RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 SYNPO2Q9UMS6 1093 aa16.44■□□□□ 0.22
HDAC6-213ENST00000462730 PPP1R11O60927 126 aaPredicted RBP16.44■□□□□ 0.22
HDAC6-213ENST00000462730 DDNO94850 711 aaPredicted RBP16.44■□□□□ 0.22
HDAC6-213ENST00000462730 EPS15P42566 896 aa16.44■□□□□ 0.22
HDAC6-213ENST00000462730 KANK3Q6NY19 840 aa16.44■□□□□ 0.22
HDAC6-213ENST00000462730 MTMR8Q96EF0 704 aa16.44■□□□□ 0.22
HDAC6-213ENST00000462730 GMCL1Q96IK5 515 aa16.44■□□□□ 0.22
HDAC6-213ENST00000462730 NUP88Q99567 741 aaPredicted RBP16.44■□□□□ 0.22
HDAC6-213ENST00000462730 BPIFA3Q9BQP9 254 aa16.44■□□□□ 0.22
HDAC6-213ENST00000462730 TMEM260Q9NX78 707 aa16.44■□□□□ 0.22
HDAC6-213ENST00000462730 GGA3Q9NZ52 723 aa16.44■□□□□ 0.22
HDAC6-213ENST00000462730 PCDHA5Q9Y5H7 936 aa16.44■□□□□ 0.22
HDAC6-213ENST00000462730 ZBTB5O15062 677 aa16.43■□□□□ 0.22
HDAC6-213ENST00000462730 ZNF75DP51815 510 aa16.43■□□□□ 0.22
HDAC6-213ENST00000462730 APOBEC3FQ8IUX4 373 aaKnown RBP16.43■□□□□ 0.22
HDAC6-213ENST00000462730 ACER1Q8TDN7 264 aa16.43■□□□□ 0.22
HDAC6-213ENST00000462730 TRIM5Q9C035 493 aa16.43■□□□□ 0.22
HDAC6-213ENST00000462730 TMEM60Q9H2L4 133 aa16.43■□□□□ 0.22
HDAC6-213ENST00000462730 PHF20L1A8MW92 1017 aa16.42■□□□□ 0.22
HDAC6-213ENST00000462730 DYNC1I1O14576 645 aa16.42■□□□□ 0.22
HDAC6-213ENST00000462730 ASNSP08243 561 aa16.42■□□□□ 0.22
HDAC6-213ENST00000462730 LONP1P36776 959 aaKnown RBP16.42■□□□□ 0.22
HDAC6-213ENST00000462730 SPICE1Q8N0Z3 855 aa16.42■□□□□ 0.22
HDAC6-213ENST00000462730 TMX2Q9Y320 296 aa16.42■□□□□ 0.22
HDAC6-213ENST00000462730 SLFN14P0C7P3 912 aa16.42■□□□□ 0.22
HDAC6-213ENST00000462730 HIRAP54198 1017 aaPredicted RBP16.42■□□□□ 0.22
HDAC6-213ENST00000462730 LETM2Q2VYF4 491 aa16.42■□□□□ 0.22
HDAC6-213ENST00000462730 NBPF12Q5TAG4 269 aaPredicted RBP16.42■□□□□ 0.22
HDAC6-213ENST00000462730 C9orf131Q5VYM1 1079 aa16.42■□□□□ 0.22
HDAC6-213ENST00000462730 NEK8Q86SG6 692 aa16.42■□□□□ 0.22
HDAC6-213ENST00000462730 PLA2G4DQ86XP0 818 aa16.42■□□□□ 0.22
HDAC6-213ENST00000462730 TBCKQ8TEA7 893 aa16.42■□□□□ 0.22
HDAC6-213ENST00000462730 SMARCE1Q969G3 411 aa16.42■□□□□ 0.22
HDAC6-213ENST00000462730 CCDC34Q96HJ3 373 aa16.42■□□□□ 0.22
HDAC6-213ENST00000462730 RIC8AQ9NPQ8 531 aa16.42■□□□□ 0.22
HDAC6-213ENST00000462730 MAN1B1Q9UKM7 699 aa16.42■□□□□ 0.22
HDAC6-213ENST00000462730 CCNT1O60563 726 aaKnown RBP16.41■□□□□ 0.22
HDAC6-213ENST00000462730 BMP3P12645 472 aa16.41■□□□□ 0.22
HDAC6-213ENST00000462730 QRICH1Q2TAL8 776 aa16.41■□□□□ 0.22
HDAC6-213ENST00000462730 SARM1Q6SZW1 724 aa16.41■□□□□ 0.22
HDAC6-213ENST00000462730 DTHD1Q6ZMT9 781 aa16.41■□□□□ 0.22
HDAC6-213ENST00000462730 CCDC84Q86UT8 332 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-213ENST00000462730 SPC24Q8NBT2 197 aa16.41■□□□□ 0.22
HDAC6-213ENST00000462730 GOPCQ9HD26 462 aa16.41■□□□□ 0.22
HDAC6-213ENST00000462730 DOCK1Q14185 1865 aa16.41■□□□□ 0.22
HDAC6-213ENST00000462730 LAD1O00515 517 aa16.4■□□□□ 0.22
HDAC6-213ENST00000462730 CDC37Q16543 378 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-213ENST00000462730 KIAA1755Q5JYT7 1200 aa16.4■□□□□ 0.22
HDAC6-213ENST00000462730 PAGE5Q96GU1 130 aa16.4■□□□□ 0.22
HDAC6-213ENST00000462730 GLIS2Q9BZE0 524 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-213ENST00000462730 TMEM232C9JQI7 657 aa16.4■□□□□ 0.22
HDAC6-213ENST00000462730 LMOD1P29536 600 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-213ENST00000462730 TXLNAP40222 546 aa16.4■□□□□ 0.22
HDAC6-213ENST00000462730 AFMP43652 599 aa16.4■□□□□ 0.22
HDAC6-213ENST00000462730 IKQ13123 557 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-213ENST00000462730 UBE2SQ16763 222 aa16.4■□□□□ 0.22
HDAC6-213ENST00000462730 CUL5Q93034 780 aa16.4■□□□□ 0.22
HDAC6-213ENST00000462730 PYM1Q9BRP8 204 aaKnown RBP16.4■□□□□ 0.22
HDAC6-213ENST00000462730 SH2D4AQ9H788 454 aa16.4■□□□□ 0.22
HDAC6-213ENST00000462730 SMTNL1A8MU46 457 aa16.39■□□□□ 0.21
HDAC6-213ENST00000462730 NEMFO60524 1076 aa16.39■□□□□ 0.21
HDAC6-213ENST00000462730 SMC2O95347 1197 aa16.39■□□□□ 0.21
HDAC6-213ENST00000462730 OR52Z1P0C646 297 aa16.39■□□□□ 0.21
HDAC6-213ENST00000462730 PRPHP41219 470 aa16.39■□□□□ 0.21
HDAC6-213ENST00000462730 ZYXQ15942 572 aaKnown RBP16.39■□□□□ 0.21
HDAC6-213ENST00000462730 NT5DC1Q5TFE4 455 aa16.39■□□□□ 0.21
HDAC6-213ENST00000462730 PRAMEF18Q5VWM3 479 aa16.39■□□□□ 0.21
HDAC6-213ENST00000462730 SH3RF1Q7Z6J0 888 aa16.39■□□□□ 0.21
HDAC6-213ENST00000462730 IQUBQ8NA54 791 aa16.39■□□□□ 0.21
HDAC6-213ENST00000462730 VCPKMTQ9H867 229 aa16.39■□□□□ 0.21
HDAC6-213ENST00000462730 SARSP49591 514 aaKnown RBP16.38■□□□□ 0.21
HDAC6-213ENST00000462730 TPM4P67936 248 aa16.38■□□□□ 0.21
HDAC6-213ENST00000462730 ORC2Q13416 577 aaPredicted RBP16.38■□□□□ 0.21
HDAC6-213ENST00000462730 E2F4Q16254 413 aa16.38■□□□□ 0.21
HDAC6-213ENST00000462730 SYDE2Q5VT97 1194 aa16.38■□□□□ 0.21
HDAC6-213ENST00000462730 DCAF15Q66K64 600 aa16.38■□□□□ 0.21
HDAC6-213ENST00000462730 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.38■□□□□ 0.21
HDAC6-213ENST00000462730 SSC5DA1L4H1 1573 aa16.38■□□□□ 0.21
HDAC6-213ENST00000462730 GOLGA6L6A8MZA4 724 aa16.38■□□□□ 0.21
HDAC6-213ENST00000462730 CTNND1O60716 968 aaKnown RBP16.38■□□□□ 0.21
HDAC6-213ENST00000462730 BMP6P22004 513 aa16.38■□□□□ 0.21
HDAC6-213ENST00000462730 STAT2P52630 851 aa16.38■□□□□ 0.21
HDAC6-213ENST00000462730 MRPL12P52815 198 aaKnown RBP16.38■□□□□ 0.21
HDAC6-213ENST00000462730 SNAP25P60880 206 aa16.38■□□□□ 0.21
HDAC6-213ENST00000462730 MORC3Q14149 939 aa16.38■□□□□ 0.21
HDAC6-213ENST00000462730 FAM83BQ5T0W9 1011 aa16.38■□□□□ 0.21
HDAC6-213ENST00000462730 DRC7Q8IY82 874 aa16.38■□□□□ 0.21
HDAC6-213ENST00000462730 ZNF341Q9BYN7 854 aa16.38■□□□□ 0.21
HDAC6-213ENST00000462730 PSTPIP2Q9H939 334 aa16.38■□□□□ 0.21
HDAC6-213ENST00000462730 ADARB2Q9NS39 739 aaKnown RBP16.38■□□□□ 0.21
HDAC6-213ENST00000462730 IKBKBO14920 756 aa16.37■□□□□ 0.21
HDAC6-213ENST00000462730 CDC25AP30304 524 aa16.37■□□□□ 0.21
HDAC6-213ENST00000462730 CDC25BP30305 580 aa16.37■□□□□ 0.21
HDAC6-213ENST00000462730 INPP5BP32019 993 aa16.37■□□□□ 0.21
HDAC6-213ENST00000462730 CLK2P49760 499 aaKnown RBP16.37■□□□□ 0.21
HDAC6-213ENST00000462730 NCAPHQ15003 741 aa16.37■□□□□ 0.21
HDAC6-213ENST00000462730 PDXDC2PQ6P474 469 aa16.37■□□□□ 0.21
HDAC6-213ENST00000462730 BTNL9Q6UXG8 535 aa16.37■□□□□ 0.21
HDAC6-213ENST00000462730 TRIML1Q8N9V2 468 aa16.37■□□□□ 0.21
HDAC6-213ENST00000462730 ZNF830Q96NB3 372 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms