RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 STARD7Q9NQZ5 370 aa22.17■■□□□ 1.14
SF3A1-205ENST00000463818 DDX49Q9Y6V7 483 aaKnown RBP22.17■■□□□ 1.14
SF3A1-205ENST00000463818 PQBP1O60828 265 aaKnown RBP22.16■■□□□ 1.14
SF3A1-205ENST00000463818 SNHG28P0DPA3 235 aa22.16■■□□□ 1.14
SF3A1-205ENST00000463818 PDE4AP27815 886 aa22.16■■□□□ 1.14
SF3A1-205ENST00000463818 GNASQ5JWF2 1037 aa22.16■■□□□ 1.14
SF3A1-205ENST00000463818 DGKHQ86XP1 1220 aa22.16■■□□□ 1.14
SF3A1-205ENST00000463818 PCSK9Q8NBP7 692 aaKnown RBP22.16■■□□□ 1.14
SF3A1-205ENST00000463818 PURBQ96QR8 312 aaKnown RBP22.16■■□□□ 1.14
SF3A1-205ENST00000463818 DSCC1Q9BVC3 393 aa22.16■■□□□ 1.14
SF3A1-205ENST00000463818 UPF3AQ9H1J1 476 aaKnown RBP22.16■■□□□ 1.14
SF3A1-205ENST00000463818 ASTN1O14525 1302 aa22.15■■□□□ 1.14
SF3A1-205ENST00000463818 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.15■■□□□ 1.14
SF3A1-205ENST00000463818 KDM4AO75164 1064 aa22.15■■□□□ 1.14
SF3A1-205ENST00000463818 CLTBP09497 229 aa22.15■■□□□ 1.14
SF3A1-205ENST00000463818 CST5P28325 142 aaPredicted RBP22.15■■□□□ 1.14
SF3A1-205ENST00000463818 TNFAIP2Q03169 654 aa22.15■■□□□ 1.14
SF3A1-205ENST00000463818 BAATQ14032 418 aaPredicted RBP22.15■■□□□ 1.14
SF3A1-205ENST00000463818 CCDC178Q5BJE1 867 aa22.15■■□□□ 1.14
SF3A1-205ENST00000463818 NOL8Q76FK4 1167 aaKnown RBP22.15■■□□□ 1.14
SF3A1-205ENST00000463818 VTI1AQ96AJ9 217 aa22.15■■□□□ 1.14
SF3A1-205ENST00000463818 CTNNA3Q9UI47 895 aa22.15■■□□□ 1.14
SF3A1-205ENST00000463818 DNAH12Q6ZR08 3092 aa22.15■■□□□ 1.14
SF3A1-205ENST00000463818 ASGR1P07306 291 aa22.14■■□□□ 1.13
SF3A1-205ENST00000463818 NT5C2P49902 561 aa22.14■■□□□ 1.13
SF3A1-205ENST00000463818 IRX6P78412 446 aaPredicted RBP22.14■■□□□ 1.13
SF3A1-205ENST00000463818 Q7L0L9 218 aa22.14■■□□□ 1.13
SF3A1-205ENST00000463818 IQCA1Q86XH1 822 aa22.14■■□□□ 1.13
SF3A1-205ENST00000463818 DEFB123Q8N688 67 aa22.14■■□□□ 1.13
SF3A1-205ENST00000463818 GLT1D1Q96MS3 346 aa22.14■■□□□ 1.13
SF3A1-205ENST00000463818 TOX2Q96NM4 488 aa22.14■■□□□ 1.13
SF3A1-205ENST00000463818 ELP1O95163 1332 aa22.13■■□□□ 1.13
SF3A1-205ENST00000463818 DCDC2CA8MYV0 355 aa22.13■■□□□ 1.13
SF3A1-205ENST00000463818 B4E1Z4 1266 aa22.13■■□□□ 1.13
SF3A1-205ENST00000463818 NFIBO00712 420 aa22.13■■□□□ 1.13
SF3A1-205ENST00000463818 CTAGE5O15320 804 aa22.13■■□□□ 1.13
SF3A1-205ENST00000463818 GOLGA8HP0CJ92 632 aa22.13■■□□□ 1.13
SF3A1-205ENST00000463818 ITGB8P26012 769 aa22.13■■□□□ 1.13
SF3A1-205ENST00000463818 SHHQ15465 462 aa22.13■■□□□ 1.13
SF3A1-205ENST00000463818 IMMTQ16891 758 aaKnown RBP22.13■■□□□ 1.13
SF3A1-205ENST00000463818 EEPD1Q7L9B9 569 aa22.13■■□□□ 1.13
SF3A1-205ENST00000463818 ANKRD33Q7Z3H0 272 aa22.13■■□□□ 1.13
SF3A1-205ENST00000463818 PDGFCQ9NRA1 345 aa22.13■■□□□ 1.13
SF3A1-205ENST00000463818 TMEM39AQ9NV64 488 aa22.13■■□□□ 1.13
SF3A1-205ENST00000463818 ZSWIM5Q9P217 1185 aa22.13■■□□□ 1.13
SF3A1-205ENST00000463818 LAMA3Q16787 3333 aa22.13■■□□□ 1.13
SF3A1-205ENST00000463818 KIAA0355O15063 1070 aa22.12■■□□□ 1.13
SF3A1-205ENST00000463818 NKX3-2P78367 333 aa22.12■■□□□ 1.13
SF3A1-205ENST00000463818 BEX3Q00994 111 aa22.12■■□□□ 1.13
SF3A1-205ENST00000463818 FAAP100Q0VG06 881 aa22.12■■□□□ 1.13
SF3A1-205ENST00000463818 C9orf50Q5SZB4 431 aa22.12■■□□□ 1.13
SF3A1-205ENST00000463818 TTC22Q5TAA0 569 aa22.12■■□□□ 1.13
SF3A1-205ENST00000463818 IQSEC1Q6DN90 963 aa22.12■■□□□ 1.13
SF3A1-205ENST00000463818 TAPT1Q6NXT6 567 aa22.12■■□□□ 1.13
SF3A1-205ENST00000463818 CLEC4DQ8WXI8 215 aa22.12■■□□□ 1.13
SF3A1-205ENST00000463818 ANKS1AQ92625 1134 aa22.12■■□□□ 1.13
SF3A1-205ENST00000463818 ZSCAN10Q96SZ4 725 aaPredicted RBP22.12■■□□□ 1.13
SF3A1-205ENST00000463818 UBA5Q9GZZ9 404 aa22.12■■□□□ 1.13
SF3A1-205ENST00000463818 IL25Q9H293 177 aa22.12■■□□□ 1.13
SF3A1-205ENST00000463818 PNMA2Q9UL42 364 aa22.12■■□□□ 1.13
SF3A1-205ENST00000463818 GNEQ9Y223 722 aaKnown RBP22.12■■□□□ 1.13
SF3A1-205ENST00000463818 PTPDC1A2A3K4 754 aa22.11■■□□□ 1.13
SF3A1-205ENST00000463818 DYNC1LI2O43237 492 aaPredicted RBP22.11■■□□□ 1.13
SF3A1-205ENST00000463818 GSPT1P15170 499 aaKnown RBP22.11■■□□□ 1.13
SF3A1-205ENST00000463818 RAG1P15918 1043 aa22.11■■□□□ 1.13
SF3A1-205ENST00000463818 SMPD1P17405 629 aa22.11■■□□□ 1.13
SF3A1-205ENST00000463818 CDK7P50613 346 aa22.11■■□□□ 1.13
SF3A1-205ENST00000463818 GPATCH4Q5T3I0 446 aaKnown RBP22.11■■□□□ 1.13
SF3A1-205ENST00000463818 FBXO16Q8IX29 292 aaPredicted RBP22.11■■□□□ 1.13
SF3A1-205ENST00000463818 PNMA1Q8ND90 353 aa22.11■■□□□ 1.13
SF3A1-205ENST00000463818 MORC4Q8TE76 937 aa22.11■■□□□ 1.13
SF3A1-205ENST00000463818 KAT14Q9H8E8 782 aa22.11■■□□□ 1.13
SF3A1-205ENST00000463818 ADD3Q9UEY8 706 aaKnown RBP22.11■■□□□ 1.13
SF3A1-205ENST00000463818 KRT23Q9C075 422 aa22.1■■□□□ 1.13
SF3A1-205ENST00000463818 AP5M1Q9H0R1 490 aa22.1■■□□□ 1.13
SF3A1-205ENST00000463818 CPVLQ9H3G5 476 aa22.1■■□□□ 1.13
SF3A1-205ENST00000463818 VTA1Q9NP79 307 aa22.1■■□□□ 1.13
SF3A1-205ENST00000463818 A0A0U1RQG5 324 aaPredicted RBP22.09■■□□□ 1.13
SF3A1-205ENST00000463818 ARVCFO00192 962 aa22.09■■□□□ 1.13
SF3A1-205ENST00000463818 PTGS1P23219 599 aa22.09■■□□□ 1.13
SF3A1-205ENST00000463818 CALML3P27482 149 aa22.09■■□□□ 1.13
SF3A1-205ENST00000463818 ALDH5A1P51649 535 aaPredicted RBP22.09■■□□□ 1.13
SF3A1-205ENST00000463818 TMEM63BQ5T3F8 832 aa22.09■■□□□ 1.13
SF3A1-205ENST00000463818 KIAA1211Q6ZU35 1233 aa22.09■■□□□ 1.13
SF3A1-205ENST00000463818 ENAHQ8N8S7 591 aaPredicted RBP22.09■■□□□ 1.13
SF3A1-205ENST00000463818 MTMR10Q9NXD2 777 aa22.09■■□□□ 1.13
SF3A1-205ENST00000463818 WDR19Q8NEZ3 1342 aa22.08■■□□□ 1.13
SF3A1-205ENST00000463818 SLC30A10Q6XR72 485 aa22.08■■□□□ 1.13
SF3A1-205ENST00000463818 RNF207Q6ZRF8 634 aa22.08■■□□□ 1.13
SF3A1-205ENST00000463818 TLK2Q86UE8 772 aa22.08■■□□□ 1.13
SF3A1-205ENST00000463818 CNNM2Q9H8M5 875 aa22.08■■□□□ 1.13
SF3A1-205ENST00000463818 Q9Y3F1 56 aa22.08■■□□□ 1.13
SF3A1-205ENST00000463818 LOC102724159A0A0B4J2E5 919 aa22.07■■□□□ 1.12
SF3A1-205ENST00000463818 EPHB4P54760 987 aa22.07■■□□□ 1.12
SF3A1-205ENST00000463818 RPS6P62753 249 aaKnown RBP22.07■■□□□ 1.12
SF3A1-205ENST00000463818 PWP2Q15269 919 aaKnown RBP22.07■■□□□ 1.12
SF3A1-205ENST00000463818 FSCN1Q16658 493 aaKnown RBP22.07■■□□□ 1.12
SF3A1-205ENST00000463818 CXCL17Q6UXB2 119 aa22.07■■□□□ 1.12
SF3A1-205ENST00000463818 TNKSO95271 1327 aa22.06■■□□□ 1.12
SF3A1-205ENST00000463818 MROH7Q68CQ1 1323 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms