RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 MTMR7Q9Y216 660 aa26.9■■□□□ 1.9
USP42-205ENST00000465073 FGAP02671 866 aa26.89■■□□□ 1.9
USP42-205ENST00000465073 CCDC96Q2M329 555 aa26.89■■□□□ 1.9
USP42-205ENST00000465073 MUM1L1Q5H9M0 696 aa26.89■■□□□ 1.9
USP42-205ENST00000465073 TOMM22Q9NS69 142 aa26.89■■□□□ 1.9
USP42-205ENST00000465073 GNEQ9Y223 722 aaKnown RBP26.89■■□□□ 1.9
USP42-205ENST00000465073 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.88■■□□□ 1.89
USP42-205ENST00000465073 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.88■■□□□ 1.89
USP42-205ENST00000465073 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.88■■□□□ 1.89
USP42-205ENST00000465073 TLR3O15455 904 aaKnown RBP26.88■■□□□ 1.89
USP42-205ENST00000465073 ICAM1P05362 532 aa26.88■■□□□ 1.89
USP42-205ENST00000465073 PPIGQ13427 754 aaKnown RBP eCLIP26.88■■□□□ 1.89
USP42-205ENST00000465073 BTNL9Q6UXG8 535 aa26.88■■□□□ 1.89
USP42-205ENST00000465073 RASGRP2Q7LDG7 609 aa26.88■■□□□ 1.89
USP42-205ENST00000465073 FAM227BQ96M60 508 aa26.88■■□□□ 1.89
USP42-205ENST00000465073 TCP11L1Q9NUJ3 509 aa26.88■■□□□ 1.89
USP42-205ENST00000465073 CABYRO75952 493 aa26.87■■□□□ 1.89
USP42-205ENST00000465073 TOP1P11387 765 aaKnown RBP26.87■■□□□ 1.89
USP42-205ENST00000465073 BEX3Q00994 111 aa26.87■■□□□ 1.89
USP42-205ENST00000465073 IQSEC1Q6DN90 963 aa26.87■■□□□ 1.89
USP42-205ENST00000465073 TLK2Q86UE8 772 aa26.87■■□□□ 1.89
USP42-205ENST00000465073 FAM126BQ8IXS8 530 aa26.87■■□□□ 1.89
USP42-205ENST00000465073 AP5M1Q9H0R1 490 aa26.87■■□□□ 1.89
USP42-205ENST00000465073 RANBP17Q9H2T7 1088 aaKnown RBP26.87■■□□□ 1.89
USP42-205ENST00000465073 ASTN1O14525 1302 aa26.87■■□□□ 1.89
USP42-205ENST00000465073 A0A0D9SFI3 127 aa26.87■■□□□ 1.89
USP42-205ENST00000465073 RRP12Q5JTH9 1297 aaKnown RBP26.87■■□□□ 1.89
USP42-205ENST00000465073 NSMFQ6X4W1 530 aa26.87■■□□□ 1.89
USP42-205ENST00000465073 Q9Y3F1 56 aa26.87■■□□□ 1.89
USP42-205ENST00000465073 ZEB2O60315 1214 aa26.86■■□□□ 1.89
USP42-205ENST00000465073 FSCN1Q16658 493 aaKnown RBP26.86■■□□□ 1.89
USP42-205ENST00000465073 TTBK2Q6IQ55 1244 aa26.86■■□□□ 1.89
USP42-205ENST00000465073 TMEM199Q8N511 208 aa26.86■■□□□ 1.89
USP42-205ENST00000465073 MAFAQ8NHW3 353 aaPredicted RBP26.86■■□□□ 1.89
USP42-205ENST00000465073 MYLIPQ8WY64 445 aa26.86■■□□□ 1.89
USP42-205ENST00000465073 TMEM47Q9BQJ4 181 aa26.86■■□□□ 1.89
USP42-205ENST00000465073 ZMYM6O95789 1325 aa26.85■■□□□ 1.89
USP42-205ENST00000465073 DYNC1LI2O43237 492 aaPredicted RBP26.85■■□□□ 1.89
USP42-205ENST00000465073 HSPD1P10809 573 aaKnown RBP26.85■■□□□ 1.89
USP42-205ENST00000465073 SMPD1P17405 629 aa26.85■■□□□ 1.89
USP42-205ENST00000465073 SLC16A2P36021 539 aa26.85■■□□□ 1.89
USP42-205ENST00000465073 SYDE2Q5VT97 1194 aa26.85■■□□□ 1.89
USP42-205ENST00000465073 TAPT1Q6NXT6 567 aa26.85■■□□□ 1.89
USP42-205ENST00000465073 CXCL17Q6UXB2 119 aa26.85■■□□□ 1.89
USP42-205ENST00000465073 SLC43A3Q8NBI5 491 aa26.85■■□□□ 1.89
USP42-205ENST00000465073 MORC4Q8TE76 937 aa26.85■■□□□ 1.89
USP42-205ENST00000465073 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.85■■□□□ 1.89
USP42-205ENST00000465073 SEZ6LQ9BYH1 1024 aa26.85■■□□□ 1.89
USP42-205ENST00000465073 VTA1Q9NP79 307 aa26.85■■□□□ 1.89
USP42-205ENST00000465073 PDGFCQ9NRA1 345 aa26.85■■□□□ 1.89
USP42-205ENST00000465073 UNC80Q8N2C7 3258 aa26.84■■□□□ 1.89
USP42-205ENST00000465073 CD4P01730 458 aa26.84■■□□□ 1.89
USP42-205ENST00000465073 PCP11498 1178 aaKnown RBP26.83■■□□□ 1.89
USP42-205ENST00000465073 C16orf59Q7L2K0 433 aa26.83■■□□□ 1.89
USP42-205ENST00000465073 EEPD1Q7L9B9 569 aa26.83■■□□□ 1.89
USP42-205ENST00000465073 TTC14Q96N46 770 aa26.83■■□□□ 1.89
USP42-205ENST00000465073 ADD3Q9UEY8 706 aaKnown RBP26.83■■□□□ 1.89
USP42-205ENST00000465073 PNMA2Q9UL42 364 aa26.83■■□□□ 1.89
USP42-205ENST00000465073 DDX49Q9Y6V7 483 aaKnown RBP26.83■■□□□ 1.89
USP42-205ENST00000465073 LOC102724159A0A0B4J2E5 919 aa26.82■■□□□ 1.88
USP42-205ENST00000465073 CSF2RAP15509 400 aa26.82■■□□□ 1.88
USP42-205ENST00000465073 DNAJB2P25686 324 aa26.82■■□□□ 1.88
USP42-205ENST00000465073 NMIQ13287 307 aaPredicted RBP26.82■■□□□ 1.88
USP42-205ENST00000465073 ITGA7Q13683 1181 aa26.82■■□□□ 1.88
USP42-205ENST00000465073 AAMPQ13685 434 aa26.82■■□□□ 1.88
USP42-205ENST00000465073 BAATQ14032 418 aaPredicted RBP26.82■■□□□ 1.88
USP42-205ENST00000465073 PWP2Q15269 919 aaKnown RBP26.82■■□□□ 1.88
USP42-205ENST00000465073 TMEM240Q5SV17 173 aa26.82■■□□□ 1.88
USP42-205ENST00000465073 ZNF589Q86UQ0 364 aaPredicted RBP26.82■■□□□ 1.88
USP42-205ENST00000465073 FBXO16Q8IX29 292 aaPredicted RBP26.82■■□□□ 1.88
USP42-205ENST00000465073 GPCPD1Q9NPB8 672 aa26.82■■□□□ 1.88
USP42-205ENST00000465073 TRIM6-TRIM34B2RNG4 842 aa26.81■■□□□ 1.88
USP42-205ENST00000465073 FOSL2P15408 326 aa26.81■■□□□ 1.88
USP42-205ENST00000465073 MFSD6Q6ZSS7 791 aa26.81■■□□□ 1.88
USP42-205ENST00000465073 PURBQ96QR8 312 aaKnown RBP26.81■■□□□ 1.88
USP42-205ENST00000465073 PPP1R12CQ9BZL4 782 aa26.81■■□□□ 1.88
USP42-205ENST00000465073 LNPKQ9C0E8 428 aa26.81■■□□□ 1.88
USP42-205ENST00000465073 FRMPD2Q68DX3 1309 aaPredicted RBP26.81■■□□□ 1.88
USP42-205ENST00000465073 CCDC171Q6TFL3 1326 aa26.81■■□□□ 1.88
USP42-205ENST00000465073 AKNAD1Q5T1N1 836 aa26.81■■□□□ 1.88
USP42-205ENST00000465073 RASIP1Q5U651 963 aa26.81■■□□□ 1.88
USP42-205ENST00000465073 KIAA1211Q6ZU35 1233 aa26.81■■□□□ 1.88
USP42-205ENST00000465073 COL25A1Q9BXS0 654 aaPredicted RBP26.81■■□□□ 1.88
USP42-205ENST00000465073 PDHBP11177 359 aa26.8■■□□□ 1.88
USP42-205ENST00000465073 MFAP1P55081 439 aaKnown RBP26.8■■□□□ 1.88
USP42-205ENST00000465073 HAND2P61296 217 aa26.8■■□□□ 1.88
USP42-205ENST00000465073 PSRC1Q6PGN9 363 aaPredicted RBP26.8■■□□□ 1.88
USP42-205ENST00000465073 RILPL2Q969X0 211 aa26.8■■□□□ 1.88
USP42-205ENST00000465073 NFIBO00712 420 aa26.79■■□□□ 1.88
USP42-205ENST00000465073 PTGS1P23219 599 aa26.79■■□□□ 1.88
USP42-205ENST00000465073 CYP2C18P33260 490 aa26.79■■□□□ 1.88
USP42-205ENST00000465073 ALDH5A1P51649 535 aaPredicted RBP26.79■■□□□ 1.88
USP42-205ENST00000465073 DUSP28Q4G0W2 176 aa26.79■■□□□ 1.88
USP42-205ENST00000465073 ZNF365Q70YC5 407 aa26.79■■□□□ 1.88
USP42-205ENST00000465073 TIFAQ96CG3 184 aa26.79■■□□□ 1.88
USP42-205ENST00000465073 HIPK3Q9H422 1215 aa26.79■■□□□ 1.88
USP42-205ENST00000465073 RNF41Q9H4P4 317 aaPredicted RBP26.79■■□□□ 1.88
USP42-205ENST00000465073 GRIN2DO15399 1336 aa26.78■■□□□ 1.88
USP42-205ENST00000465073 PTPDC1A2A3K4 754 aa26.78■■□□□ 1.88
USP42-205ENST00000465073 ZNF543Q08ER8 600 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms