RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 SEZ6LQ9BYH1 1024 aa23.43■■□□□ 1.34
VARS-221ENST00000463184 IL17RBQ9NRM6 502 aa23.43■■□□□ 1.34
VARS-221ENST00000463184 ASTN1O14525 1302 aa23.42■■□□□ 1.34
VARS-221ENST00000463184 ZEB2O60315 1214 aa23.42■■□□□ 1.34
VARS-221ENST00000463184 MX1P20591 662 aa23.42■■□□□ 1.34
VARS-221ENST00000463184 TLK2Q86UE8 772 aa23.42■■□□□ 1.34
VARS-221ENST00000463184 SLC43A3Q8NBI5 491 aa23.42■■□□□ 1.34
VARS-221ENST00000463184 OTUD7AQ8TE49 926 aaPredicted RBP23.42■■□□□ 1.34
VARS-221ENST00000463184 PPP1R12CQ9BZL4 782 aa23.42■■□□□ 1.34
VARS-221ENST00000463184 AP5M1Q9H0R1 490 aa23.42■■□□□ 1.34
VARS-221ENST00000463184 PRR12Q9ULL5 1215 aa23.42■■□□□ 1.34
VARS-221ENST00000463184 PCDHB15Q9Y5E8 787 aa23.42■■□□□ 1.34
VARS-221ENST00000463184 CTDSPL2Q05D32 466 aa23.41■■□□□ 1.34
VARS-221ENST00000463184 FSCN1Q16658 493 aaKnown RBP23.41■■□□□ 1.34
VARS-221ENST00000463184 IQSEC1Q6DN90 963 aa23.41■■□□□ 1.34
VARS-221ENST00000463184 CXCL17Q6UXB2 119 aa23.41■■□□□ 1.34
VARS-221ENST00000463184 ZNF365Q70YC5 407 aa23.41■■□□□ 1.34
VARS-221ENST00000463184 SYMPKQ92797 1274 aaKnown RBP23.41■■□□□ 1.34
VARS-221ENST00000463184 CHMP4CQ96CF2 233 aa23.41■■□□□ 1.34
VARS-221ENST00000463184 PBX4Q9BYU1 374 aa23.41■■□□□ 1.34
VARS-221ENST00000463184 CYP39A1Q9NYL5 469 aa23.41■■□□□ 1.34
VARS-221ENST00000463184 Q9Y3F1 56 aa23.41■■□□□ 1.34
VARS-221ENST00000463184 FOXP2O15409 715 aa23.4■■□□□ 1.34
VARS-221ENST00000463184 DYNC1LI2O43237 492 aaPredicted RBP23.4■■□□□ 1.34
VARS-221ENST00000463184 ACRP10323 421 aa23.4■■□□□ 1.34
VARS-221ENST00000463184 SMPD1P17405 629 aa23.4■■□□□ 1.34
VARS-221ENST00000463184 ITGA7Q13683 1181 aa23.4■■□□□ 1.34
VARS-221ENST00000463184 IL23AQ9NPF7 189 aa23.4■■□□□ 1.34
VARS-221ENST00000463184 INCENPQ9NQS7 918 aa23.4■■□□□ 1.34
VARS-221ENST00000463184 ANAPC4Q9UJX5 808 aa23.4■■□□□ 1.34
VARS-221ENST00000463184 RANBP6O60518 1105 aaKnown RBP23.39■■□□□ 1.33
VARS-221ENST00000463184 NMT2O60551 498 aa23.39■■□□□ 1.33
VARS-221ENST00000463184 NOVP48745 357 aa23.39■■□□□ 1.33
VARS-221ENST00000463184 SNAP25P60880 206 aa23.39■■□□□ 1.33
VARS-221ENST00000463184 MUM1L1Q5H9M0 696 aa23.39■■□□□ 1.33
VARS-221ENST00000463184 TAPT1Q6NXT6 567 aa23.39■■□□□ 1.33
VARS-221ENST00000463184 CCPG1Q9ULG6 757 aa23.39■■□□□ 1.33
VARS-221ENST00000463184 ICAM1P05362 532 aa23.38■■□□□ 1.33
VARS-221ENST00000463184 CYP2C18P33260 490 aa23.38■■□□□ 1.33
VARS-221ENST00000463184 NSMFQ6X4W1 530 aa23.38■■□□□ 1.33
VARS-221ENST00000463184 MORC4Q8TE76 937 aa23.38■■□□□ 1.33
VARS-221ENST00000463184 DCAF4Q8WV16 495 aa23.38■■□□□ 1.33
VARS-221ENST00000463184 HERVK_113Q902F9 699 aa23.38■■□□□ 1.33
VARS-221ENST00000463184 MTIF3Q9H2K0 278 aaKnown RBP23.38■■□□□ 1.33
VARS-221ENST00000463184 HIPK3Q9H422 1215 aa23.38■■□□□ 1.33
VARS-221ENST00000463184 VTA1Q9NP79 307 aa23.38■■□□□ 1.33
VARS-221ENST00000463184 PDGFCQ9NRA1 345 aa23.38■■□□□ 1.33
VARS-221ENST00000463184 GRXCR1A8MXD5 290 aa23.37■■□□□ 1.33
VARS-221ENST00000463184 ORC4O43929 436 aa23.37■■□□□ 1.33
VARS-221ENST00000463184 FGBP02675 491 aa23.37■■□□□ 1.33
VARS-221ENST00000463184 FGRP09769 529 aa23.37■■□□□ 1.33
VARS-221ENST00000463184 PBX2P40425 430 aa23.37■■□□□ 1.33
VARS-221ENST00000463184 ALX1Q15699 326 aa23.37■■□□□ 1.33
VARS-221ENST00000463184 EEPD1Q7L9B9 569 aa23.37■■□□□ 1.33
VARS-221ENST00000463184 FBXO16Q8IX29 292 aaPredicted RBP23.37■■□□□ 1.33
VARS-221ENST00000463184 EVI5LQ96CN4 794 aa23.37■■□□□ 1.33
VARS-221ENST00000463184 GAS2L1Q99501 681 aaPredicted RBP23.37■■□□□ 1.33
VARS-221ENST00000463184 ZBTB47Q9UFB7 747 aaPredicted RBP23.37■■□□□ 1.33
VARS-221ENST00000463184 GRIN2DO15399 1336 aa23.36■■□□□ 1.33
VARS-221ENST00000463184 SALL3Q9BXA9 1300 aa23.36■■□□□ 1.33
VARS-221ENST00000463184 RAB30Q15771 203 aa23.36■■□□□ 1.33
VARS-221ENST00000463184 CCDC96Q2M329 555 aa23.36■■□□□ 1.33
VARS-221ENST00000463184 BTNL9Q6UXG8 535 aa23.36■■□□□ 1.33
VARS-221ENST00000463184 KIAA1211Q6ZU35 1233 aa23.36■■□□□ 1.33
VARS-221ENST00000463184 RANBP17Q9H2T7 1088 aaKnown RBP23.36■■□□□ 1.33
VARS-221ENST00000463184 HELLSQ9NRZ9 838 aa23.36■■□□□ 1.33
VARS-221ENST00000463184 ADD3Q9UEY8 706 aaKnown RBP23.36■■□□□ 1.33
VARS-221ENST00000463184 MSRAQ9UJ68 235 aa23.36■■□□□ 1.33
VARS-221ENST00000463184 MTMR7Q9Y216 660 aa23.36■■□□□ 1.33
VARS-221ENST00000463184 SUPT16HQ9Y5B9 1047 aaKnown RBP23.36■■□□□ 1.33
VARS-221ENST00000463184 DDX49Q9Y6V7 483 aaKnown RBP23.36■■□□□ 1.33
VARS-221ENST00000463184 LOC102724159A0A0B4J2E5 919 aa23.35■■□□□ 1.33
VARS-221ENST00000463184 PWP2Q15269 919 aaKnown RBP23.35■■□□□ 1.33
VARS-221ENST00000463184 VPS53Q5VIR6 699 aa23.35■■□□□ 1.33
VARS-221ENST00000463184 RASGRP2Q7LDG7 609 aa23.35■■□□□ 1.33
VARS-221ENST00000463184 USP38Q8NB14 1042 aa23.35■■□□□ 1.33
VARS-221ENST00000463184 DUSP28Q4G0W2 176 aa23.34■■□□□ 1.33
VARS-221ENST00000463184 TJAP1Q5JTD0 557 aa23.34■■□□□ 1.33
VARS-221ENST00000463184 B4GALT4O60513 344 aa23.33■■□□□ 1.33
VARS-221ENST00000463184 PTGS1P23219 599 aa23.33■■□□□ 1.33
VARS-221ENST00000463184 BAATQ14032 418 aaPredicted RBP23.33■■□□□ 1.33
VARS-221ENST00000463184 AKNAD1Q5T1N1 836 aa23.33■■□□□ 1.33
VARS-221ENST00000463184 SYDE2Q5VT97 1194 aa23.33■■□□□ 1.33
VARS-221ENST00000463184 TTBK2Q6IQ55 1244 aa23.33■■□□□ 1.33
VARS-221ENST00000463184 RPUSD2Q8IZ73 545 aaKnown RBP23.33■■□□□ 1.33
VARS-221ENST00000463184 PURBQ96QR8 312 aaKnown RBP23.33■■□□□ 1.33
VARS-221ENST00000463184 NOC4LQ9BVI4 516 aaKnown RBP23.33■■□□□ 1.33
VARS-221ENST00000463184 TRPV6Q9H1D0 765 aa23.33■■□□□ 1.33
VARS-221ENST00000463184 PRDM12Q9H4Q4 367 aa23.33■■□□□ 1.33
VARS-221ENST00000463184 TOMM22Q9NS69 142 aa23.33■■□□□ 1.33
VARS-221ENST00000463184 TCP11L1Q9NUJ3 509 aa23.33■■□□□ 1.33
VARS-221ENST00000463184 CXXC1Q9P0U4 656 aaPredicted RBP23.33■■□□□ 1.33
VARS-221ENST00000463184 SPTBN5Q9NRC6 3674 aaKnown RBP23.33■■□□□ 1.33
VARS-221ENST00000463184 UMODL1Q5DID0 1318 aa23.33■■□□□ 1.32
VARS-221ENST00000463184 TOP1P11387 765 aaKnown RBP23.32■■□□□ 1.32
VARS-221ENST00000463184 SLC16A2P36021 539 aa23.32■■□□□ 1.32
VARS-221ENST00000463184 ALDH5A1P51649 535 aaPredicted RBP23.32■■□□□ 1.32
VARS-221ENST00000463184 CCL23P55773 120 aa23.32■■□□□ 1.32
VARS-221ENST00000463184 PSMC6P62333 389 aa23.32■■□□□ 1.32
VARS-221ENST00000463184 TMEM63BQ5T3F8 832 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms