RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 PCP11498 1178 aaKnown RBP18.22■□□□□ 0.51
NUP50-213ENST00000461437 BMP8BP34820 402 aa18.22■□□□□ 0.51
NUP50-213ENST00000461437 IMMTQ16891 758 aaKnown RBP18.22■□□□□ 0.51
NUP50-213ENST00000461437 TKFCQ3LXA3 575 aa18.22■□□□□ 0.51
NUP50-213ENST00000461437 SLC30A10Q6XR72 485 aa18.22■□□□□ 0.51
NUP50-213ENST00000461437 ZSWIM5Q9P217 1185 aa18.22■□□□□ 0.51
NUP50-213ENST00000461437 TAF6LQ9Y6J9 622 aa18.22■□□□□ 0.51
NUP50-213ENST00000461437 C6orf222P0C671 652 aaPredicted RBP18.21■□□□□ 0.51
NUP50-213ENST00000461437 SNHG28P0DPA3 235 aa18.21■□□□□ 0.51
NUP50-213ENST00000461437 CHMLP26374 656 aa18.21■□□□□ 0.51
NUP50-213ENST00000461437 TLE2Q04725 743 aa18.21■□□□□ 0.51
NUP50-213ENST00000461437 BAATQ14032 418 aaPredicted RBP18.21■□□□□ 0.51
NUP50-213ENST00000461437 SNX17Q15036 470 aa18.21■□□□□ 0.51
NUP50-213ENST00000461437 FBXO16Q8IX29 292 aaPredicted RBP18.21■□□□□ 0.51
NUP50-213ENST00000461437 ENAHQ8N8S7 591 aaPredicted RBP18.21■□□□□ 0.51
NUP50-213ENST00000461437 PNMA1Q8ND90 353 aa18.21■□□□□ 0.51
NUP50-213ENST00000461437 TTC14Q96N46 770 aa18.21■□□□□ 0.51
NUP50-213ENST00000461437 ABHD16BQ9H3Z7 469 aa18.21■□□□□ 0.51
NUP50-213ENST00000461437 PDLIM7Q9NR12 457 aa18.21■□□□□ 0.51
NUP50-213ENST00000461437 PDGFCQ9NRA1 345 aa18.21■□□□□ 0.51
NUP50-213ENST00000461437 TNKSO95271 1327 aa18.21■□□□□ 0.51
NUP50-213ENST00000461437 A0A1W2PPC1 479 aa18.2■□□□□ 0.5
NUP50-213ENST00000461437 TRIM43BA6NCK2 446 aa18.2■□□□□ 0.5
NUP50-213ENST00000461437 ACLYP53396 1101 aa18.2■□□□□ 0.5
NUP50-213ENST00000461437 BEX3Q00994 111 aa18.2■□□□□ 0.5
NUP50-213ENST00000461437 KCNA10Q16322 511 aa18.2■□□□□ 0.5
NUP50-213ENST00000461437 USH1GQ495M9 461 aa18.2■□□□□ 0.5
NUP50-213ENST00000461437 CYB5R4Q7L1T6 521 aa18.2■□□□□ 0.5
NUP50-213ENST00000461437 TDHQ8IZJ6 230 aa18.2■□□□□ 0.5
NUP50-213ENST00000461437 KLHDC9Q8NEP7 349 aa18.2■□□□□ 0.5
NUP50-213ENST00000461437 TRIM43Q96BQ3 446 aaPredicted RBP18.2■□□□□ 0.5
NUP50-213ENST00000461437 ZSCAN10Q96SZ4 725 aaPredicted RBP18.2■□□□□ 0.5
NUP50-213ENST00000461437 KAT14Q9H8E8 782 aa18.2■□□□□ 0.5
NUP50-213ENST00000461437 PTPDC1A2A3K4 754 aa18.19■□□□□ 0.5
NUP50-213ENST00000461437 PQBP1O60828 265 aaKnown RBP18.19■□□□□ 0.5
NUP50-213ENST00000461437 DUSP11O75319 330 aaKnown RBP18.19■□□□□ 0.5
NUP50-213ENST00000461437 ITGB8P26012 769 aa18.19■□□□□ 0.5
NUP50-213ENST00000461437 CALML3P27482 149 aa18.19■□□□□ 0.5
NUP50-213ENST00000461437 CCSAPQ6IQ19 270 aaPredicted RBP18.19■□□□□ 0.5
NUP50-213ENST00000461437 NOL8Q76FK4 1167 aaKnown RBP18.19■□□□□ 0.5
NUP50-213ENST00000461437 IQCA1Q86XH1 822 aa18.19■□□□□ 0.5
NUP50-213ENST00000461437 DGKHQ86XP1 1220 aa18.19■□□□□ 0.5
NUP50-213ENST00000461437 CLEC4DQ8WXI8 215 aa18.19■□□□□ 0.5
NUP50-213ENST00000461437 PRKAG2Q9UGJ0 569 aa18.19■□□□□ 0.5
NUP50-213ENST00000461437 CTNNA3Q9UI47 895 aa18.19■□□□□ 0.5
NUP50-213ENST00000461437 CTAGE5O15320 804 aa18.18■□□□□ 0.5
NUP50-213ENST00000461437 BADQ92934 168 aa18.18■□□□□ 0.5
NUP50-213ENST00000461437 LBHD1Q9BQE6 289 aaPredicted RBP18.18■□□□□ 0.5
NUP50-213ENST00000461437 STARD7Q9NQZ5 370 aa18.18■□□□□ 0.5
NUP50-213ENST00000461437 ASB14A6NK59 587 aa18.17■□□□□ 0.5
NUP50-213ENST00000461437 ASGR1P07306 291 aa18.17■□□□□ 0.5
NUP50-213ENST00000461437 CYP21A2P08686 494 aa18.17■□□□□ 0.5
NUP50-213ENST00000461437 SMPD1P17405 629 aa18.17■□□□□ 0.5
NUP50-213ENST00000461437 ALDH5A1P51649 535 aaPredicted RBP18.17■□□□□ 0.5
NUP50-213ENST00000461437 TNFAIP2Q03169 654 aa18.17■□□□□ 0.5
NUP50-213ENST00000461437 TAPT1Q6NXT6 567 aa18.17■□□□□ 0.5
NUP50-213ENST00000461437 Q7L0L9 218 aa18.17■□□□□ 0.5
NUP50-213ENST00000461437 TBC1D5Q92609 795 aa18.17■□□□□ 0.5
NUP50-213ENST00000461437 KRT23Q9C075 422 aa18.17■□□□□ 0.5
NUP50-213ENST00000461437 SENP2Q9HC62 589 aa18.17■□□□□ 0.5
NUP50-213ENST00000461437 VAT1LQ9HCJ6 419 aa18.17■□□□□ 0.5
NUP50-213ENST00000461437 RAD50Q92878 1312 aa18.17■□□□□ 0.5
NUP50-213ENST00000461437 GJA9P57773 515 aa18.16■□□□□ 0.5
NUP50-213ENST00000461437 CDC37Q16543 378 aaPredicted RBP18.16■□□□□ 0.5
NUP50-213ENST00000461437 GNASQ5JWF2 1037 aa18.16■□□□□ 0.5
NUP50-213ENST00000461437 C9orf50Q5SZB4 431 aa18.16■□□□□ 0.5
NUP50-213ENST00000461437 STOX1Q6ZVD7 989 aa18.16■□□□□ 0.5
NUP50-213ENST00000461437 CHST3Q7LGC8 479 aa18.16■□□□□ 0.5
NUP50-213ENST00000461437 ADGRF4Q8IZF3 695 aa18.16■□□□□ 0.5
NUP50-213ENST00000461437 STAG2Q8N3U4 1231 aa18.16■□□□□ 0.5
NUP50-213ENST00000461437 ANKS1AQ92625 1134 aa18.16■□□□□ 0.5
NUP50-213ENST00000461437 UPF3AQ9H1J1 476 aaKnown RBP18.16■□□□□ 0.5
NUP50-213ENST00000461437 SGSM2O43147 1006 aa18.15■□□□□ 0.5
NUP50-213ENST00000461437 DHX16O60231 1041 aaKnown RBP18.15■□□□□ 0.5
NUP50-213ENST00000461437 CLTBP09497 229 aa18.15■□□□□ 0.5
NUP50-213ENST00000461437 SEC23AQ15436 765 aa18.15■□□□□ 0.5
NUP50-213ENST00000461437 GPATCH4Q5T3I0 446 aaKnown RBP18.15■□□□□ 0.5
NUP50-213ENST00000461437 RNF207Q6ZRF8 634 aa18.15■□□□□ 0.5
NUP50-213ENST00000461437 TLK2Q86UE8 772 aa18.15■□□□□ 0.5
NUP50-213ENST00000461437 VTI1AQ96AJ9 217 aa18.15■□□□□ 0.5
NUP50-213ENST00000461437 UBAC1Q9BSL1 405 aa18.15■□□□□ 0.5
NUP50-213ENST00000461437 TSEN34Q9BSV6 310 aaKnown RBP18.15■□□□□ 0.5
NUP50-213ENST00000461437 GNEQ9Y223 722 aaKnown RBP18.15■□□□□ 0.5
NUP50-213ENST00000461437 KIAA1217Q5T5P2 1943 aa18.15■□□□□ 0.5
NUP50-213ENST00000461437 MOXD2PA6NHM9 499 aa18.14■□□□□ 0.49
NUP50-213ENST00000461437 DYNC1LI2O43237 492 aaPredicted RBP18.14■□□□□ 0.49
NUP50-213ENST00000461437 CST5P28325 142 aaPredicted RBP18.14■□□□□ 0.49
NUP50-213ENST00000461437 RPS6P62753 249 aaKnown RBP18.14■□□□□ 0.49
NUP50-213ENST00000461437 SHHQ15465 462 aa18.14■□□□□ 0.49
NUP50-213ENST00000461437 QRICH1Q2TAL8 776 aa18.14■□□□□ 0.49
NUP50-213ENST00000461437 IFIT1BQ5T764 474 aaKnown RBP18.14■□□□□ 0.49
NUP50-213ENST00000461437 C1orf53Q5VUE5 145 aa18.14■□□□□ 0.49
NUP50-213ENST00000461437 CXCL17Q6UXB2 119 aa18.14■□□□□ 0.49
NUP50-213ENST00000461437 KIAA1211Q6ZU35 1233 aa18.14■□□□□ 0.49
NUP50-213ENST00000461437 RUFY2Q8WXA3 655 aa18.14■□□□□ 0.49
NUP50-213ENST00000461437 CNNM2Q9H8M5 875 aa18.14■□□□□ 0.49
NUP50-213ENST00000461437 SPC25Q9HBM1 224 aa18.14■□□□□ 0.49
NUP50-213ENST00000461437 WDR19Q8NEZ3 1342 aa18.14■□□□□ 0.49
NUP50-213ENST00000461437 MYH7BA7E2Y1 1941 aa18.13■□□□□ 0.49
NUP50-213ENST00000461437 PARP1P09874 1014 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms