RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 ZNF445P59923 1031 aa5.29□□□□□ -1.56
GARNL3-213ENST00000464616 ZNF200P98182 395 aaPredicted RBP5.29□□□□□ -1.56
GARNL3-213ENST00000464616 GNPTABQ3T906 1256 aa5.29□□□□□ -1.56
GARNL3-213ENST00000464616 RTP2Q5QGT7 225 aa5.29□□□□□ -1.56
GARNL3-213ENST00000464616 AXDND1Q5T1B0 1012 aaPredicted RBP5.29□□□□□ -1.56
GARNL3-213ENST00000464616 UNC5AQ6ZN44 842 aa5.29□□□□□ -1.56
GARNL3-213ENST00000464616 PDLIM7Q9NR12 457 aa5.29□□□□□ -1.56
GARNL3-213ENST00000464616 DIS3Q9Y2L1 958 aaKnown RBP5.29□□□□□ -1.56
GARNL3-213ENST00000464616 IRS4O14654 1257 aaPredicted RBP5.28□□□□□ -1.56
GARNL3-213ENST00000464616 PPM1BO75688 479 aa5.28□□□□□ -1.56
GARNL3-213ENST00000464616 L1CAMP32004 1257 aa5.28□□□□□ -1.56
GARNL3-213ENST00000464616 MVKQ03426 396 aa5.28□□□□□ -1.56
GARNL3-213ENST00000464616 COL9A2Q14055 689 aaPredicted RBP5.28□□□□□ -1.56
GARNL3-213ENST00000464616 CBX2Q14781 532 aaPredicted RBP5.28□□□□□ -1.56
GARNL3-213ENST00000464616 PLEKHN1Q494U1 663 aaPredicted RBP5.28□□□□□ -1.56
GARNL3-213ENST00000464616 HEATR6Q6AI08 1181 aaKnown RBP5.28□□□□□ -1.56
GARNL3-213ENST00000464616 IGDCC3Q8IVU1 814 aa5.28□□□□□ -1.56
GARNL3-213ENST00000464616 ZNF654Q8IZM8 581 aa5.28□□□□□ -1.56
GARNL3-213ENST00000464616 LINC01356Q8N9X3 169 aa5.28□□□□□ -1.56
GARNL3-213ENST00000464616 TMEM52Q8NDY8 209 aa5.28□□□□□ -1.56
GARNL3-213ENST00000464616 FEZF2Q8TBJ5 459 aa5.28□□□□□ -1.56
GARNL3-213ENST00000464616 USP33Q8TEY7 942 aa5.28□□□□□ -1.56
GARNL3-213ENST00000464616 CPLX3Q8WVH0 158 aa5.28□□□□□ -1.56
GARNL3-213ENST00000464616 SPATA32Q96LK8 384 aa5.28□□□□□ -1.56
GARNL3-213ENST00000464616 SUGT1Q9Y2Z0 365 aa5.28□□□□□ -1.56
GARNL3-213ENST00000464616 ZNF451Q9Y4E5 1061 aa5.28□□□□□ -1.56
GARNL3-213ENST00000464616 A0A0G2JLL6 359 aaPredicted RBP5.27□□□□□ -1.57
GARNL3-213ENST00000464616 OTOL1A6NHN0 477 aaPredicted RBP5.27□□□□□ -1.57
GARNL3-213ENST00000464616 KRTAP9-7A8MTY7 169 aa5.27□□□□□ -1.57
GARNL3-213ENST00000464616 FGF10O15520 208 aaPredicted RBP5.27□□□□□ -1.57
GARNL3-213ENST00000464616 CELA3BP08861 270 aa5.27□□□□□ -1.57
GARNL3-213ENST00000464616 RANGAP1P46060 587 aaPredicted RBP5.27□□□□□ -1.57
GARNL3-213ENST00000464616 KCNC1P48547 511 aa5.27□□□□□ -1.57
GARNL3-213ENST00000464616 SEPHS1P49903 392 aa5.27□□□□□ -1.57
GARNL3-213ENST00000464616 EIF6P56537 245 aaKnown RBP5.27□□□□□ -1.57
GARNL3-213ENST00000464616 RBM10P98175 930 aaKnown RBP5.27□□□□□ -1.57
GARNL3-213ENST00000464616 FANCCQ00597 558 aa5.27□□□□□ -1.57
GARNL3-213ENST00000464616 PPP2R5EQ16537 467 aa5.27□□□□□ -1.57
GARNL3-213ENST00000464616 CCDC81Q6ZN84 652 aa5.27□□□□□ -1.57
GARNL3-213ENST00000464616 RUFY4Q6ZNE9 571 aa5.27□□□□□ -1.57
GARNL3-213ENST00000464616 PPFIBP1Q86W92 1011 aa5.27□□□□□ -1.57
GARNL3-213ENST00000464616 TMEFF1Q8IYR6 380 aa5.27□□□□□ -1.57
GARNL3-213ENST00000464616 ADCY4Q8NFM4 1077 aa5.27□□□□□ -1.57
GARNL3-213ENST00000464616 PTCHD1Q96NR3 888 aa5.27□□□□□ -1.57
GARNL3-213ENST00000464616 FCRL3Q96P31 734 aaPredicted RBP5.27□□□□□ -1.57
GARNL3-213ENST00000464616 USP40Q9NVE5 1235 aa5.27□□□□□ -1.57
GARNL3-213ENST00000464616 RTEL1Q9NZ71 1219 aa5.27□□□□□ -1.57
GARNL3-213ENST00000464616 WHRNQ9P202 907 aa5.27□□□□□ -1.57
GARNL3-213ENST00000464616 NUDT5Q9UKK9 219 aa5.27□□□□□ -1.57
GARNL3-213ENST00000464616 PCDHA5Q9Y5H7 936 aa5.27□□□□□ -1.57
GARNL3-213ENST00000464616 A0A087WZG4 1122 aa5.26□□□□□ -1.57
GARNL3-213ENST00000464616 SHOXO15266 292 aa5.26□□□□□ -1.57
GARNL3-213ENST00000464616 DBHP09172 617 aa5.26□□□□□ -1.57
GARNL3-213ENST00000464616 LIMS1P48059 325 aa5.26□□□□□ -1.57
GARNL3-213ENST00000464616 CORO7P57737 925 aa5.26□□□□□ -1.57
GARNL3-213ENST00000464616 ZYXQ15942 572 aaKnown RBP5.26□□□□□ -1.57
GARNL3-213ENST00000464616 EEF1DP3Q658K8 133 aa5.26□□□□□ -1.57
GARNL3-213ENST00000464616 RBBP8NLQ8NC74 664 aaPredicted RBP5.26□□□□□ -1.57
GARNL3-213ENST00000464616 ALG3Q92685 438 aa5.26□□□□□ -1.57
GARNL3-213ENST00000464616 PHAXQ9H814 394 aaKnown RBP5.26□□□□□ -1.57
GARNL3-213ENST00000464616 LUC7LQ9NQ29 371 aaKnown RBP5.26□□□□□ -1.57
GARNL3-213ENST00000464616 SUSD2Q9UGT4 822 aa5.26□□□□□ -1.57
GARNL3-213ENST00000464616 ZNF214Q9UL59 606 aaPredicted RBP5.26□□□□□ -1.57
GARNL3-213ENST00000464616 PMF1-BGLAPU3KQ54 211 aa5.26□□□□□ -1.57
GARNL3-213ENST00000464616 ZC3H12DA2A288 527 aaKnown RBP5.25□□□□□ -1.57
GARNL3-213ENST00000464616 SCAMP3O14828 347 aaKnown RBP5.25□□□□□ -1.57
GARNL3-213ENST00000464616 SRGAP3O43295 1099 aa5.25□□□□□ -1.57
GARNL3-213ENST00000464616 MSL3P1P0C860 447 aa5.25□□□□□ -1.57
GARNL3-213ENST00000464616 NCAM1P13591 858 aa5.25□□□□□ -1.57
GARNL3-213ENST00000464616 IFNGR1P15260 489 aa5.25□□□□□ -1.57
GARNL3-213ENST00000464616 PRR5P85299 388 aa5.25□□□□□ -1.57
GARNL3-213ENST00000464616 AMPD2Q01433 879 aa5.25□□□□□ -1.57
GARNL3-213ENST00000464616 SLC7A5Q01650 507 aa5.25□□□□□ -1.57
GARNL3-213ENST00000464616 DPY19L1Q2PZI1 675 aa5.25□□□□□ -1.57
GARNL3-213ENST00000464616 LSRQ86X29 649 aaPredicted RBP5.25□□□□□ -1.57
GARNL3-213ENST00000464616 CXorf38Q8TB03 319 aa5.25□□□□□ -1.57
GARNL3-213ENST00000464616 HAUS7Q99871 368 aa5.25□□□□□ -1.57
GARNL3-213ENST00000464616 SRRTQ9BXP5 876 aaKnown RBP5.25□□□□□ -1.57
GARNL3-213ENST00000464616 XYLT2Q9H1B5 865 aa5.25□□□□□ -1.57
GARNL3-213ENST00000464616 EPB41L4AQ9HCS5 686 aaPredicted RBP5.25□□□□□ -1.57
GARNL3-213ENST00000464616 EFR3BQ9Y2G0 817 aa5.25□□□□□ -1.57
GARNL3-213ENST00000464616 TRBV23OR9-2A0A075B6M9 112 aa5.24□□□□□ -1.57
GARNL3-213ENST00000464616 STXBP3O00186 592 aa5.24□□□□□ -1.57
GARNL3-213ENST00000464616 FOXO4P98177 505 aa5.24□□□□□ -1.57
GARNL3-213ENST00000464616 PLP2Q04941 152 aa5.24□□□□□ -1.57
GARNL3-213ENST00000464616 PAK2Q13177 524 aa5.24□□□□□ -1.57
GARNL3-213ENST00000464616 PRRT2Q7Z6L0 340 aaPredicted RBP5.24□□□□□ -1.57
GARNL3-213ENST00000464616 LZTR1Q8N653 840 aa5.24□□□□□ -1.57
GARNL3-213ENST00000464616 SYT8Q8NBV8 401 aa5.24□□□□□ -1.57
GARNL3-213ENST00000464616 OR6P1Q8NGX9 317 aa5.24□□□□□ -1.57
GARNL3-213ENST00000464616 GINM1Q9NU53 330 aa5.24□□□□□ -1.57
GARNL3-213ENST00000464616 VAMP4O75379 141 aa5.23□□□□□ -1.57
GARNL3-213ENST00000464616 PAMP19021 973 aa5.23□□□□□ -1.57
GARNL3-213ENST00000464616 MFAP1P55081 439 aaKnown RBP5.23□□□□□ -1.57
GARNL3-213ENST00000464616 DBX2Q6ZNG2 339 aa5.23□□□□□ -1.57
GARNL3-213ENST00000464616 CRACR2BQ8N4Y2 399 aaPredicted RBP5.23□□□□□ -1.57
GARNL3-213ENST00000464616 PPP1R14AQ96A00 147 aa5.23□□□□□ -1.57
GARNL3-213ENST00000464616 BORCS6Q96GS4 357 aa5.23□□□□□ -1.57
GARNL3-213ENST00000464616 PEX11GQ96HA9 241 aa5.23□□□□□ -1.57
GARNL3-213ENST00000464616 FGD4Q96M96 766 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms