RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 AQP7O14520 342 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 ZBED1O96006 694 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 ADH7P40394 386 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 NKG7Q16617 165 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 C22orf34Q6ZV56 151 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 UBE2R2Q712K3 238 aaPredicted RBP3.89□□□□□ -1.79
SMC4-203ENST00000462668 KRT78Q8N1N4 520 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 Q8N1Y9 231 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 ZC3H10Q96K80 434 aaKnown RBP3.89□□□□□ -1.79
SMC4-203ENST00000462668 HERPUD2Q9BSE4 406 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 GBP3Q9H0R5 595 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 C1orf112Q9NSG2 853 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 NRBP1Q9UHY1 535 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 LAS1LQ9Y4W2 734 aaKnown RBP3.89□□□□□ -1.79
SMC4-203ENST00000462668 FIGNL2A6NMB9 653 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 DGAT1O75907 488 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 JMJD7P0C870 316 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 BMP1P13497 986 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 CPB1P15086 417 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 AUHQ13825 339 aaKnown RBP3.89□□□□□ -1.79
SMC4-203ENST00000462668 PCBP2Q15366 365 aaKnown RBP eCLIP3.89□□□□□ -1.79
SMC4-203ENST00000462668 NBPF9Q3BBW0 867 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 ATAT1Q5SQI0 421 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 SRGAP1Q7Z6B7 1085 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 KIAA0319LQ8IZA0 1049 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 CRACR2BQ8N4Y2 399 aaPredicted RBP3.89□□□□□ -1.79
SMC4-203ENST00000462668 GALNT11Q8NCW6 608 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 SNRNP27Q8WVK2 155 aaKnown RBP3.89□□□□□ -1.79
SMC4-203ENST00000462668 RSAD1Q9HA92 442 aa3.89□□□□□ -1.79
SMC4-203ENST00000462668 DDX20Q9UHI6 824 aaKnown RBP3.89□□□□□ -1.79
SMC4-203ENST00000462668 A0A1B0GVC2 190 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 BLACEA4D250 179 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 ZNF891A8MT65 544 aaPredicted RBP3.88□□□□□ -1.79
SMC4-203ENST00000462668 CLEC3AO75596 197 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 ZBTB48P10074 688 aaPredicted RBP3.88□□□□□ -1.79
SMC4-203ENST00000462668 RHCEP18577 417 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 RHDQ02161 417 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 TERF2Q15554 542 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 CFAP100Q494V2 611 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 DCAF15Q66K64 600 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 RNF141Q8WVD5 230 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 TIFAQ96CG3 184 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 KREMEN1Q96MU8 473 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 CORO1BQ9BR76 489 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 VTA1Q9NP79 307 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 GPR27Q9NS67 375 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 PHF24Q9UPV7 400 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 FKBP9O95302 570 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 SARSP49591 514 aaKnown RBP3.88□□□□□ -1.79
SMC4-203ENST00000462668 NEK3P51956 506 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 FOXD4Q12950 439 aaPredicted RBP3.88□□□□□ -1.79
SMC4-203ENST00000462668 SAFBQ15424 915 aaKnown RBP eCLIP3.88□□□□□ -1.792e-9■■□□□ 11.5
SMC4-203ENST00000462668 PIK3R6Q5UE93 754 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 E4F1Q66K89 784 aaPredicted RBP3.88□□□□□ -1.79
SMC4-203ENST00000462668 IL31Q6EBC2 164 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 KSR2Q6VAB6 950 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 FKBP9P1Q75LS8 142 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 KCT2Q8NC54 265 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 SMG8Q8ND04 991 aaKnown RBP3.88□□□□□ -1.79
SMC4-203ENST00000462668 ZSCAN18Q8TBC5 510 aaPredicted RBP3.88□□□□□ -1.79
SMC4-203ENST00000462668 USP7Q93009 1102 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 NDOR1Q9UHB4 597 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 ZBTB21Q9ULJ3 1066 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 ELOA3CA0A087WX78 387 aaPredicted RBP3.88□□□□□ -1.79
SMC4-203ENST00000462668 ELOA3DA6NLF2 546 aaPredicted RBP3.88□□□□□ -1.79
SMC4-203ENST00000462668 CRTAMO95727 393 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 LIG1P18858 919 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 SMAD3P84022 425 aaKnown RBP3.88□□□□□ -1.79
SMC4-203ENST00000462668 TMPRSS15P98073 1019 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 GSTM4Q03013 218 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 LRRC32Q14392 662 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 SMAD2Q15796 467 aaKnown RBP3.88□□□□□ -1.79
SMC4-203ENST00000462668 ELOA3BQ3SY89 546 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 HP1BP3Q5SSJ5 553 aaPredicted RBP3.88□□□□□ -1.79
SMC4-203ENST00000462668 DUSP27Q5VZP5 1158 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 ELMSAN1Q6PJG2 1045 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 TMTC2Q8N394 836 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 MFSD2AQ8NA29 543 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 ELOA3Q8NG57 546 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 FRS2Q8WU20 508 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 MCMBPQ9BTE3 642 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 SPTLC3Q9NUV7 552 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 SAMD15Q9P1V8 674 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 RGS17Q9UGC6 210 aaPredicted RBP3.88□□□□□ -1.79
SMC4-203ENST00000462668 AKT3Q9Y243 479 aa3.88□□□□□ -1.79
SMC4-203ENST00000462668 NRDCO43847 1150 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 PPM1BO75688 479 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 IARSP41252 1262 aaKnown RBP3.87□□□□□ -1.79
SMC4-203ENST00000462668 RNF4P78317 190 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 HTRA3P83110 453 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 ABCB5Q2M3G0 1257 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 SKOR2Q2VWA4 1001 aaPredicted RBP3.87□□□□□ -1.79
SMC4-203ENST00000462668 C12orf40Q86WS4 652 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 AMOTL1Q8IY63 956 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 SLC35G2Q8TBE7 412 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 FANCD2OSQ96PS1 177 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 FBXO9Q9UK97 447 aaPredicted RBP3.87□□□□□ -1.79
SMC4-203ENST00000462668 LZTS1Q9Y250 596 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 PRRT4C9JH25 899 aa3.87□□□□□ -1.79
SMC4-203ENST00000462668 OPA1O60313 960 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms