RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 C7orf61Q8IZ16 206 aa6.25□□□□□ -1.41
PTPN12-210ENST00000464313 LGR4Q9BXB1 951 aa6.25□□□□□ -1.41
PTPN12-210ENST00000464313 XYLT2Q9H1B5 865 aa6.25□□□□□ -1.41
PTPN12-210ENST00000464313 PIF1Q9H611 641 aa6.25□□□□□ -1.41
PTPN12-210ENST00000464313 ZSWIM4Q9H7M6 989 aa6.25□□□□□ -1.41
PTPN12-210ENST00000464313 GFOD1Q9NXC2 390 aa6.25□□□□□ -1.41
PTPN12-210ENST00000464313 SUSD2Q9UGT4 822 aa6.25□□□□□ -1.41
PTPN12-210ENST00000464313 KCNH3Q9ULD8 1083 aa6.25□□□□□ -1.41
PTPN12-210ENST00000464313 MSRB2Q9Y3D2 182 aa6.25□□□□□ -1.41
PTPN12-210ENST00000464313 PCDHB12Q9Y5F1 795 aa6.25□□□□□ -1.41
PTPN12-210ENST00000464313 FAM221BA6H8Z2 402 aa6.24□□□□□ -1.41
PTPN12-210ENST00000464313 OTOL1A6NHN0 477 aaPredicted RBP6.24□□□□□ -1.41
PTPN12-210ENST00000464313 SUSD5O60279 629 aa6.24□□□□□ -1.41
PTPN12-210ENST00000464313 CD247P20963 164 aa6.24□□□□□ -1.41
PTPN12-210ENST00000464313 TEKQ02763 1124 aa6.24□□□□□ -1.41
PTPN12-210ENST00000464313 NCAPHQ15003 741 aa6.24□□□□□ -1.41
PTPN12-210ENST00000464313 SOGA3Q5TF21 947 aa6.24□□□□□ -1.41
PTPN12-210ENST00000464313 HEATR6Q6AI08 1181 aaKnown RBP6.24□□□□□ -1.41
PTPN12-210ENST00000464313 SPPL2CQ8IUH8 684 aa6.24□□□□□ -1.41
PTPN12-210ENST00000464313 ADCY4Q8NFM4 1077 aa6.24□□□□□ -1.41
PTPN12-210ENST00000464313 BRF1Q92994 677 aa6.24□□□□□ -1.41
PTPN12-210ENST00000464313 SYTL4Q96C24 671 aaPredicted RBP6.24□□□□□ -1.41
PTPN12-210ENST00000464313 SRPK1Q96SB4 655 aaKnown RBP6.24□□□□□ -1.41
PTPN12-210ENST00000464313 KLHL25Q9H0H3 589 aa6.24□□□□□ -1.41
PTPN12-210ENST00000464313 GP6Q9HCN6 339 aa6.24□□□□□ -1.41
PTPN12-210ENST00000464313 SNTG2Q9NY99 539 aa6.24□□□□□ -1.41
PTPN12-210ENST00000464313 APEX2Q9UBZ4 518 aa6.24□□□□□ -1.41
PTPN12-210ENST00000464313 NOTOA8MTQ0 251 aa6.23□□□□□ -1.41
PTPN12-210ENST00000464313 PRAMEF1O95521 474 aa6.23□□□□□ -1.41
PTPN12-210ENST00000464313 NMIQ13287 307 aaPredicted RBP6.23□□□□□ -1.41
PTPN12-210ENST00000464313 ADGRF1Q5T601 910 aa6.23□□□□□ -1.41
PTPN12-210ENST00000464313 TMEM151BQ8IW70 566 aa6.23□□□□□ -1.41
PTPN12-210ENST00000464313 FEZF2Q8TBJ5 459 aa6.23□□□□□ -1.41
PTPN12-210ENST00000464313 DEPDC7Q96QD5 511 aa6.23□□□□□ -1.41
PTPN12-210ENST00000464313 HDAC8Q9BY41 377 aa6.23□□□□□ -1.41
PTPN12-210ENST00000464313 MBD1Q9UIS9 605 aaPredicted RBP6.23□□□□□ -1.41
PTPN12-210ENST00000464313 CDK11AQ9UQ88 783 aaPredicted RBP6.23□□□□□ -1.41
PTPN12-210ENST00000464313 OR14I1A6ND48 311 aa6.22□□□□□ -1.41
PTPN12-210ENST00000464313 PDPK1O15530 556 aa6.22□□□□□ -1.41
PTPN12-210ENST00000464313 EPHB3P54753 998 aa6.22□□□□□ -1.41
PTPN12-210ENST00000464313 ZNF445P59923 1031 aa6.22□□□□□ -1.41
PTPN12-210ENST00000464313 SRSF3P84103 164 aaKnown RBP6.22□□□□□ -1.41
PTPN12-210ENST00000464313 CHRNEQ04844 493 aa6.22□□□□□ -1.41
PTPN12-210ENST00000464313 DUSP4Q13115 394 aa6.22□□□□□ -1.41
PTPN12-210ENST00000464313 SNX17Q15036 470 aa6.22□□□□□ -1.41
PTPN12-210ENST00000464313 VMACQ2NL98 169 aa6.22□□□□□ -1.41
PTPN12-210ENST00000464313 ERICH6BQ5W0A0 696 aa6.22□□□□□ -1.41
PTPN12-210ENST00000464313 ADAT2Q7Z6V5 191 aaKnown RBP6.22□□□□□ -1.41
PTPN12-210ENST00000464313 ANKS4BQ8N8V4 417 aa6.22□□□□□ -1.41
PTPN12-210ENST00000464313 PPP1R14AQ96A00 147 aa6.22□□□□□ -1.41
PTPN12-210ENST00000464313 G6PC3Q9BUM1 346 aa6.22□□□□□ -1.41
PTPN12-210ENST00000464313 NOL6Q9H6R4 1146 aaKnown RBP6.22□□□□□ -1.41
PTPN12-210ENST00000464313 ANKRD34BA5PLL1 514 aa6.21□□□□□ -1.42
PTPN12-210ENST00000464313 SIGLEC6O43699 453 aa6.21□□□□□ -1.42
PTPN12-210ENST00000464313 ITGA4P13612 1032 aa6.21□□□□□ -1.42
PTPN12-210ENST00000464313 TCEAL1Q15170 157 aa6.21□□□□□ -1.42
PTPN12-210ENST00000464313 CLEC16AQ2KHT3 1053 aa6.21□□□□□ -1.42
PTPN12-210ENST00000464313 SLC10A6Q3KNW5 377 aa6.21□□□□□ -1.42
PTPN12-210ENST00000464313 ANKRD39Q53RE8 183 aa6.21□□□□□ -1.42
PTPN12-210ENST00000464313 NOL9Q5SY16 702 aaKnown RBP6.21□□□□□ -1.42
PTPN12-210ENST00000464313 SPATC1Q76KD6 591 aa6.21□□□□□ -1.42
PTPN12-210ENST00000464313 EEPD1Q7L9B9 569 aa6.21□□□□□ -1.42
PTPN12-210ENST00000464313 ZDHHC14Q8IZN3 488 aa6.21□□□□□ -1.42
PTPN12-210ENST00000464313 ZNF513Q8N8E2 541 aaPredicted RBP6.21□□□□□ -1.42
PTPN12-210ENST00000464313 LINC01599Q8WXQ3 324 aa6.21□□□□□ -1.42
PTPN12-210ENST00000464313 DACT3Q96B18 629 aaPredicted RBP6.21□□□□□ -1.42
PTPN12-210ENST00000464313 SIGLEC10Q96LC7 697 aa6.21□□□□□ -1.42
PTPN12-210ENST00000464313 DSCC1Q9BVC3 393 aa6.21□□□□□ -1.42
PTPN12-210ENST00000464313 GBP3Q9H0R5 595 aa6.21□□□□□ -1.42
PTPN12-210ENST00000464313 ASCC2Q9H1I8 757 aaPredicted RBP6.21□□□□□ -1.42
PTPN12-210ENST00000464313 EPB41L4AQ9HCS5 686 aaPredicted RBP6.21□□□□□ -1.42
PTPN12-210ENST00000464313 CHST7Q9NS84 486 aa6.21□□□□□ -1.42
PTPN12-210ENST00000464313 SUGT1Q9Y2Z0 365 aa6.21□□□□□ -1.42
PTPN12-210ENST00000464313 IRAK3Q9Y616 596 aa6.21□□□□□ -1.42
PTPN12-210ENST00000464313 H0Y8X5 98 aa6.2□□□□□ -1.42
PTPN12-210ENST00000464313 TBX1O43435 398 aa6.2□□□□□ -1.42
PTPN12-210ENST00000464313 USP2O75604 605 aaPredicted RBP6.2□□□□□ -1.42
PTPN12-210ENST00000464313 SASH1O94885 1247 aa6.2□□□□□ -1.42
PTPN12-210ENST00000464313 SDHBP21912 280 aa6.2□□□□□ -1.42
PTPN12-210ENST00000464313 CTSKP43235 329 aa6.2□□□□□ -1.42
PTPN12-210ENST00000464313 AFF3P51826 1226 aaKnown RBP6.2□□□□□ -1.42
PTPN12-210ENST00000464313 RASGRF1Q13972 1273 aa6.2□□□□□ -1.42
PTPN12-210ENST00000464313 PPP2R5DQ14738 602 aa6.2□□□□□ -1.42
PTPN12-210ENST00000464313 SV2CQ496J9 727 aa6.2□□□□□ -1.42
PTPN12-210ENST00000464313 CRTC3Q6UUV7 619 aa6.2□□□□□ -1.42
PTPN12-210ENST00000464313 NLRX1Q86UT6 975 aa6.2□□□□□ -1.42
PTPN12-210ENST00000464313 FIBCD1Q8N539 461 aa6.2□□□□□ -1.42
PTPN12-210ENST00000464313 MKL1Q969V6 931 aa6.2□□□□□ -1.42
PTPN12-210ENST00000464313 ZDHHC15Q96MV8 337 aa6.2□□□□□ -1.42
PTPN12-210ENST00000464313 APBA2Q99767 749 aa6.2□□□□□ -1.42
PTPN12-210ENST00000464313 CCDC113Q9H0I3 377 aa6.2□□□□□ -1.42
PTPN12-210ENST00000464313 WHRNQ9P202 907 aa6.2□□□□□ -1.42
PTPN12-210ENST00000464313 PFDN2Q9UHV9 154 aa6.2□□□□□ -1.42
PTPN12-210ENST00000464313 MTERF2Q49AM1 385 aa6.19□□□□□ -1.42
PTPN12-210ENST00000464313 SYT8Q8NBV8 401 aa6.19□□□□□ -1.42
PTPN12-210ENST00000464313 SYTL5Q8TDW5 730 aaPredicted RBP6.19□□□□□ -1.42
PTPN12-210ENST00000464313 TCTN2Q96GX1 697 aa6.19□□□□□ -1.42
PTPN12-210ENST00000464313 CNTD2Q9H8S5 307 aa6.19□□□□□ -1.42
PTPN12-210ENST00000464313 SIRT5Q9NXA8 310 aa6.19□□□□□ -1.42
PTPN12-210ENST00000464313 CGGBP1Q9UFW8 167 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms