RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 PPP4R3BQ5MIZ7 849 aa17.13■□□□□ 0.33
ALMS1-202ENST00000464408 ANKRD33Q7Z3H0 272 aa17.13■□□□□ 0.33
ALMS1-202ENST00000464408 DCAF4Q8WV16 495 aa17.13■□□□□ 0.33
ALMS1-202ENST00000464408 RANBP17Q9H2T7 1088 aaKnown RBP17.13■□□□□ 0.33
ALMS1-202ENST00000464408 GPCPD1Q9NPB8 672 aa17.13■□□□□ 0.33
ALMS1-202ENST00000464408 PDGFCQ9NRA1 345 aa17.13■□□□□ 0.33
ALMS1-202ENST00000464408 TMEM39AQ9NV64 488 aa17.13■□□□□ 0.33
ALMS1-202ENST00000464408 CYP39A1Q9NYL5 469 aa17.13■□□□□ 0.33
ALMS1-202ENST00000464408 CCPG1Q9ULG6 757 aa17.13■□□□□ 0.33
ALMS1-202ENST00000464408 ZMYM6O95789 1325 aa17.13■□□□□ 0.33
ALMS1-202ENST00000464408 CUL9Q8IWT3 2517 aa17.12■□□□□ 0.33
ALMS1-202ENST00000464408 TOP1P11387 765 aaKnown RBP17.12■□□□□ 0.33
ALMS1-202ENST00000464408 RAG1P15918 1043 aa17.12■□□□□ 0.33
ALMS1-202ENST00000464408 SDSP20132 328 aa17.12■□□□□ 0.33
ALMS1-202ENST00000464408 TKFCQ3LXA3 575 aa17.12■□□□□ 0.33
ALMS1-202ENST00000464408 NSMFQ6X4W1 530 aa17.12■□□□□ 0.33
ALMS1-202ENST00000464408 EEPD1Q7L9B9 569 aa17.12■□□□□ 0.33
ALMS1-202ENST00000464408 CHD1LQ86WJ1 897 aa17.12■□□□□ 0.33
ALMS1-202ENST00000464408 NUP133Q8WUM0 1156 aa17.12■□□□□ 0.33
ALMS1-202ENST00000464408 NEDD4P46934 1319 aa17.12■□□□□ 0.33
ALMS1-202ENST00000464408 NFIBO00712 420 aa17.11■□□□□ 0.33
ALMS1-202ENST00000464408 ICAM1P05362 532 aa17.11■□□□□ 0.33
ALMS1-202ENST00000464408 NUCB1Q02818 461 aa17.11■□□□□ 0.33
ALMS1-202ENST00000464408 TNFAIP2Q03169 654 aa17.11■□□□□ 0.33
ALMS1-202ENST00000464408 GNASQ5JWF2 1037 aa17.11■□□□□ 0.33
ALMS1-202ENST00000464408 SYDE2Q5VT97 1194 aa17.11■□□□□ 0.33
ALMS1-202ENST00000464408 FAM109BQ6ICB4 259 aaPredicted RBP17.11■□□□□ 0.33
ALMS1-202ENST00000464408 BTNL9Q6UXG8 535 aa17.11■□□□□ 0.33
ALMS1-202ENST00000464408 FBXO16Q8IX29 292 aaPredicted RBP17.11■□□□□ 0.33
ALMS1-202ENST00000464408 RWDD1Q9H446 243 aaPredicted RBP17.11■□□□□ 0.33
ALMS1-202ENST00000464408 TCP11L1Q9NUJ3 509 aa17.11■□□□□ 0.33
ALMS1-202ENST00000464408 DCDC2CA8MYV0 355 aa17.1■□□□□ 0.33
ALMS1-202ENST00000464408 PDHBP11177 359 aa17.1■□□□□ 0.33
ALMS1-202ENST00000464408 SMPD1P17405 629 aa17.1■□□□□ 0.33
ALMS1-202ENST00000464408 CDK7P50613 346 aa17.1■□□□□ 0.33
ALMS1-202ENST00000464408 AKNAD1Q5T1N1 836 aa17.1■□□□□ 0.33
ALMS1-202ENST00000464408 TAPT1Q6NXT6 567 aa17.1■□□□□ 0.33
ALMS1-202ENST00000464408 NOL8Q76FK4 1167 aaKnown RBP17.1■□□□□ 0.33
ALMS1-202ENST00000464408 PCSK9Q8NBP7 692 aaKnown RBP17.1■□□□□ 0.33
ALMS1-202ENST00000464408 VTI1AQ96AJ9 217 aa17.1■□□□□ 0.33
ALMS1-202ENST00000464408 GLT1D1Q96MS3 346 aa17.1■□□□□ 0.33
ALMS1-202ENST00000464408 TOX2Q96NM4 488 aa17.1■□□□□ 0.33
ALMS1-202ENST00000464408 ZKSCAN3Q9BRR0 538 aa17.1■□□□□ 0.33
ALMS1-202ENST00000464408 TBX21Q9UL17 535 aa17.1■□□□□ 0.33
ALMS1-202ENST00000464408 GNEQ9Y223 722 aaKnown RBP17.1■□□□□ 0.33
ALMS1-202ENST00000464408 ELP1O95163 1332 aa17.1■□□□□ 0.33
ALMS1-202ENST00000464408 A0A0U1RQG5 324 aaPredicted RBP17.09■□□□□ 0.33
ALMS1-202ENST00000464408 ASB14A6NK59 587 aa17.09■□□□□ 0.33
ALMS1-202ENST00000464408 FPGSQ05932 587 aa17.09■□□□□ 0.33
ALMS1-202ENST00000464408 BAATQ14032 418 aaPredicted RBP17.09■□□□□ 0.33
ALMS1-202ENST00000464408 ZNF697Q5TEC3 545 aa17.09■□□□□ 0.33
ALMS1-202ENST00000464408 CWC27Q6UX04 472 aaKnown RBP17.09■□□□□ 0.33
ALMS1-202ENST00000464408 CXCL17Q6UXB2 119 aa17.09■□□□□ 0.33
ALMS1-202ENST00000464408 MFSD6Q6ZSS7 791 aa17.09■□□□□ 0.33
ALMS1-202ENST00000464408 TLK2Q86UE8 772 aa17.09■□□□□ 0.33
ALMS1-202ENST00000464408 RNPC3Q96LT9 517 aaKnown RBP17.09■□□□□ 0.33
ALMS1-202ENST00000464408 TTYH1Q9H313 450 aaPredicted RBP17.09■□□□□ 0.33
ALMS1-202ENST00000464408 CPVLQ9H3G5 476 aa17.09■□□□□ 0.33
ALMS1-202ENST00000464408 SPC25Q9HBM1 224 aa17.09■□□□□ 0.33
ALMS1-202ENST00000464408 ARVCFO00192 962 aa17.08■□□□□ 0.32
ALMS1-202ENST00000464408 NKX3-2P78367 333 aa17.08■□□□□ 0.32
ALMS1-202ENST00000464408 SLC30A10Q6XR72 485 aa17.08■□□□□ 0.32
ALMS1-202ENST00000464408 TICAM2Q86XR7 235 aa17.08■□□□□ 0.32
ALMS1-202ENST00000464408 CLEC4DQ8WXI8 215 aa17.08■□□□□ 0.32
ALMS1-202ENST00000464408 OSBPL3Q9H4L5 887 aa17.08■□□□□ 0.32
ALMS1-202ENST00000464408 DYNC1LI2O43237 492 aaPredicted RBP17.07■□□□□ 0.32
ALMS1-202ENST00000464408 TIMP1P01033 207 aa17.07■□□□□ 0.32
ALMS1-202ENST00000464408 GOLGA8HP0CJ92 632 aa17.07■□□□□ 0.32
ALMS1-202ENST00000464408 ZNF543Q08ER8 600 aa17.07■□□□□ 0.32
ALMS1-202ENST00000464408 FSCN1Q16658 493 aaKnown RBP17.07■□□□□ 0.32
ALMS1-202ENST00000464408 C16orf59Q7L2K0 433 aa17.07■□□□□ 0.32
ALMS1-202ENST00000464408 FAM126BQ8IXS8 530 aa17.07■□□□□ 0.32
ALMS1-202ENST00000464408 MORC4Q8TE76 937 aa17.07■□□□□ 0.32
ALMS1-202ENST00000464408 PPP1R12CQ9BZL4 782 aa17.07■□□□□ 0.32
ALMS1-202ENST00000464408 IL25Q9H293 177 aa17.07■□□□□ 0.32
ALMS1-202ENST00000464408 SEMA6BQ9H3T3 888 aa17.07■□□□□ 0.32
ALMS1-202ENST00000464408 PRUNE2Q8WUY3 3088 aa17.06■□□□□ 0.32
ALMS1-202ENST00000464408 MYH6P13533 1939 aa17.06■□□□□ 0.32
ALMS1-202ENST00000464408 GRIN2DO15399 1336 aa17.06■□□□□ 0.32
ALMS1-202ENST00000464408 PTPDC1A2A3K4 754 aa17.06■□□□□ 0.32
ALMS1-202ENST00000464408 DLL1O00548 723 aa17.06■□□□□ 0.32
ALMS1-202ENST00000464408 SNHG28P0DPA3 235 aa17.06■□□□□ 0.32
ALMS1-202ENST00000464408 CALML3P27482 149 aa17.06■□□□□ 0.32
ALMS1-202ENST00000464408 ALDH5A1P51649 535 aaPredicted RBP17.06■□□□□ 0.32
ALMS1-202ENST00000464408 SMAD3P84022 425 aaKnown RBP17.06■□□□□ 0.32
ALMS1-202ENST00000464408 AAMPQ13685 434 aa17.06■□□□□ 0.32
ALMS1-202ENST00000464408 CDX2Q99626 313 aaPredicted RBP17.06■□□□□ 0.32
ALMS1-202ENST00000464408 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.06■□□□□ 0.32
ALMS1-202ENST00000464408 MROH7Q68CQ1 1323 aa17.05■□□□□ 0.32
ALMS1-202ENST00000464408 KDM4AO75164 1064 aa17.05■□□□□ 0.32
ALMS1-202ENST00000464408 PSMC6P62333 389 aa17.05■□□□□ 0.32
ALMS1-202ENST00000464408 MFSD5Q6N075 450 aa17.05■□□□□ 0.32
ALMS1-202ENST00000464408 KIAA1211Q6ZU35 1233 aa17.05■□□□□ 0.32
ALMS1-202ENST00000464408 TTC14Q96N46 770 aa17.05■□□□□ 0.32
ALMS1-202ENST00000464408 UBA5Q9GZZ9 404 aa17.05■□□□□ 0.32
ALMS1-202ENST00000464408 VTA1Q9NP79 307 aa17.05■□□□□ 0.32
ALMS1-202ENST00000464408 DIAPH3Q9NSV4 1193 aa17.05■□□□□ 0.32
ALMS1-202ENST00000464408 UMODL1Q5DID0 1318 aa17.04■□□□□ 0.32
ALMS1-202ENST00000464408 VCANP13611 3396 aa17.04■□□□□ 0.32
ALMS1-202ENST00000464408 B4E1Z4 1266 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms