RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 C12orf42Q96LP6 360 aa21.66■■□□□ 1.06
CCDC78-206ENST00000463539 AFG3L2Q9Y4W6 797 aa21.66■■□□□ 1.06
CCDC78-206ENST00000463539 MRVI1Q9Y6F6 885 aa21.66■■□□□ 1.06
CCDC78-206ENST00000463539 POLR2AP24928 1970 aaKnown RBP21.66■■□□□ 1.06
CCDC78-206ENST00000463539 KINO60870 393 aaKnown RBP21.66■■□□□ 1.06
CCDC78-206ENST00000463539 FLOT1O75955 427 aa21.66■■□□□ 1.06
CCDC78-206ENST00000463539 NDUFA8P51970 172 aa21.66■■□□□ 1.06
CCDC78-206ENST00000463539 SNW1Q13573 536 aaKnown RBP21.66■■□□□ 1.06
CCDC78-206ENST00000463539 TTLL12Q14166 644 aaPredicted RBP21.66■■□□□ 1.06
CCDC78-206ENST00000463539 RESP18Q5W5W9 173 aa21.66■■□□□ 1.06
CCDC78-206ENST00000463539 FERMT2Q96AC1 680 aa21.66■■□□□ 1.06
CCDC78-206ENST00000463539 CLSTN2Q9H4D0 955 aa21.66■■□□□ 1.06
CCDC78-206ENST00000463539 PFKFB1P16118 471 aa21.65■■□□□ 1.06
CCDC78-206ENST00000463539 LETM2Q2VYF4 491 aa21.65■■□□□ 1.06
CCDC78-206ENST00000463539 FMR1NBQ8N0W7 255 aaPredicted RBP21.65■■□□□ 1.06
CCDC78-206ENST00000463539 ZNF579Q8NAF0 562 aaKnown RBP21.65■■□□□ 1.06
CCDC78-206ENST00000463539 TMOD4Q9NZQ9 345 aa21.65■■□□□ 1.06
CCDC78-206ENST00000463539 USP17L15C9J2P7 530 aa21.64■■□□□ 1.06
CCDC78-206ENST00000463539 USP17L13C9JLJ4 530 aa21.64■■□□□ 1.06
CCDC78-206ENST00000463539 USP17L11C9JVI0 530 aa21.64■■□□□ 1.06
CCDC78-206ENST00000463539 USP17L18D6R9N7 530 aa21.64■■□□□ 1.06
CCDC78-206ENST00000463539 USP17L22D6RA61 530 aa21.64■■□□□ 1.06
CCDC78-206ENST00000463539 USP17L17D6RBQ6 530 aa21.64■■□□□ 1.06
CCDC78-206ENST00000463539 USP17L19D6RCP7 530 aa21.64■■□□□ 1.06
CCDC78-206ENST00000463539 USP17L20D6RJB6 530 aa21.64■■□□□ 1.06
CCDC78-206ENST00000463539 TAL1P17542 331 aaPredicted RBP21.64■■□□□ 1.06
CCDC78-206ENST00000463539 USP17L24Q0WX57 530 aa21.64■■□□□ 1.06
CCDC78-206ENST00000463539 CAMK4Q16566 473 aa21.64■■□□□ 1.06
CCDC78-206ENST00000463539 USP17L6PQ6QN14 398 aa21.64■■□□□ 1.06
CCDC78-206ENST00000463539 ANKRD13AQ8IZ07 590 aa21.64■■□□□ 1.06
CCDC78-206ENST00000463539 RBM46Q8TBY0 533 aaKnown RBP21.64■■□□□ 1.06
CCDC78-206ENST00000463539 TNMDQ9H2S6 317 aa21.64■■□□□ 1.06
CCDC78-206ENST00000463539 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.64■■□□□ 1.06
CCDC78-206ENST00000463539 PPP1R9AQ9ULJ8 1098 aa21.64■■□□□ 1.06
CCDC78-206ENST00000463539 CCNT1O60563 726 aaKnown RBP21.64■■□□□ 1.05
CCDC78-206ENST00000463539 POTEIP0CG38 1075 aa21.64■■□□□ 1.05
CCDC78-206ENST00000463539 POTEJP0CG39 1038 aa21.64■■□□□ 1.05
CCDC78-206ENST00000463539 GRIN1Q05586 938 aa21.64■■□□□ 1.05
CCDC78-206ENST00000463539 GOLGA6L3A6NEY3 463 aa21.63■■□□□ 1.05
CCDC78-206ENST00000463539 AP3B2Q13367 1082 aa21.63■■□□□ 1.05
CCDC78-206ENST00000463539 MCTP2Q6DN12 878 aa21.63■■□□□ 1.05
CCDC78-206ENST00000463539 LRSAM1Q6UWE0 723 aa21.63■■□□□ 1.05
CCDC78-206ENST00000463539 FAM237AA0A1B0GTK4 181 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 MEIS2O14770 477 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 ICAM1P05362 532 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 ORC2Q13416 577 aaPredicted RBP21.62■■□□□ 1.05
CCDC78-206ENST00000463539 MAP3K11Q16584 847 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 MAP1SQ66K74 1059 aaPredicted RBP21.62■■□□□ 1.05
CCDC78-206ENST00000463539 ARL6IP4Q66PJ3 421 aaKnown RBP21.62■■□□□ 1.05
CCDC78-206ENST00000463539 MOB2Q70IA6 237 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 TEX2Q8IWB9 1127 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 CSRNP2Q9H175 543 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 ELP3Q9H9T3 547 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 FAM13BQ9NYF5 915 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 HPSEQ9Y251 543 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 MRPL11Q9Y3B7 192 aaKnown RBP21.62■■□□□ 1.05
CCDC78-206ENST00000463539 ABCB11O95342 1321 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 PAPPA2Q9BXP8 1791 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 DCAF8L1A6NGE4 600 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 LAD1O00515 517 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 OPLAHO14841 1288 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 SPECC1Q5M775 1068 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 ARMC9Q7Z3E5 817 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 LDHDQ86WU2 507 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 C4orf32Q8N8J7 132 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 SLC38A10Q9HBR0 1119 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 CCPG1Q9ULG6 757 aa21.62■■□□□ 1.05
CCDC78-206ENST00000463539 VWA3AA6NCI4 1184 aa21.61■■□□□ 1.05
CCDC78-206ENST00000463539 NEMFO60524 1076 aa21.61■■□□□ 1.05
CCDC78-206ENST00000463539 SYKP43405 635 aa21.61■■□□□ 1.05
CCDC78-206ENST00000463539 SH3D19Q5HYK7 790 aa21.61■■□□□ 1.05
CCDC78-206ENST00000463539 GAS2L3Q86XJ1 694 aa21.61■■□□□ 1.05
CCDC78-206ENST00000463539 CNKSR2Q8WXI2 1034 aa21.61■■□□□ 1.05
CCDC78-206ENST00000463539 CLMNQ96JQ2 1002 aa21.61■■□□□ 1.05
CCDC78-206ENST00000463539 RRAGCQ9HB90 399 aa21.61■■□□□ 1.05
CCDC78-206ENST00000463539 CTDP1Q9Y5B0 961 aaPredicted RBP21.61■■□□□ 1.05
CCDC78-206ENST00000463539 FSD2A1L4K1 749 aa21.6■■□□□ 1.05
CCDC78-206ENST00000463539 SPDYE3A6NKU9 549 aa21.6■■□□□ 1.05
CCDC78-206ENST00000463539 PIK3CDO00329 1044 aa21.6■■□□□ 1.05
CCDC78-206ENST00000463539 FDX1P10109 184 aa21.6■■□□□ 1.05
CCDC78-206ENST00000463539 PPATQ06203 517 aa21.6■■□□□ 1.05
CCDC78-206ENST00000463539 ERO1BQ86YB8 467 aa21.6■■□□□ 1.05
CCDC78-206ENST00000463539 ANO3Q9BYT9 981 aa21.6■■□□□ 1.05
CCDC78-206ENST00000463539 KCNH3Q9ULD8 1083 aa21.6■■□□□ 1.05
CCDC78-206ENST00000463539 ZNF536O15090 1300 aa21.6■■□□□ 1.05
CCDC78-206ENST00000463539 CTAGE5O15320 804 aa21.59■■□□□ 1.05
CCDC78-206ENST00000463539 ZBED4O75132 1171 aa21.59■■□□□ 1.05
CCDC78-206ENST00000463539 ZNF202O95125 648 aa21.59■■□□□ 1.05
CCDC78-206ENST00000463539 FOSP01100 380 aaPredicted RBP21.59■■□□□ 1.05
CCDC78-206ENST00000463539 OTUD5Q96G74 571 aa21.59■■□□□ 1.05
CCDC78-206ENST00000463539 AGBL1Q96MI9 1066 aa21.59■■□□□ 1.05
CCDC78-206ENST00000463539 OTOFQ9HC10 1997 aa21.59■■□□□ 1.05
CCDC78-206ENST00000463539 PHIPQ8WWQ0 1821 aa21.59■■□□□ 1.05
CCDC78-206ENST00000463539 SPDYE5A6NIY4 337 aa21.59■■□□□ 1.05
CCDC78-206ENST00000463539 TMEM60Q9H2L4 133 aa21.59■■□□□ 1.05
CCDC78-206ENST00000463539 PNMA2Q9UL42 364 aa21.59■■□□□ 1.05
CCDC78-206ENST00000463539 TRAF5O00463 557 aa21.58■■□□□ 1.05
CCDC78-206ENST00000463539 VWA5AO00534 786 aa21.58■■□□□ 1.05
CCDC78-206ENST00000463539 OR52Z1P0C646 297 aa21.58■■□□□ 1.05
CCDC78-206ENST00000463539 HOXA13P31271 388 aaPredicted RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms