RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 NOP2P46087 812 aaKnown RBP6.57□□□□□ -1.36
USH2A-203ENST00000463147 GJA9P57773 515 aa6.57□□□□□ -1.36
USH2A-203ENST00000463147 HTRA3P83110 453 aa6.57□□□□□ -1.36
USH2A-203ENST00000463147 ZXDAP98168 799 aa6.57□□□□□ -1.36
USH2A-203ENST00000463147 MVKQ03426 396 aa6.57□□□□□ -1.36
USH2A-203ENST00000463147 AUHQ13825 339 aaKnown RBP6.57□□□□□ -1.36
USH2A-203ENST00000463147 FBXO27Q8NI29 283 aa6.57□□□□□ -1.36
USH2A-203ENST00000463147 DHRS1Q96LJ7 313 aa6.57□□□□□ -1.36
USH2A-203ENST00000463147 DSCC1Q9BVC3 393 aa6.57□□□□□ -1.36
USH2A-203ENST00000463147 MRS2Q9HD23 443 aa6.57□□□□□ -1.36
USH2A-203ENST00000463147 PDLIM7Q9NR12 457 aa6.57□□□□□ -1.36
USH2A-203ENST00000463147 SMPD4Q9NXE4 827 aa6.57□□□□□ -1.36
USH2A-203ENST00000463147 MEIS1O00470 390 aa6.56□□□□□ -1.36
USH2A-203ENST00000463147 TLR3O15455 904 aaKnown RBP6.56□□□□□ -1.36
USH2A-203ENST00000463147 ITGB3P05106 788 aa6.56□□□□□ -1.36
USH2A-203ENST00000463147 FBLN1P23142 703 aa6.56□□□□□ -1.36
USH2A-203ENST00000463147 CTSKP43235 329 aa6.56□□□□□ -1.36
USH2A-203ENST00000463147 ADAM17P78536 824 aa6.56□□□□□ -1.36
USH2A-203ENST00000463147 ZNF326Q5BKZ1 582 aaKnown RBP6.56□□□□□ -1.36
USH2A-203ENST00000463147 LDLRAD1Q5T700 205 aa6.56□□□□□ -1.36
USH2A-203ENST00000463147 FERMT3Q86UX7 667 aa6.56□□□□□ -1.36
USH2A-203ENST00000463147 REXO1Q8N1G1 1221 aaKnown RBP6.56□□□□□ -1.36
USH2A-203ENST00000463147 TTC9BQ8N6N2 239 aa6.56□□□□□ -1.36
USH2A-203ENST00000463147 TMEM52Q8NDY8 209 aa6.56□□□□□ -1.36
USH2A-203ENST00000463147 SPATA25Q9BR10 227 aa6.56□□□□□ -1.36
USH2A-203ENST00000463147 DBR1Q9UK59 544 aaKnown RBP6.56□□□□□ -1.36
USH2A-203ENST00000463147 C1QTNF3-AMACRE9PGA6 284 aa6.55□□□□□ -1.36
USH2A-203ENST00000463147 TNFRSF1AP19438 455 aa6.55□□□□□ -1.36
USH2A-203ENST00000463147 POLR2BP30876 1174 aaKnown RBP6.55□□□□□ -1.36
USH2A-203ENST00000463147 CEBPAP49715 358 aaPredicted RBP6.55□□□□□ -1.36
USH2A-203ENST00000463147 BICRALQ6AI39 1079 aa6.55□□□□□ -1.36
USH2A-203ENST00000463147 CARFQ8N187 725 aa6.55□□□□□ -1.36
USH2A-203ENST00000463147 NLGN2Q8NFZ4 835 aa6.55□□□□□ -1.36
USH2A-203ENST00000463147 ZNF512BQ96KM6 892 aaPredicted RBP6.55□□□□□ -1.36
USH2A-203ENST00000463147 MINPP1Q9UNW1 487 aa6.55□□□□□ -1.36
USH2A-203ENST00000463147 TNFRSF10CO14798 259 aa6.54□□□□□ -1.36
USH2A-203ENST00000463147 SUV39H1O43463 412 aa6.54□□□□□ -1.36
USH2A-203ENST00000463147 AKAP8O43823 692 aaKnown RBP6.54□□□□□ -1.36
USH2A-203ENST00000463147 GREM1O60565 184 aa6.54□□□□□ -1.36
USH2A-203ENST00000463147 PLA2G1BP04054 148 aaKnown RBP6.54□□□□□ -1.36
USH2A-203ENST00000463147 GSTM1P09488 218 aa6.54□□□□□ -1.36
USH2A-203ENST00000463147 NME1P15531 152 aaKnown RBP6.54□□□□□ -1.36
USH2A-203ENST00000463147 RTP2Q5QGT7 225 aa6.54□□□□□ -1.36
USH2A-203ENST00000463147 CPZQ66K79 652 aa6.54□□□□□ -1.36
USH2A-203ENST00000463147 CRTC3Q6UUV7 619 aa6.54□□□□□ -1.36
USH2A-203ENST00000463147 SAMD11Q96NU1 681 aa6.54□□□□□ -1.36
USH2A-203ENST00000463147 SRRTQ9BXP5 876 aaKnown RBP6.54□□□□□ -1.36
USH2A-203ENST00000463147 LNPKQ9C0E8 428 aa6.54□□□□□ -1.36
USH2A-203ENST00000463147 NOBOXO60393 691 aa6.53□□□□□ -1.36
USH2A-203ENST00000463147 TBC1D8O95759 1140 aa6.53□□□□□ -1.36
USH2A-203ENST00000463147 CNR2P34972 360 aa6.53□□□□□ -1.36
USH2A-203ENST00000463147 EIF4A3P38919 411 aaKnown RBP6.53□□□□□ -1.36
USH2A-203ENST00000463147 ZNF165P49910 485 aa6.53□□□□□ -1.36
USH2A-203ENST00000463147 FBXL19Q6PCT2 694 aa6.53□□□□□ -1.36
USH2A-203ENST00000463147 B3GNT8Q7Z7M8 397 aa6.53□□□□□ -1.36
USH2A-203ENST00000463147 CABP7Q86V35 215 aa6.53□□□□□ -1.36
USH2A-203ENST00000463147 C7orf61Q8IZ16 206 aa6.53□□□□□ -1.36
USH2A-203ENST00000463147 SMARCC1Q92922 1105 aaPredicted RBP6.53□□□□□ -1.36
USH2A-203ENST00000463147 SLC6A18Q96N87 628 aa6.53□□□□□ -1.36
USH2A-203ENST00000463147 C1QTNF3Q9BXJ4 246 aa6.53□□□□□ -1.36
USH2A-203ENST00000463147 NTMQ9P121 344 aa6.53□□□□□ -1.36
USH2A-203ENST00000463147 VTI1BQ9UEU0 232 aa6.53□□□□□ -1.36
USH2A-203ENST00000463147 MEIS3P2A8K0S8 358 aa6.52□□□□□ -1.37
USH2A-203ENST00000463147 F8W031 263 aaPredicted RBP6.52□□□□□ -1.37
USH2A-203ENST00000463147 ATF2P15336 505 aa6.52□□□□□ -1.37
USH2A-203ENST00000463147 MRPL58Q14197 206 aaKnown RBP6.52□□□□□ -1.37
USH2A-203ENST00000463147 TTLL7Q6ZT98 887 aa6.52□□□□□ -1.37
USH2A-203ENST00000463147 TMEM192Q8IY95 271 aa6.52□□□□□ -1.37
USH2A-203ENST00000463147 ZNF526Q8TF50 670 aaPredicted RBP6.52□□□□□ -1.37
USH2A-203ENST00000463147 SLC12A9Q9BXP2 914 aa6.52□□□□□ -1.37
USH2A-203ENST00000463147 KBTBD4Q9NVX7 518 aa6.52□□□□□ -1.37
USH2A-203ENST00000463147 PRR5P85299 388 aa6.51□□□□□ -1.37
USH2A-203ENST00000463147 SLC9A5Q14940 896 aa6.51□□□□□ -1.37
USH2A-203ENST00000463147 INTS3Q68E01 1043 aaKnown RBP6.51□□□□□ -1.37
USH2A-203ENST00000463147 ERMP1Q7Z2K6 904 aa6.51□□□□□ -1.37
USH2A-203ENST00000463147 USP48Q86UV5 1035 aa6.51□□□□□ -1.37
USH2A-203ENST00000463147 ADGRG2Q8IZP9 1017 aa6.51□□□□□ -1.37
USH2A-203ENST00000463147 ALG3Q92685 438 aa6.51□□□□□ -1.37
USH2A-203ENST00000463147 BACH2Q9BYV9 841 aa6.51□□□□□ -1.37
USH2A-203ENST00000463147 PCDH18Q9HCL0 1135 aa6.51□□□□□ -1.37
USH2A-203ENST00000463147 SUCOQ9UBS9 1254 aaKnown RBP6.51□□□□□ -1.37
USH2A-203ENST00000463147 NUDT5Q9UKK9 219 aa6.51□□□□□ -1.37
USH2A-203ENST00000463147 A0A1B0GTL3 188 aa6.5□□□□□ -1.37
USH2A-203ENST00000463147 MATN3O15232 486 aa6.5□□□□□ -1.37
USH2A-203ENST00000463147 FGF10O15520 208 aaPredicted RBP6.5□□□□□ -1.37
USH2A-203ENST00000463147 L1CAMP32004 1257 aa6.5□□□□□ -1.37
USH2A-203ENST00000463147 SARSP49591 514 aaKnown RBP6.5□□□□□ -1.37
USH2A-203ENST00000463147 ANKRD39Q53RE8 183 aa6.5□□□□□ -1.37
USH2A-203ENST00000463147 CCDC144CPQ8IYA2 1237 aa6.5□□□□□ -1.37
USH2A-203ENST00000463147 DDX1Q92499 740 aaKnown RBP6.5□□□□□ -1.37
USH2A-203ENST00000463147 TSPAN17Q96FV3 270 aa6.5□□□□□ -1.37
USH2A-203ENST00000463147 RBM15Q96T37 977 aaKnown RBP eCLIP6.5□□□□□ -1.37
USH2A-203ENST00000463147 ASGR2P07307 311 aa6.49□□□□□ -1.37
USH2A-203ENST00000463147 KIAA2012Q0VF49 1180 aa6.49□□□□□ -1.37
USH2A-203ENST00000463147 NOL9Q5SY16 702 aaKnown RBP6.49□□□□□ -1.37
USH2A-203ENST00000463147 GK5Q6ZS86 529 aa6.49□□□□□ -1.37
USH2A-203ENST00000463147 ZNF296Q8WUU4 475 aaPredicted RBP6.49□□□□□ -1.37
USH2A-203ENST00000463147 CPA5Q8WXQ8 436 aa6.49□□□□□ -1.37
USH2A-203ENST00000463147 FAM161BQ96MY7 647 aa6.49□□□□□ -1.37
USH2A-203ENST00000463147 SF3B6Q9Y3B4 125 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms