RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 KIF2CQ99661 725 aa18.2■□□□□ 0.5
SF3A3-203ENST00000461869 ABHD16BQ9H3Z7 469 aa18.2■□□□□ 0.5
SF3A3-203ENST00000461869 SLC38A10Q9HBR0 1119 aa18.2■□□□□ 0.5
SF3A3-203ENST00000461869 FBXO40Q9UH90 709 aa18.2■□□□□ 0.5
SF3A3-203ENST00000461869 A0A0U1RQG5 324 aaPredicted RBP18.19■□□□□ 0.5
SF3A3-203ENST00000461869 ARVCFO00192 962 aa18.19■□□□□ 0.5
SF3A3-203ENST00000461869 ADCY6O43306 1168 aa18.19■□□□□ 0.5
SF3A3-203ENST00000461869 ST18O60284 1047 aa18.19■□□□□ 0.5
SF3A3-203ENST00000461869 GJA9P57773 515 aa18.19■□□□□ 0.5
SF3A3-203ENST00000461869 TMEM240Q5SV17 173 aa18.19■□□□□ 0.5
SF3A3-203ENST00000461869 CREB3L3Q68CJ9 461 aa18.19■□□□□ 0.5
SF3A3-203ENST00000461869 C16orf59Q7L2K0 433 aa18.19■□□□□ 0.5
SF3A3-203ENST00000461869 TMEM199Q8N511 208 aa18.19■□□□□ 0.5
SF3A3-203ENST00000461869 USP38Q8NB14 1042 aa18.19■□□□□ 0.5
SF3A3-203ENST00000461869 CHST13Q8NET6 341 aa18.19■□□□□ 0.5
SF3A3-203ENST00000461869 UPF3AQ9H1J1 476 aaKnown RBP18.19■□□□□ 0.5
SF3A3-203ENST00000461869 DAXXQ9UER7 740 aaPredicted RBP18.19■□□□□ 0.5
SF3A3-203ENST00000461869 FEM1BQ9UK73 627 aa18.19■□□□□ 0.5
SF3A3-203ENST00000461869 GREB1LQ9C091 1923 aaPredicted RBP18.18■□□□□ 0.5
SF3A3-203ENST00000461869 IGKV6D-41A0A0C4DH26 115 aa18.18■□□□□ 0.5
SF3A3-203ENST00000461869 GRXCR1A8MXD5 290 aa18.18■□□□□ 0.5
SF3A3-203ENST00000461869 SLC27A2O14975 620 aa18.18■□□□□ 0.5
SF3A3-203ENST00000461869 CSF2RAP15509 400 aa18.18■□□□□ 0.5
SF3A3-203ENST00000461869 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.18■□□□□ 0.5
SF3A3-203ENST00000461869 ARMCX2Q7L311 632 aa18.18■□□□□ 0.5
SF3A3-203ENST00000461869 MKL1Q969V6 931 aa18.18■□□□□ 0.5
SF3A3-203ENST00000461869 CEP95Q96GE4 821 aa18.18■□□□□ 0.5
SF3A3-203ENST00000461869 FGD4Q96M96 766 aa18.18■□□□□ 0.5
SF3A3-203ENST00000461869 NACAP1Q9BZK3 213 aa18.18■□□□□ 0.5
SF3A3-203ENST00000461869 ZNF287Q9HBT7 754 aa18.18■□□□□ 0.5
SF3A3-203ENST00000461869 SNX14Q9Y5W7 946 aa18.18■□□□□ 0.5
SF3A3-203ENST00000461869 CDH23Q9H251 3354 aa18.18■□□□□ 0.5
SF3A3-203ENST00000461869 TLR3O15455 904 aaKnown RBP18.17■□□□□ 0.5
SF3A3-203ENST00000461869 PRDM1O75626 825 aa18.17■□□□□ 0.5
SF3A3-203ENST00000461869 PSMA5P28066 241 aa18.17■□□□□ 0.5
SF3A3-203ENST00000461869 PBX2P40425 430 aa18.17■□□□□ 0.5
SF3A3-203ENST00000461869 TDO2P48775 406 aa18.17■□□□□ 0.5
SF3A3-203ENST00000461869 OAZ1P54368 228 aa18.17■□□□□ 0.5
SF3A3-203ENST00000461869 IMMTQ16891 758 aaKnown RBP18.17■□□□□ 0.5
SF3A3-203ENST00000461869 TSGA10IPQ3SY00 556 aa18.17■□□□□ 0.5
SF3A3-203ENST00000461869 TJAP1Q5JTD0 557 aa18.17■□□□□ 0.5
SF3A3-203ENST00000461869 VPS53Q5VIR6 699 aa18.17■□□□□ 0.5
SF3A3-203ENST00000461869 HSCBQ8IWL3 235 aa18.17■□□□□ 0.5
SF3A3-203ENST00000461869 FAM126BQ8IXS8 530 aa18.17■□□□□ 0.5
SF3A3-203ENST00000461869 CCDC144CPQ8IYA2 1237 aa18.17■□□□□ 0.5
SF3A3-203ENST00000461869 LRRC47Q8N1G4 583 aaKnown RBP18.17■□□□□ 0.5
SF3A3-203ENST00000461869 SNX21Q969T3 373 aa18.17■□□□□ 0.5
SF3A3-203ENST00000461869 PBX4Q9BYU1 374 aa18.17■□□□□ 0.5
SF3A3-203ENST00000461869 PPP1R12CQ9BZL4 782 aa18.17■□□□□ 0.5
SF3A3-203ENST00000461869 TM6SF1Q9BZW5 370 aa18.17■□□□□ 0.5
SF3A3-203ENST00000461869 MTMR4Q9NYA4 1195 aa18.17■□□□□ 0.5
SF3A3-203ENST00000461869 LAMA4Q16363 1823 aa18.16■□□□□ 0.5
SF3A3-203ENST00000461869 VCANP13611 3396 aa18.16■□□□□ 0.5
SF3A3-203ENST00000461869 PATL2C9JE40 543 aaKnown RBP18.16■□□□□ 0.5
SF3A3-203ENST00000461869 TTLL1O95922 423 aa18.16■□□□□ 0.5
SF3A3-203ENST00000461869 APPP05067 770 aa18.16■□□□□ 0.5
SF3A3-203ENST00000461869 ACRP10323 421 aa18.16■□□□□ 0.5
SF3A3-203ENST00000461869 ALX1Q15699 326 aa18.16■□□□□ 0.5
SF3A3-203ENST00000461869 RASIP1Q5U651 963 aa18.16■□□□□ 0.5
SF3A3-203ENST00000461869 ZNF365Q70YC5 407 aa18.16■□□□□ 0.5
SF3A3-203ENST00000461869 GMCL1P1Q8NEA9 526 aa18.16■□□□□ 0.5
SF3A3-203ENST00000461869 PPM1EQ8WY54 764 aa18.16■□□□□ 0.5
SF3A3-203ENST00000461869 GAS2L1Q99501 681 aaPredicted RBP18.16■□□□□ 0.5
SF3A3-203ENST00000461869 HOMER2Q9NSB8 354 aa18.16■□□□□ 0.5
SF3A3-203ENST00000461869 SYNPO2Q9UMS6 1093 aa18.16■□□□□ 0.5
SF3A3-203ENST00000461869 CTAGE5O15320 804 aa18.15■□□□□ 0.5
SF3A3-203ENST00000461869 BMP3P12645 472 aa18.15■□□□□ 0.5
SF3A3-203ENST00000461869 CNTN2Q02246 1040 aa18.15■□□□□ 0.5
SF3A3-203ENST00000461869 SLFN13Q68D06 897 aa18.15■□□□□ 0.5
SF3A3-203ENST00000461869 PSRC1Q6PGN9 363 aaPredicted RBP18.15■□□□□ 0.5
SF3A3-203ENST00000461869 NOL8Q76FK4 1167 aaKnown RBP18.15■□□□□ 0.5
SF3A3-203ENST00000461869 KATNBL1Q9H079 304 aa18.15■□□□□ 0.5
SF3A3-203ENST00000461869 NAPBQ9H115 298 aa18.15■□□□□ 0.5
SF3A3-203ENST00000461869 PRDM12Q9H4Q4 367 aa18.15■□□□□ 0.5
SF3A3-203ENST00000461869 EPB41L4AQ9HCS5 686 aaPredicted RBP18.15■□□□□ 0.5
SF3A3-203ENST00000461869 ISY1Q9ULR0 285 aaKnown RBP18.15■□□□□ 0.5
SF3A3-203ENST00000461869 FDX1P10109 184 aa18.14■□□□□ 0.49
SF3A3-203ENST00000461869 CYP2C18P33260 490 aa18.14■□□□□ 0.49
SF3A3-203ENST00000461869 MCM2P49736 904 aa18.14■□□□□ 0.49
SF3A3-203ENST00000461869 NKX3-2P78367 333 aa18.14■□□□□ 0.49
SF3A3-203ENST00000461869 BEX3Q00994 111 aa18.14■□□□□ 0.49
SF3A3-203ENST00000461869 TNFAIP2Q03169 654 aa18.14■□□□□ 0.49
SF3A3-203ENST00000461869 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.13■□□□□ 0.49
SF3A3-203ENST00000461869 TMEM232C9JQI7 657 aa18.13■□□□□ 0.49
SF3A3-203ENST00000461869 TNFRSF10AO00220 468 aa18.13■□□□□ 0.49
SF3A3-203ENST00000461869 FOXP2O15409 715 aa18.13■□□□□ 0.49
SF3A3-203ENST00000461869 CD4P01730 458 aa18.13■□□□□ 0.49
SF3A3-203ENST00000461869 FGAP02671 866 aa18.13■□□□□ 0.49
SF3A3-203ENST00000461869 CYP21A2P08686 494 aa18.13■□□□□ 0.49
SF3A3-203ENST00000461869 TSPY3P0CV98 308 aa18.13■□□□□ 0.49
SF3A3-203ENST00000461869 TSPY8P0CW00 308 aa18.13■□□□□ 0.49
SF3A3-203ENST00000461869 CXCL17Q6UXB2 119 aa18.13■□□□□ 0.49
SF3A3-203ENST00000461869 RASEFQ8IZ41 740 aa18.13■□□□□ 0.49
SF3A3-203ENST00000461869 FAM133AQ8N9E0 248 aa18.13■□□□□ 0.49
SF3A3-203ENST00000461869 ACAD9Q9H845 621 aa18.13■□□□□ 0.49
SF3A3-203ENST00000461869 IL23AQ9NPF7 189 aa18.13■□□□□ 0.49
SF3A3-203ENST00000461869 ZNF213O14771 459 aa18.12■□□□□ 0.49
SF3A3-203ENST00000461869 HMGB1P09429 215 aaKnown RBP18.12■□□□□ 0.49
SF3A3-203ENST00000461869 NEK4P51957 841 aa18.12■□□□□ 0.49
SF3A3-203ENST00000461869 STAT2P52630 851 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms