RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 TTBK2Q6IQ55 1244 aa16.91■□□□□ 0.3
SNRNP40-203ENST00000463988 TBC1D10CQ8IV04 446 aa16.91■□□□□ 0.3
SNRNP40-203ENST00000463988 ESR2Q92731 530 aa16.91■□□□□ 0.3
SNRNP40-203ENST00000463988 GLT1D1Q96MS3 346 aa16.91■□□□□ 0.3
SNRNP40-203ENST00000463988 DIAPH3Q9NSV4 1193 aa16.91■□□□□ 0.3
SNRNP40-203ENST00000463988 MTMR7Q9Y216 660 aa16.91■□□□□ 0.3
SNRNP40-203ENST00000463988 LOC102724159A0A0B4J2E5 919 aa16.9■□□□□ 0.3
SNRNP40-203ENST00000463988 MYADML2A6NDP7 307 aa16.9■□□□□ 0.3
SNRNP40-203ENST00000463988 DCDC2CA8MYV0 355 aa16.9■□□□□ 0.3
SNRNP40-203ENST00000463988 ZNF213O14771 459 aa16.9■□□□□ 0.3
SNRNP40-203ENST00000463988 PQBP1O60828 265 aaKnown RBP16.9■□□□□ 0.3
SNRNP40-203ENST00000463988 SNHG28P0DPA3 235 aa16.9■□□□□ 0.3
SNRNP40-203ENST00000463988 PDHBP11177 359 aa16.9■□□□□ 0.3
SNRNP40-203ENST00000463988 SLC16A2P36021 539 aa16.9■□□□□ 0.3
SNRNP40-203ENST00000463988 TNFAIP2Q03169 654 aa16.9■□□□□ 0.3
SNRNP40-203ENST00000463988 PWP2Q15269 919 aaKnown RBP16.9■□□□□ 0.3
SNRNP40-203ENST00000463988 CCDC178Q5BJE1 867 aa16.9■□□□□ 0.3
SNRNP40-203ENST00000463988 MORC4Q8TE76 937 aa16.9■□□□□ 0.3
SNRNP40-203ENST00000463988 MTMR10Q9NXD2 777 aa16.9■□□□□ 0.3
SNRNP40-203ENST00000463988 MROH7Q68CQ1 1323 aa16.9■□□□□ 0.3
SNRNP40-203ENST00000463988 ASGR1P07306 291 aa16.89■□□□□ 0.29
SNRNP40-203ENST00000463988 CDK7P50613 346 aa16.89■□□□□ 0.29
SNRNP40-203ENST00000463988 ZNF543Q08ER8 600 aa16.89■□□□□ 0.29
SNRNP40-203ENST00000463988 SHHQ15465 462 aa16.89■□□□□ 0.29
SNRNP40-203ENST00000463988 GNASQ5JWF2 1037 aa16.89■□□□□ 0.29
SNRNP40-203ENST00000463988 CWC27Q6UX04 472 aaKnown RBP16.89■□□□□ 0.29
SNRNP40-203ENST00000463988 Q7L0L9 218 aa16.89■□□□□ 0.29
SNRNP40-203ENST00000463988 DGKHQ86XP1 1220 aa16.89■□□□□ 0.29
SNRNP40-203ENST00000463988 DSCC1Q9BVC3 393 aa16.89■□□□□ 0.29
SNRNP40-203ENST00000463988 TMEM39AQ9NV64 488 aa16.89■□□□□ 0.29
SNRNP40-203ENST00000463988 ASTN1O14525 1302 aa16.89■□□□□ 0.29
SNRNP40-203ENST00000463988 CTAGE5O15320 804 aa16.88■□□□□ 0.29
SNRNP40-203ENST00000463988 RAG1P15918 1043 aa16.88■□□□□ 0.29
SNRNP40-203ENST00000463988 ITGB8P26012 769 aa16.88■□□□□ 0.29
SNRNP40-203ENST00000463988 FAAP100Q0VG06 881 aa16.88■□□□□ 0.29
SNRNP40-203ENST00000463988 IQSEC1Q6DN90 963 aa16.88■□□□□ 0.29
SNRNP40-203ENST00000463988 NSMFQ6X4W1 530 aa16.88■□□□□ 0.29
SNRNP40-203ENST00000463988 VTA1Q9NP79 307 aa16.88■□□□□ 0.29
SNRNP40-203ENST00000463988 GPCPD1Q9NPB8 672 aa16.88■□□□□ 0.29
SNRNP40-203ENST00000463988 ADD3Q9UEY8 706 aaKnown RBP16.88■□□□□ 0.29
SNRNP40-203ENST00000463988 GNEQ9Y223 722 aaKnown RBP16.88■□□□□ 0.29
SNRNP40-203ENST00000463988 STXBP5LQ9Y2K9 1186 aa16.88■□□□□ 0.29
SNRNP40-203ENST00000463988 Q9Y3F1 56 aa16.88■□□□□ 0.29
SNRNP40-203ENST00000463988 NEDD4P46934 1319 aa16.88■□□□□ 0.29
SNRNP40-203ENST00000463988 FRMPD2Q68DX3 1309 aaPredicted RBP16.88■□□□□ 0.29
SNRNP40-203ENST00000463988 A0A0U1RQG5 324 aaPredicted RBP16.87■□□□□ 0.29
SNRNP40-203ENST00000463988 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.87■□□□□ 0.29
SNRNP40-203ENST00000463988 CABYRO75952 493 aa16.87■□□□□ 0.29
SNRNP40-203ENST00000463988 BAATQ14032 418 aaPredicted RBP16.87■□□□□ 0.29
SNRNP40-203ENST00000463988 C9orf50Q5SZB4 431 aa16.87■□□□□ 0.29
SNRNP40-203ENST00000463988 GPATCH4Q5T3I0 446 aaKnown RBP16.87■□□□□ 0.29
SNRNP40-203ENST00000463988 IQCA1Q86XH1 822 aa16.87■□□□□ 0.29
SNRNP40-203ENST00000463988 ANKS1AQ92625 1134 aa16.87■□□□□ 0.29
SNRNP40-203ENST00000463988 SEZ6LQ9BYH1 1024 aa16.87■□□□□ 0.29
SNRNP40-203ENST00000463988 CTNNA3Q9UI47 895 aa16.87■□□□□ 0.29
SNRNP40-203ENST00000463988 WDR19Q8NEZ3 1342 aa16.87■□□□□ 0.29
SNRNP40-203ENST00000463988 ARVCFO00192 962 aa16.86■□□□□ 0.29
SNRNP40-203ENST00000463988 IRX5P78411 483 aaPredicted RBP16.86■□□□□ 0.29
SNRNP40-203ENST00000463988 TAPT1Q6NXT6 567 aa16.86■□□□□ 0.29
SNRNP40-203ENST00000463988 NOL8Q76FK4 1167 aaKnown RBP16.86■□□□□ 0.29
SNRNP40-203ENST00000463988 TLK2Q86UE8 772 aa16.86■□□□□ 0.29
SNRNP40-203ENST00000463988 CLEC4DQ8WXI8 215 aa16.86■□□□□ 0.29
SNRNP40-203ENST00000463988 VTI1AQ96AJ9 217 aa16.86■□□□□ 0.29
SNRNP40-203ENST00000463988 MAF1Q9H063 256 aa16.86■□□□□ 0.29
SNRNP40-203ENST00000463988 AP5M1Q9H0R1 490 aa16.86■□□□□ 0.29
SNRNP40-203ENST00000463988 TBX21Q9UL17 535 aa16.86■□□□□ 0.29
SNRNP40-203ENST00000463988 LAMA2P24043 3122 aaKnown RBP16.86■□□□□ 0.29
SNRNP40-203ENST00000463988 COL6A3P12111 3177 aa16.85■□□□□ 0.29
SNRNP40-203ENST00000463988 NFIBO00712 420 aa16.85■□□□□ 0.29
SNRNP40-203ENST00000463988 ZEB2O60315 1214 aa16.85■□□□□ 0.29
SNRNP40-203ENST00000463988 KDM4AO75164 1064 aa16.85■□□□□ 0.29
SNRNP40-203ENST00000463988 TIMP1P01033 207 aa16.85■□□□□ 0.29
SNRNP40-203ENST00000463988 SMPD1P17405 629 aa16.85■□□□□ 0.29
SNRNP40-203ENST00000463988 SMAD3P84022 425 aaKnown RBP16.85■□□□□ 0.29
SNRNP40-203ENST00000463988 FPGSQ05932 587 aa16.85■□□□□ 0.29
SNRNP40-203ENST00000463988 FSCN1Q16658 493 aaKnown RBP16.85■□□□□ 0.29
SNRNP40-203ENST00000463988 IMMTQ16891 758 aaKnown RBP16.85■□□□□ 0.29
SNRNP40-203ENST00000463988 LAMA4Q16363 1823 aa16.84■□□□□ 0.29
SNRNP40-203ENST00000463988 PTPDC1A2A3K4 754 aa16.84■□□□□ 0.29
SNRNP40-203ENST00000463988 ALDH5A1P51649 535 aaPredicted RBP16.84■□□□□ 0.29
SNRNP40-203ENST00000463988 BEX3Q00994 111 aa16.84■□□□□ 0.29
SNRNP40-203ENST00000463988 FBXO16Q8IX29 292 aaPredicted RBP16.84■□□□□ 0.29
SNRNP40-203ENST00000463988 SLC43A3Q8NBI5 491 aa16.84■□□□□ 0.29
SNRNP40-203ENST00000463988 PNMA1Q8ND90 353 aa16.84■□□□□ 0.29
SNRNP40-203ENST00000463988 RGS22Q8NE09 1264 aa16.84■□□□□ 0.29
SNRNP40-203ENST00000463988 ZSCAN10Q96SZ4 725 aaPredicted RBP16.84■□□□□ 0.29
SNRNP40-203ENST00000463988 ZKSCAN3Q9BRR0 538 aa16.84■□□□□ 0.29
SNRNP40-203ENST00000463988 KRT23Q9C075 422 aa16.84■□□□□ 0.29
SNRNP40-203ENST00000463988 CNNM2Q9H8M5 875 aa16.84■□□□□ 0.29
SNRNP40-203ENST00000463988 PDGFCQ9NRA1 345 aa16.84■□□□□ 0.29
SNRNP40-203ENST00000463988 SUPT16HQ9Y5B9 1047 aaKnown RBP16.84■□□□□ 0.29
SNRNP40-203ENST00000463988 LRRC37A2A6NM11 1700 aa16.84■□□□□ 0.29
SNRNP40-203ENST00000463988 LCTP09848 1927 aa16.84■□□□□ 0.29
SNRNP40-203ENST00000463988 RBM47A0AV96 593 aaKnown RBP16.83■□□□□ 0.28
SNRNP40-203ENST00000463988 TLR3O15455 904 aaKnown RBP16.83■□□□□ 0.28
SNRNP40-203ENST00000463988 DYNC1LI2O43237 492 aaPredicted RBP16.83■□□□□ 0.28
SNRNP40-203ENST00000463988 EPHB4P54760 987 aa16.83■□□□□ 0.28
SNRNP40-203ENST00000463988 DUSP28Q4G0W2 176 aa16.83■□□□□ 0.28
SNRNP40-203ENST00000463988 MFSD5Q6N075 450 aa16.83■□□□□ 0.28
SNRNP40-203ENST00000463988 RNF207Q6ZRF8 634 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms