73□□□□□ -1.01
SMC4-205ENST00000465563 PPM1BO75688 479 aa8.73□□□□□ -1.01
SMC4-205ENST00000465563 SYN1P17600 705 aa8.73□□□□□ -1.01
SMC4-205ENST00000465563 FEZF2Q8TBJ5 459 aa8.73□□□□□ -1.01
SMC4-205ENST00000465563 DBR1Q9UK59 544 aaKnown RBP8.73□□□□□ -1.01
SMC4-205ENST00000465563 HCFC2Q9Y5Z7 792 aa8.73□□□□□ -1.01
SMC4-205ENST00000465563 LIMS1P48059 325 aa8.72□□□□□ -1.01
SMC4-205ENST00000465563 PRR5P85299 388 aa8.72□□□□□ -1.01
SMC4-205ENST00000465563 CAP1Q01518 475 aa8.72□□□□□ -1.01
SMC4-205ENST00000465563 MCMBPQ9BTE3 642 aa8.72□□□□□ -1.01
SMC4-205ENST00000465563 LUC7LQ9NQ29 371 aaKnown RBP8.72□□□□□ -1.01
SMC4-205ENST00000465563 STXBP3O00186 592 aa8.71□□□□□ -1.02
SMC4-205ENST00000465563 EPHX1P07099 455 aa8.71□□□□□ -1.02
SMC4-205ENST00000465563 FBLN1P23142 703 aa8.71□□□□□ -1.02
SMC4-205ENST00000465563 CABP7Q86V35 215 aa8.71□□□□□ -1.02
SMC4-205ENST00000465563 FGD4Q96M96 766 aa8.71□□□□□ -1.02
SMC4-205ENST00000465563 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.71□□□□□ -1.02
SMC4-205ENST00000465563 ZC3H12DA2A288 527 aaKnown RBP8.7□□□□□ -1.02
SMC4-205ENST00000465563 VAMP4O75379 141 aa8.7□□□□□ -1.02
SMC4-205ENST00000465563 SEPHS1P49903 392 aa8.7□□□□□ -1.02
SMC4-205ENST00000465563 PPP2R5EQ16537 467 aa8.7□□□□□ -1.02
SMC4-205ENST00000465563 DPY19L1Q2PZI1 675 aa8.7□□□□□ -1.02
SMC4-205ENST00000465563 NT5DC4Q86YG4 428 aa8.7□□□□□ -1.02
SMC4-205ENST00000465563 ZDHHC14Q8IZN3 488 aa8.7□□□□□ -1.02
SMC4-205ENST00000465563 TP53I13Q8NBR0 393 aaPredicted RBP8.7□□□□□ -1.02
SMC4-205ENST00000465563 SYT8Q8NBV8 401 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms