RNA–Protein interactions for RNA: ENST00000464138.1

SSR3-203, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-203ENST00000464138 EP400Q96L91 3159 aa8.27□□□□□ -1.09
SSR3-203ENST00000464138 PTCH1Q13635 1447 aa8.27□□□□□ -1.09
SSR3-203ENST00000464138 HMX2A2RU54 273 aa8.26□□□□□ -1.09
SSR3-203ENST00000464138 C9IYK1 514 aa8.26□□□□□ -1.09
SSR3-203ENST00000464138 EOMESO95936 686 aa8.26□□□□□ -1.09
SSR3-203ENST00000464138 TP53P04637 393 aaPredicted RBP8.26□□□□□ -1.09
SSR3-203ENST00000464138 FAM87AP0C7U9 286 aa8.26□□□□□ -1.09
SSR3-203ENST00000464138 KIR3DL1P43629 444 aa8.26□□□□□ -1.09
SSR3-203ENST00000464138 TCEAL1Q15170 157 aa8.26□□□□□ -1.09
SSR3-203ENST00000464138 TDRD10Q5VZ19 366 aaKnown RBP8.26□□□□□ -1.09
SSR3-203ENST00000464138 SDE2Q6IQ49 451 aa8.26□□□□□ -1.09
SSR3-203ENST00000464138 FAM177A1Q8N128 213 aaPredicted RBP8.26□□□□□ -1.09
SSR3-203ENST00000464138 VWCEQ96DN2 955 aa8.26□□□□□ -1.09
SSR3-203ENST00000464138 APBA2Q99767 749 aa8.26□□□□□ -1.09
SSR3-203ENST00000464138 ATRNO75882 1429 aa8.26□□□□□ -1.09
SSR3-203ENST00000464138 LRP5O75197 1615 aa8.25□□□□□ -1.09
SSR3-203ENST00000464138 COL22A1Q8NFW1 1626 aaPredicted RBP8.25□□□□□ -1.09
SSR3-203ENST00000464138 E9PCH4 1651 aa8.25□□□□□ -1.09
SSR3-203ENST00000464138 GSC2O15499 205 aa8.25□□□□□ -1.09
SSR3-203ENST00000464138 AUHQ13825 339 aaKnown RBP8.25□□□□□ -1.09
SSR3-203ENST00000464138 AXDND1Q5T1B0 1012 aaPredicted RBP8.25□□□□□ -1.09
SSR3-203ENST00000464138 SFRP5Q5T4F7 317 aa8.25□□□□□ -1.09
SSR3-203ENST00000464138 RNF43Q68DV7 783 aa8.25□□□□□ -1.09
SSR3-203ENST00000464138 JAZF1Q86VZ6 243 aa8.25□□□□□ -1.09
SSR3-203ENST00000464138 C7orf61Q8IZ16 206 aa8.25□□□□□ -1.09
SSR3-203ENST00000464138 LRRC47Q8N1G4 583 aaKnown RBP8.25□□□□□ -1.09
SSR3-203ENST00000464138 SGSM3Q96HU1 749 aa8.25□□□□□ -1.09
SSR3-203ENST00000464138 KCNH3Q9ULD8 1083 aa8.25□□□□□ -1.09
SSR3-203ENST00000464138 PCDHB12Q9Y5F1 795 aa8.25□□□□□ -1.09
SSR3-203ENST00000464138 MRPL42Q9Y6G3 142 aaKnown RBP8.25□□□□□ -1.09
SSR3-203ENST00000464138 ADGRL3Q9HAR2 1447 aa8.25□□□□□ -1.09
SSR3-203ENST00000464138 MARF1Q9Y4F3 1742 aaKnown RBP8.25□□□□□ -1.09
SSR3-203ENST00000464138 IQGAP3Q86VI3 1631 aa8.25□□□□□ -1.09
SSR3-203ENST00000464138 NRXN3Q9Y4C0 1643 aa8.25□□□□□ -1.09
SSR3-203ENST00000464138 ANKRD50Q9ULJ7 1429 aa8.24□□□□□ -1.09
SSR3-203ENST00000464138 IGF2BP3O00425 579 aaKnown RBP eCLIP8.24□□□□□ -1.09
SSR3-203ENST00000464138 CLSTN1O94985 981 aa8.24□□□□□ -1.09
SSR3-203ENST00000464138 GDF11O95390 407 aa8.24□□□□□ -1.09
SSR3-203ENST00000464138 EPHX1P07099 455 aa8.24□□□□□ -1.09
SSR3-203ENST00000464138 SSRP1Q08945 709 aaKnown RBP8.24□□□□□ -1.09
SSR3-203ENST00000464138 SLC10A6Q3KNW5 377 aa8.24□□□□□ -1.09
SSR3-203ENST00000464138 DUSP27Q5VZP5 1158 aa8.24□□□□□ -1.09
SSR3-203ENST00000464138 C22orf34Q6ZV56 151 aa8.24□□□□□ -1.09
SSR3-203ENST00000464138 TMEM151AQ8N4L1 468 aa8.24□□□□□ -1.09
SSR3-203ENST00000464138 THAP3Q8WTV1 239 aaPredicted RBP8.24□□□□□ -1.09
SSR3-203ENST00000464138 GATA6Q92908 595 aa8.24□□□□□ -1.09
SSR3-203ENST00000464138 ZNF512BQ96KM6 892 aaPredicted RBP8.24□□□□□ -1.09
SSR3-203ENST00000464138 KLHL25Q9H0H3 589 aa8.24□□□□□ -1.09
SSR3-203ENST00000464138 FAM86C1Q9NVL1 165 aa8.24□□□□□ -1.09
SSR3-203ENST00000464138 PRR13Q9NZ81 148 aa8.24□□□□□ -1.09
SSR3-203ENST00000464138 WHRNQ9P202 907 aa8.24□□□□□ -1.09
SSR3-203ENST00000464138 ZMYM5Q9UJ78 669 aa8.24□□□□□ -1.09
SSR3-203ENST00000464138 NALCNQ8IZF0 1738 aa8.23□□□□□ -1.09
SSR3-203ENST00000464138 LEFTY1O75610 366 aa8.23□□□□□ -1.09
SSR3-203ENST00000464138 PPM1BO75688 479 aa8.23□□□□□ -1.09
SSR3-203ENST00000464138 H2AFB1P0C5Y9 115 aa8.23□□□□□ -1.09
SSR3-203ENST00000464138 H2AFB2P0C5Z0 115 aa8.23□□□□□ -1.09
SSR3-203ENST00000464138 CPSF6Q16630 551 aaKnown RBP eCLIP8.23□□□□□ -1.09
SSR3-203ENST00000464138 LONRF2Q1L5Z9 754 aa8.23□□□□□ -1.09
SSR3-203ENST00000464138 NBPF9Q3BBW0 867 aa8.23□□□□□ -1.09
SSR3-203ENST00000464138 PLA2G4EQ3MJ16 856 aa8.23□□□□□ -1.09
SSR3-203ENST00000464138 SV2CQ496J9 727 aa8.23□□□□□ -1.09
SSR3-203ENST00000464138 C2orf27AQ580R0 203 aa8.23□□□□□ -1.09
SSR3-203ENST00000464138 ZC3H12BQ5HYM0 836 aaKnown RBP8.23□□□□□ -1.09
SSR3-203ENST00000464138 SLC51AQ86UW1 340 aa8.23□□□□□ -1.09
SSR3-203ENST00000464138 RNPC3Q96LT9 517 aaKnown RBP8.23□□□□□ -1.09
SSR3-203ENST00000464138 METTL22Q9BUU2 404 aaPredicted RBP8.23□□□□□ -1.09
SSR3-203ENST00000464138 CWC22Q9HCG8 908 aaKnown RBP8.23□□□□□ -1.09
SSR3-203ENST00000464138 C1orf167Q5SNV9 1468 aa8.23□□□□□ -1.09
SSR3-203ENST00000464138 SPHKAPQ2M3C7 1700 aa8.23□□□□□ -1.09
SSR3-203ENST00000464138 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.23□□□□□ -1.09
SSR3-203ENST00000464138 BLMP54132 1417 aaPredicted RBP8.22□□□□□ -1.09
SSR3-203ENST00000464138 BCL9LQ86UU0 1499 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 A0A087WZG4 1122 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 ENPP3O14638 875 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 CBFA2T2O43439 604 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 ITGA4P13612 1032 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 CD247P20963 164 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 GSK3AP49840 483 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 NFIAQ12857 509 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 DCAF15Q66K64 600 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 SPATC1Q76KD6 591 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 ADAT2Q7Z6V5 191 aaKnown RBP8.22□□□□□ -1.09
SSR3-203ENST00000464138 LILRB2Q8N423 598 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 CRACR2BQ8N4Y2 399 aaPredicted RBP8.22□□□□□ -1.09
SSR3-203ENST00000464138 JMYQ8N9B5 988 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 SH3TC2Q8TF17 1288 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 DDX17Q92841 729 aaKnown RBP8.22□□□□□ -1.09
SSR3-203ENST00000464138 DBNDD2Q9BQY9 259 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 SPATA9Q9BWV2 254 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 TPSG1Q9NRR2 321 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 SUSD2Q9UGT4 822 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 PFDN2Q9UHV9 154 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 FBXL21Q9UKT6 434 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 KDM2BQ8NHM5 1336 aa8.22□□□□□ -1.09
SSR3-203ENST00000464138 GNAT3A8MTJ3 354 aa8.21□□□□□ -1.1
SSR3-203ENST00000464138 HSD3B2P26439 372 aa8.21□□□□□ -1.1
SSR3-203ENST00000464138 ADMP35318 185 aa8.21□□□□□ -1.1
SSR3-203ENST00000464138 NOL9Q5SY16 702 aaKnown RBP8.21□□□□□ -1.1
SSR3-203ENST00000464138 FAM214BQ7L5A3 538 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms