RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 WDR90Q96KV7 1748 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 FAM237AA0A1B0GTK4 181 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 USP17L15C9J2P7 530 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 USP17L13C9JLJ4 530 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 USP17L11C9JVI0 530 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 USP17L18D6R9N7 530 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 USP17L22D6RA61 530 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 USP17L17D6RBQ6 530 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 USP17L19D6RCP7 530 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 USP17L20D6RJB6 530 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 VCAM1P19320 739 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 BACE1P56817 501 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 USP17L24Q0WX57 530 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 USP17L6PQ6QN14 398 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 USP49Q70CQ1 688 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 ZNF280CQ8ND82 737 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 ZC3H15Q8WU90 426 aaKnown RBP17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 LPAR1Q92633 364 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 CDCA5Q96FF9 252 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 P2RX7Q99572 595 aaKnown RBP17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 TMEM60Q9H2L4 133 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 SNCAIPQ9Y6H5 919 aa17.11■□□□□ 0.33
RPRD1B-203ENST00000462548 POTEIP0CG38 1075 aa17.1■□□□□ 0.33
RPRD1B-203ENST00000462548 POTEJP0CG39 1038 aa17.1■□□□□ 0.33
RPRD1B-203ENST00000462548 RBM43Q6ZSC3 357 aaKnown RBP17.1■□□□□ 0.33
RPRD1B-203ENST00000462548 CKAP2LQ8IYA6 745 aa17.1■□□□□ 0.33
RPRD1B-203ENST00000462548 FUCA2Q9BTY2 467 aa17.1■□□□□ 0.33
RPRD1B-203ENST00000462548 TNMDQ9H2S6 317 aa17.1■□□□□ 0.33
RPRD1B-203ENST00000462548 BMP15O95972 392 aa17.1■□□□□ 0.33
RPRD1B-203ENST00000462548 MRPL12P52815 198 aaKnown RBP17.1■□□□□ 0.33
RPRD1B-203ENST00000462548 VGLL4Q14135 290 aa17.1■□□□□ 0.33
RPRD1B-203ENST00000462548 AS3MTQ9HBK9 375 aa17.1■□□□□ 0.33
RPRD1B-203ENST00000462548 MEIS2O14770 477 aa17.09■□□□□ 0.33
RPRD1B-203ENST00000462548 MAP3K9P80192 1104 aa17.09■□□□□ 0.33
RPRD1B-203ENST00000462548 LETM2Q2VYF4 491 aa17.09■□□□□ 0.33
RPRD1B-203ENST00000462548 MOB2Q70IA6 237 aa17.09■□□□□ 0.33
RPRD1B-203ENST00000462548 NEK8Q86SG6 692 aa17.09■□□□□ 0.33
RPRD1B-203ENST00000462548 RBSNQ9H1K0 784 aa17.09■□□□□ 0.33
RPRD1B-203ENST00000462548 KINO60870 393 aaKnown RBP17.09■□□□□ 0.33
RPRD1B-203ENST00000462548 ZNF202O95125 648 aa17.09■□□□□ 0.33
RPRD1B-203ENST00000462548 LETM1O95202 739 aaPredicted RBP17.09■□□□□ 0.33
RPRD1B-203ENST00000462548 MAP3K11Q16584 847 aa17.09■□□□□ 0.33
RPRD1B-203ENST00000462548 ZNF579Q8NAF0 562 aaKnown RBP17.09■□□□□ 0.33
RPRD1B-203ENST00000462548 CNKSR2Q8WXI2 1034 aa17.09■□□□□ 0.33
RPRD1B-203ENST00000462548 USP14P54578 494 aa17.08■□□□□ 0.33
RPRD1B-203ENST00000462548 HMGCS2P54868 508 aa17.08■□□□□ 0.33
RPRD1B-203ENST00000462548 SLF1Q9BQI6 1058 aa17.08■□□□□ 0.33
RPRD1B-203ENST00000462548 RPAP3Q9H6T3 665 aaPredicted RBP17.08■□□□□ 0.33
RPRD1B-203ENST00000462548 AFG3L2Q9Y4W6 797 aa17.08■□□□□ 0.33
RPRD1B-203ENST00000462548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.08■□□□□ 0.32
RPRD1B-203ENST00000462548 VWA3AA6NCI4 1184 aa17.08■□□□□ 0.32
RPRD1B-203ENST00000462548 IQCA1LA6NCM1 817 aa17.08■□□□□ 0.32
RPRD1B-203ENST00000462548 FERMT2Q96AC1 680 aa17.08■□□□□ 0.32
RPRD1B-203ENST00000462548 TANGO6Q9C0B7 1094 aa17.08■□□□□ 0.32
RPRD1B-203ENST00000462548 ZNF536O15090 1300 aa17.08■□□□□ 0.32
RPRD1B-203ENST00000462548 MYH7BA7E2Y1 1941 aa17.07■□□□□ 0.32
RPRD1B-203ENST00000462548 PARP14Q460N5 1801 aa17.07■□□□□ 0.32
RPRD1B-203ENST00000462548 CCNT1O60563 726 aaKnown RBP17.07■□□□□ 0.32
RPRD1B-203ENST00000462548 SYKP43405 635 aa17.07■□□□□ 0.32
RPRD1B-203ENST00000462548 TBC1D5Q92609 795 aa17.07■□□□□ 0.32
RPRD1B-203ENST00000462548 ERCC4Q92889 916 aaPredicted RBP17.07■□□□□ 0.32
RPRD1B-203ENST00000462548 EPSTI1Q96J88 318 aa17.07■□□□□ 0.32
RPRD1B-203ENST00000462548 TSPY26PQ9H489 355 aa17.07■□□□□ 0.32
RPRD1B-203ENST00000462548 GRPEL1Q9HAV7 217 aa17.07■□□□□ 0.32
RPRD1B-203ENST00000462548 KCNH3Q9ULD8 1083 aa17.07■□□□□ 0.32
RPRD1B-203ENST00000462548 PPP1R12BO60237 982 aaPredicted RBP17.07■□□□□ 0.32
RPRD1B-203ENST00000462548 TDP2O95551 362 aa17.07■□□□□ 0.32
RPRD1B-203ENST00000462548 PRPF38AQ8NAV1 312 aaKnown RBP17.07■□□□□ 0.32
RPRD1B-203ENST00000462548 C12orf42Q96LP6 360 aa17.07■□□□□ 0.32
RPRD1B-203ENST00000462548 LDHDQ86WU2 507 aa17.06■□□□□ 0.32
RPRD1B-203ENST00000462548 CLMNQ96JQ2 1002 aa17.06■□□□□ 0.32
RPRD1B-203ENST00000462548 AGBL1Q96MI9 1066 aa17.06■□□□□ 0.32
RPRD1B-203ENST00000462548 RLFQ13129 1914 aa17.06■□□□□ 0.32
RPRD1B-203ENST00000462548 A0A087X0B3 334 aa17.06■□□□□ 0.32
RPRD1B-203ENST00000462548 FLOT1O75955 427 aa17.06■□□□□ 0.32
RPRD1B-203ENST00000462548 XRCC6P12956 609 aaKnown RBP eCLIP17.06■□□□□ 0.32
RPRD1B-203ENST00000462548 FMR1Q06787 632 aaKnown RBP eCLIP17.06■□□□□ 0.32
RPRD1B-203ENST00000462548 WNK4Q96J92 1243 aa17.06■□□□□ 0.32
RPRD1B-203ENST00000462548 ANO3Q9BYT9 981 aa17.06■□□□□ 0.32
RPRD1B-203ENST00000462548 PANK2Q9BZ23 570 aa17.06■□□□□ 0.32
RPRD1B-203ENST00000462548 GLT8D2Q9H1C3 349 aa17.06■□□□□ 0.32
RPRD1B-203ENST00000462548 PPP1R9AQ9ULJ8 1098 aa17.06■□□□□ 0.32
RPRD1B-203ENST00000462548 SOCS7O14512 581 aa17.05■□□□□ 0.32
RPRD1B-203ENST00000462548 SLC37A4O43826 429 aa17.05■□□□□ 0.32
RPRD1B-203ENST00000462548 HOXA13P31271 388 aaPredicted RBP17.05■□□□□ 0.32
RPRD1B-203ENST00000462548 LONRF3Q496Y0 759 aa17.05■□□□□ 0.32
RPRD1B-203ENST00000462548 ARL6IP4Q66PJ3 421 aaKnown RBP17.05■□□□□ 0.32
RPRD1B-203ENST00000462548 PNMA8AQ86V59 439 aaPredicted RBP17.05■□□□□ 0.32
RPRD1B-203ENST00000462548 POTEDQ86YR6 584 aa17.05■□□□□ 0.32
RPRD1B-203ENST00000462548 SYMPKQ92797 1274 aaKnown RBP17.05■□□□□ 0.32
RPRD1B-203ENST00000462548 C19orf81C9J6K1 198 aa17.05■□□□□ 0.32
RPRD1B-203ENST00000462548 ELP3Q9H9T3 547 aa17.05■□□□□ 0.32
RPRD1B-203ENST00000462548 SLC38A10Q9HBR0 1119 aa17.05■□□□□ 0.32
RPRD1B-203ENST00000462548 FAM13BQ9NYF5 915 aa17.05■□□□□ 0.32
RPRD1B-203ENST00000462548 PTPRFP10586 1907 aa17.04■□□□□ 0.32
RPRD1B-203ENST00000462548 NEMFO60524 1076 aa17.04■□□□□ 0.32
RPRD1B-203ENST00000462548 IREB2P48200 963 aaKnown RBP17.04■□□□□ 0.32
RPRD1B-203ENST00000462548 CSADQ9Y600 493 aa17.04■□□□□ 0.32
RPRD1B-203ENST00000462548 A0A087WWV3 80 aa17.04■□□□□ 0.32
RPRD1B-203ENST00000462548 ICAM1P05362 532 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms