RNA–Protein interactions for RNA: ENST00000464626.1

MCF2L2-206, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-206ENST00000464626 TTC14Q96N46 770 aa22.92■■□□□ 1.26
MCF2L2-206ENST00000464626 CCPG1Q9ULG6 757 aa22.92■■□□□ 1.26
MCF2L2-206ENST00000464626 LCTP09848 1927 aa22.92■■□□□ 1.26
MCF2L2-206ENST00000464626 ASTN1O14525 1302 aa22.91■■□□□ 1.26
MCF2L2-206ENST00000464626 MFAP1P55081 439 aaKnown RBP22.91■■□□□ 1.26
MCF2L2-206ENST00000464626 SNAP25P60880 206 aa22.91■■□□□ 1.26
MCF2L2-206ENST00000464626 IRX5P78411 483 aaPredicted RBP22.91■■□□□ 1.26
MCF2L2-206ENST00000464626 SMAD3P84022 425 aaKnown RBP22.91■■□□□ 1.26
MCF2L2-206ENST00000464626 TNFAIP2Q03169 654 aa22.91■■□□□ 1.26
MCF2L2-206ENST00000464626 RRP12Q5JTH9 1297 aaKnown RBP22.91■■□□□ 1.26
MCF2L2-206ENST00000464626 GNASQ5JWF2 1037 aa22.91■■□□□ 1.26
MCF2L2-206ENST00000464626 AKNAD1Q5T1N1 836 aa22.91■■□□□ 1.26
MCF2L2-206ENST00000464626 CHD1LQ86WJ1 897 aa22.91■■□□□ 1.26
MCF2L2-206ENST00000464626 TBX21Q9UL17 535 aa22.91■■□□□ 1.26
MCF2L2-206ENST00000464626 GNEQ9Y223 722 aaKnown RBP22.91■■□□□ 1.26
MCF2L2-206ENST00000464626 SDSP20132 328 aa22.9■■□□□ 1.26
MCF2L2-206ENST00000464626 NT5C2P49902 561 aa22.9■■□□□ 1.26
MCF2L2-206ENST00000464626 NUCB1Q02818 461 aa22.9■■□□□ 1.26
MCF2L2-206ENST00000464626 ZNF697Q5TEC3 545 aa22.9■■□□□ 1.26
MCF2L2-206ENST00000464626 SYDE2Q5VT97 1194 aa22.9■■□□□ 1.26
MCF2L2-206ENST00000464626 TTBK2Q6IQ55 1244 aa22.9■■□□□ 1.26
MCF2L2-206ENST00000464626 MFSD6Q6ZSS7 791 aa22.9■■□□□ 1.26
MCF2L2-206ENST00000464626 PLEKHM2Q8IWE5 1019 aa22.9■■□□□ 1.26
MCF2L2-206ENST00000464626 MORC4Q8TE76 937 aa22.9■■□□□ 1.26
MCF2L2-206ENST00000464626 RILPL2Q969X0 211 aa22.9■■□□□ 1.26
MCF2L2-206ENST00000464626 GUCD1Q96NT3 240 aa22.9■■□□□ 1.26
MCF2L2-206ENST00000464626 PNMA2Q9UL42 364 aa22.9■■□□□ 1.26
MCF2L2-206ENST00000464626 MTMR7Q9Y216 660 aa22.9■■□□□ 1.26
MCF2L2-206ENST00000464626 CUL9Q8IWT3 2517 aa22.9■■□□□ 1.26
MCF2L2-206ENST00000464626 LOC102724159A0A0B4J2E5 919 aa22.89■■□□□ 1.25
MCF2L2-206ENST00000464626 A0A0U1RQG5 324 aaPredicted RBP22.89■■□□□ 1.25
MCF2L2-206ENST00000464626 ARVCFO00192 962 aa22.89■■□□□ 1.25
MCF2L2-206ENST00000464626 TIMP1P01033 207 aa22.89■■□□□ 1.25
MCF2L2-206ENST00000464626 EPHB4P54760 987 aa22.89■■□□□ 1.25
MCF2L2-206ENST00000464626 HAND2P61296 217 aa22.89■■□□□ 1.25
MCF2L2-206ENST00000464626 FPGSQ05932 587 aa22.89■■□□□ 1.25
MCF2L2-206ENST00000464626 PWP2Q15269 919 aaKnown RBP22.89■■□□□ 1.25
MCF2L2-206ENST00000464626 B4GALNT3Q6L9W6 998 aa22.89■■□□□ 1.25
MCF2L2-206ENST00000464626 RNF41Q9H4P4 317 aaPredicted RBP22.89■■□□□ 1.25
MCF2L2-206ENST00000464626 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.88■■□□□ 1.25
MCF2L2-206ENST00000464626 SNHG28P0DPA3 235 aa22.88■■□□□ 1.25
MCF2L2-206ENST00000464626 PDHBP11177 359 aa22.88■■□□□ 1.25
MCF2L2-206ENST00000464626 SLC16A2P36021 539 aa22.88■■□□□ 1.25
MCF2L2-206ENST00000464626 IQSEC1Q6DN90 963 aa22.88■■□□□ 1.25
MCF2L2-206ENST00000464626 VTA1Q9NP79 307 aa22.88■■□□□ 1.25
MCF2L2-206ENST00000464626 Q9Y3F1 56 aa22.88■■□□□ 1.25
MCF2L2-206ENST00000464626 LAMA4Q16363 1823 aa22.87■■□□□ 1.25
MCF2L2-206ENST00000464626 CABYRO75952 493 aa22.87■■□□□ 1.25
MCF2L2-206ENST00000464626 IGHDP01880 384 aa22.87■■□□□ 1.25
MCF2L2-206ENST00000464626 TAPT1Q6NXT6 567 aa22.87■■□□□ 1.25
MCF2L2-206ENST00000464626 NSMFQ6X4W1 530 aa22.87■■□□□ 1.25
MCF2L2-206ENST00000464626 TBC1D10CQ8IV04 446 aa22.87■■□□□ 1.25
MCF2L2-206ENST00000464626 SMPD1P17405 629 aa22.86■■□□□ 1.25
MCF2L2-206ENST00000464626 ZNF543Q08ER8 600 aa22.86■■□□□ 1.25
MCF2L2-206ENST00000464626 MFSD5Q6N075 450 aa22.86■■□□□ 1.25
MCF2L2-206ENST00000464626 TLK2Q86UE8 772 aa22.86■■□□□ 1.25
MCF2L2-206ENST00000464626 FAM126BQ8IXS8 530 aa22.86■■□□□ 1.25
MCF2L2-206ENST00000464626 SLC43A3Q8NBI5 491 aa22.86■■□□□ 1.25
MCF2L2-206ENST00000464626 ESR2Q92731 530 aa22.86■■□□□ 1.25
MCF2L2-206ENST00000464626 VTI1AQ96AJ9 217 aa22.86■■□□□ 1.25
MCF2L2-206ENST00000464626 RNPC3Q96LT9 517 aaKnown RBP22.86■■□□□ 1.25
MCF2L2-206ENST00000464626 SEZ6LQ9BYH1 1024 aa22.86■■□□□ 1.25
MCF2L2-206ENST00000464626 GPCPD1Q9NPB8 672 aa22.86■■□□□ 1.25
MCF2L2-206ENST00000464626 ADD3Q9UEY8 706 aaKnown RBP22.86■■□□□ 1.25
MCF2L2-206ENST00000464626 FRMPD2Q68DX3 1309 aaPredicted RBP22.85■■□□□ 1.25
MCF2L2-206ENST00000464626 BEX3Q00994 111 aa22.85■■□□□ 1.25
MCF2L2-206ENST00000464626 BAATQ14032 418 aaPredicted RBP22.85■■□□□ 1.25
MCF2L2-206ENST00000464626 FSCN1Q16658 493 aaKnown RBP22.85■■□□□ 1.25
MCF2L2-206ENST00000464626 NOL8Q76FK4 1167 aaKnown RBP22.85■■□□□ 1.25
MCF2L2-206ENST00000464626 DGKHQ86XP1 1220 aa22.85■■□□□ 1.25
MCF2L2-206ENST00000464626 AP5M1Q9H0R1 490 aa22.85■■□□□ 1.25
MCF2L2-206ENST00000464626 SEMA6BQ9H3T3 888 aa22.85■■□□□ 1.25
MCF2L2-206ENST00000464626 WDR19Q8NEZ3 1342 aa22.84■■□□□ 1.25
MCF2L2-206ENST00000464626 TMEM265A0A087WTH1 108 aa22.84■■□□□ 1.25
MCF2L2-206ENST00000464626 HIP1O00291 1037 aa22.84■■□□□ 1.25
MCF2L2-206ENST00000464626 NFIBO00712 420 aa22.84■■□□□ 1.25
MCF2L2-206ENST00000464626 ZNF213O14771 459 aa22.84■■□□□ 1.25
MCF2L2-206ENST00000464626 TLR3O15455 904 aaKnown RBP22.84■■□□□ 1.25
MCF2L2-206ENST00000464626 FBXO16Q8IX29 292 aaPredicted RBP22.84■■□□□ 1.25
MCF2L2-206ENST00000464626 FAM161BQ96MY7 647 aa22.84■■□□□ 1.25
MCF2L2-206ENST00000464626 PURBQ96QR8 312 aaKnown RBP22.84■■□□□ 1.25
MCF2L2-206ENST00000464626 PDGFCQ9NRA1 345 aa22.84■■□□□ 1.25
MCF2L2-206ENST00000464626 NEDD4P46934 1319 aa22.83■■□□□ 1.25
MCF2L2-206ENST00000464626 DYNC1LI2O43237 492 aaPredicted RBP22.83■■□□□ 1.25
MCF2L2-206ENST00000464626 ZEB2O60315 1214 aa22.83■■□□□ 1.25
MCF2L2-206ENST00000464626 CD4P01730 458 aa22.83■■□□□ 1.25
MCF2L2-206ENST00000464626 ALDH5A1P51649 535 aaPredicted RBP22.83■■□□□ 1.25
MCF2L2-206ENST00000464626 CCDC178Q5BJE1 867 aa22.83■■□□□ 1.25
MCF2L2-206ENST00000464626 GPATCH4Q5T3I0 446 aaKnown RBP22.83■■□□□ 1.25
MCF2L2-206ENST00000464626 CXCL17Q6UXB2 119 aa22.83■■□□□ 1.25
MCF2L2-206ENST00000464626 EXOC6Q8TAG9 804 aa22.83■■□□□ 1.25
MCF2L2-206ENST00000464626 CLEC4DQ8WXI8 215 aa22.83■■□□□ 1.25
MCF2L2-206ENST00000464626 YTHDC1Q96MU7 727 aaKnown RBP22.83■■□□□ 1.25
MCF2L2-206ENST00000464626 DDX49Q9Y6V7 483 aaKnown RBP22.83■■□□□ 1.25
MCF2L2-206ENST00000464626 DLL1O00548 723 aa22.82■■□□□ 1.24
MCF2L2-206ENST00000464626 PPIGQ13427 754 aaKnown RBP eCLIP22.82■■□□□ 1.24
MCF2L2-206ENST00000464626 DUSP28Q4G0W2 176 aa22.82■■□□□ 1.24
MCF2L2-206ENST00000464626 CWC27Q6UX04 472 aaKnown RBP22.82■■□□□ 1.24
MCF2L2-206ENST00000464626 EEPD1Q7L9B9 569 aa22.82■■□□□ 1.24
MCF2L2-206ENST00000464626 ANKS1AQ92625 1134 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms