RNA–Protein interactions for RNA: ENST00000461762.5

C9orf78-204, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-204ENST00000461762 ROBO3Q96MS0 1386 aa16.9■□□□□ 0.3
C9orf78-204ENST00000461762 RCCD1A6NED2 376 aa16.89■□□□□ 0.3
C9orf78-204ENST00000461762 PES1O00541 588 aaKnown RBP16.89■□□□□ 0.3
C9orf78-204ENST00000461762 CAPN2P17655 700 aa16.89■□□□□ 0.3
C9orf78-204ENST00000461762 PLCG1P19174 1290 aa16.89■□□□□ 0.3
C9orf78-204ENST00000461762 ACTN2P35609 894 aa16.89■□□□□ 0.3
C9orf78-204ENST00000461762 ZBED6P86452 979 aa16.89■□□□□ 0.3
C9orf78-204ENST00000461762 TBC1D8BQ0IIM8 1120 aa16.89■□□□□ 0.3
C9orf78-204ENST00000461762 SLC4A8Q2Y0W8 1093 aa16.89■□□□□ 0.3
C9orf78-204ENST00000461762 HEATR3Q7Z4Q2 680 aa16.89■□□□□ 0.3
C9orf78-204ENST00000461762 EHBP1Q8NDI1 1231 aa16.89■□□□□ 0.3
C9orf78-204ENST00000461762 NLRP3Q96P20 1036 aa16.89■□□□□ 0.3
C9orf78-204ENST00000461762 PURBQ96QR8 312 aaKnown RBP16.89■□□□□ 0.3
C9orf78-204ENST00000461762 LACRTQ9GZZ8 138 aa16.89■□□□□ 0.3
C9orf78-204ENST00000461762 VIPAS39Q9H9C1 493 aa16.89■□□□□ 0.3
C9orf78-204ENST00000461762 KCNQ2O43526 872 aa16.89■□□□□ 0.29
C9orf78-204ENST00000461762 KRT86O43790 486 aa16.89■□□□□ 0.29
C9orf78-204ENST00000461762 CYLC1P35663 651 aaPredicted RBP16.89■□□□□ 0.29
C9orf78-204ENST00000461762 CDK17Q00537 523 aa16.89■□□□□ 0.29
C9orf78-204ENST00000461762 RAD51AP2Q09MP3 1159 aa16.89■□□□□ 0.29
C9orf78-204ENST00000461762 CABP7Q86V35 215 aa16.89■□□□□ 0.29
C9orf78-204ENST00000461762 DZIP1Q86YF9 867 aaKnown RBP16.89■□□□□ 0.29
C9orf78-204ENST00000461762 ZSCAN29Q8IWY8 852 aaPredicted RBP16.89■□□□□ 0.29
C9orf78-204ENST00000461762 FAM71BQ8TC56 605 aa16.89■□□□□ 0.29
C9orf78-204ENST00000461762 JAKMIP2Q96AA8 810 aa16.89■□□□□ 0.29
C9orf78-204ENST00000461762 ZMYND12Q9H0C1 365 aa16.89■□□□□ 0.29
C9orf78-204ENST00000461762 NHEJ1Q9H9Q4 299 aaPredicted RBP16.89■□□□□ 0.29
C9orf78-204ENST00000461762 BICDL2A1A5D9 508 aa16.88■□□□□ 0.29
C9orf78-204ENST00000461762 TARSL2A2RTX5 802 aaKnown RBP16.88■□□□□ 0.29
C9orf78-204ENST00000461762 SRGAP2O75044 1071 aa16.88■□□□□ 0.29
C9orf78-204ENST00000461762 KLK7P49862 253 aa16.88■□□□□ 0.29
C9orf78-204ENST00000461762 STK4Q13043 487 aa16.88■□□□□ 0.29
C9orf78-204ENST00000461762 TXNRD1Q16881 649 aa16.88■□□□□ 0.29
C9orf78-204ENST00000461762 COBLL1Q53SF7 1204 aa16.88■□□□□ 0.29
C9orf78-204ENST00000461762 FIGNQ5HY92 759 aa16.88■□□□□ 0.29
C9orf78-204ENST00000461762 MIIPQ5JXC2 388 aa16.88■□□□□ 0.29
C9orf78-204ENST00000461762 BARGINQ6ZT62 677 aa16.88■□□□□ 0.29
C9orf78-204ENST00000461762 RPGRIP1Q96KN7 1286 aa16.88■□□□□ 0.29
C9orf78-204ENST00000461762 TMEM47Q9BQJ4 181 aa16.88■□□□□ 0.29
C9orf78-204ENST00000461762 LZTS2Q9BRK4 669 aa16.88■□□□□ 0.29
C9orf78-204ENST00000461762 MKNK2Q9HBH9 465 aa16.88■□□□□ 0.29
C9orf78-204ENST00000461762 JAG2Q9Y219 1238 aa16.88■□□□□ 0.29
C9orf78-204ENST00000461762 SH3RF3Q8TEJ3 882 aaPredicted RBP16.88■□□□□ 0.29
C9orf78-204ENST00000461762 ERGIC2Q96RQ1 377 aa16.88■□□□□ 0.29
C9orf78-204ENST00000461762 MED4Q9NPJ6 270 aa16.88■□□□□ 0.29
C9orf78-204ENST00000461762 ZNHIT6Q9NWK9 470 aaKnown RBP16.88■□□□□ 0.29
C9orf78-204ENST00000461762 A0A1W2PQJ5 194 aa16.87■□□□□ 0.29
C9orf78-204ENST00000461762 TRIM21P19474 475 aaKnown RBP16.87■□□□□ 0.29
C9orf78-204ENST00000461762 MCM3P25205 808 aa16.87■□□□□ 0.29
C9orf78-204ENST00000461762 TM4SF1P30408 202 aa16.87■□□□□ 0.29
C9orf78-204ENST00000461762 AARSP49588 968 aaKnown RBP eCLIP16.87■□□□□ 0.29
C9orf78-204ENST00000461762 PDE4DQ08499 809 aa16.87■□□□□ 0.29
C9orf78-204ENST00000461762 KIAA1328Q86T90 577 aa16.87■□□□□ 0.29
C9orf78-204ENST00000461762 CNOT6LQ96LI5 555 aaKnown RBP16.87■□□□□ 0.29
C9orf78-204ENST00000461762 NYXQ9GZU5 481 aa16.87■□□□□ 0.29
C9orf78-204ENST00000461762 SPATA31A5Q5VU36 1347 aa16.87■□□□□ 0.29
C9orf78-204ENST00000461762 SPATA31A7Q8IWB4 1347 aa16.87■□□□□ 0.29
C9orf78-204ENST00000461762 ANO9A1A5B4 782 aa16.87■□□□□ 0.29
C9orf78-204ENST00000461762 RPS6KA5O75582 802 aa16.87■□□□□ 0.29
C9orf78-204ENST00000461762 OR52Z1P0C646 297 aa16.87■□□□□ 0.29
C9orf78-204ENST00000461762 TSPY3P0CV98 308 aa16.87■□□□□ 0.29
C9orf78-204ENST00000461762 TSPY8P0CW00 308 aa16.87■□□□□ 0.29
C9orf78-204ENST00000461762 PPP1R2P41236 205 aa16.87■□□□□ 0.29
C9orf78-204ENST00000461762 FAM114A1Q8IWE2 563 aa16.87■□□□□ 0.29
C9orf78-204ENST00000461762 PPP4CP60510 307 aa16.86■□□□□ 0.29
C9orf78-204ENST00000461762 KRT25Q7Z3Z0 450 aa16.86■□□□□ 0.29
C9orf78-204ENST00000461762 ZNF444Q8N0Y2 327 aaPredicted RBP16.86■□□□□ 0.29
C9orf78-204ENST00000461762 CCDC47Q96A33 483 aaKnown RBP16.86■□□□□ 0.29
C9orf78-204ENST00000461762 EEF2KMTQ96G04 330 aa16.86■□□□□ 0.29
C9orf78-204ENST00000461762 MMTAG2Q9BU76 263 aaKnown RBP16.86■□□□□ 0.29
C9orf78-204ENST00000461762 SPZ1Q9BXG8 430 aa16.86■□□□□ 0.29
C9orf78-204ENST00000461762 ACBD3Q9H3P7 528 aa16.86■□□□□ 0.29
C9orf78-204ENST00000461762 TMEM51Q9NW97 253 aa16.86■□□□□ 0.29
C9orf78-204ENST00000461762 COL5A3P25940 1745 aaPredicted RBP16.86■□□□□ 0.29
C9orf78-204ENST00000461762 KLRF2D3W0D1 207 aa16.86■□□□□ 0.29
C9orf78-204ENST00000461762 FCER1AP12319 257 aa16.86■□□□□ 0.29
C9orf78-204ENST00000461762 HNRNPH3P31942 346 aaKnown RBP16.86■□□□□ 0.29
C9orf78-204ENST00000461762 CKAP4Q07065 602 aaKnown RBP16.86■□□□□ 0.29
C9orf78-204ENST00000461762 HSP90B2PQ58FF3 399 aa16.86■□□□□ 0.29
C9orf78-204ENST00000461762 CCDC102AQ96A19 550 aa16.86■□□□□ 0.29
C9orf78-204ENST00000461762 NOC4LQ9BVI4 516 aaKnown RBP16.86■□□□□ 0.29
C9orf78-204ENST00000461762 CWC15Q9P013 229 aaKnown RBP16.86■□□□□ 0.29
C9orf78-204ENST00000461762 DUSP10Q9Y6W6 482 aa16.86■□□□□ 0.29
C9orf78-204ENST00000461762 NKRFO15226 690 aaKnown RBP eCLIP16.85■□□□□ 0.29
C9orf78-204ENST00000461762 LDHBP07195 334 aaKnown RBP16.85■□□□□ 0.29
C9orf78-204ENST00000461762 RASA1P20936 1047 aa16.85■□□□□ 0.29
C9orf78-204ENST00000461762 NONOQ15233 471 aaKnown RBP eCLIP16.85■□□□□ 0.29
C9orf78-204ENST00000461762 SMIM5Q71RC9 77 aa16.85■□□□□ 0.29
C9orf78-204ENST00000461762 SLC44A5Q8NCS7 719 aa16.85■□□□□ 0.29
C9orf78-204ENST00000461762 ZBTB9Q96C00 473 aa16.85■□□□□ 0.29
C9orf78-204ENST00000461762 PDE2AO00408 941 aaPredicted RBP16.85■□□□□ 0.29
C9orf78-204ENST00000461762 ZNF263O14978 683 aa16.85■□□□□ 0.29
C9orf78-204ENST00000461762 CCNT1O60563 726 aaKnown RBP16.85■□□□□ 0.29
C9orf78-204ENST00000461762 SYF2O95926 243 aaKnown RBP16.85■□□□□ 0.29
C9orf78-204ENST00000461762 GOLGA8HP0CJ92 632 aa16.85■□□□□ 0.29
C9orf78-204ENST00000461762 MTIF2P46199 727 aaKnown RBP16.85■□□□□ 0.29
C9orf78-204ENST00000461762 ASIC1P78348 528 aa16.85■□□□□ 0.29
C9orf78-204ENST00000461762 LETM2Q2VYF4 491 aa16.85■□□□□ 0.29
C9orf78-204ENST00000461762 CENPPQ6IPU0 288 aa16.85■□□□□ 0.29
C9orf78-204ENST00000461762 WDR66Q8TBY9 1149 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms