RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 MKL1Q969V6 931 aa14.67□□□□□ -0.06
HDAC4-207ENST00000461113 SNX27Q96L92 541 aa14.67□□□□□ -0.06
HDAC4-207ENST00000461113 TOX2Q96NM4 488 aa14.67□□□□□ -0.06
HDAC4-207ENST00000461113 ZSCAN10Q96SZ4 725 aaPredicted RBP14.67□□□□□ -0.06
HDAC4-207ENST00000461113 MOV10L1Q9BXT6 1211 aaKnown RBP14.67□□□□□ -0.06
HDAC4-207ENST00000461113 TANGO6Q9C0B7 1094 aa14.67□□□□□ -0.06
HDAC4-207ENST00000461113 ZSWIM5Q9P217 1185 aa14.67□□□□□ -0.06
HDAC4-207ENST00000461113 XIRP2A4UGR9 3374 aa14.67□□□□□ -0.06
HDAC4-207ENST00000461113 SIPA1L1O43166 1804 aa14.66□□□□□ -0.06
HDAC4-207ENST00000461113 F5H6K3 240 aa14.66□□□□□ -0.06
HDAC4-207ENST00000461113 IFIT3O14879 490 aaKnown RBP14.66□□□□□ -0.06
HDAC4-207ENST00000461113 ACRP10323 421 aa14.66□□□□□ -0.06
HDAC4-207ENST00000461113 MCM5P33992 734 aa14.66□□□□□ -0.06
HDAC4-207ENST00000461113 KLRC3Q07444 240 aa14.66□□□□□ -0.06
HDAC4-207ENST00000461113 SKIV2LQ15477 1246 aaKnown RBP14.66□□□□□ -0.06
HDAC4-207ENST00000461113 SLFN13Q68D06 897 aa14.66□□□□□ -0.06
HDAC4-207ENST00000461113 CCDC174Q6PII3 467 aa14.66□□□□□ -0.06
HDAC4-207ENST00000461113 ZNF365Q70YC5 407 aa14.66□□□□□ -0.06
HDAC4-207ENST00000461113 SPICE1Q8N0Z3 855 aa14.66□□□□□ -0.06
HDAC4-207ENST00000461113 RPAP3Q9H6T3 665 aaPredicted RBP14.66□□□□□ -0.06
HDAC4-207ENST00000461113 KAT14Q9H8E8 782 aa14.66□□□□□ -0.06
HDAC4-207ENST00000461113 SLC28A3Q9HAS3 691 aa14.66□□□□□ -0.06
HDAC4-207ENST00000461113 SLC5A4Q9NY91 659 aa14.66□□□□□ -0.06
HDAC4-207ENST00000461113 HOXC10Q9NYD6 342 aa14.66□□□□□ -0.06
HDAC4-207ENST00000461113 CTDP1Q9Y5B0 961 aaPredicted RBP14.66□□□□□ -0.06
HDAC4-207ENST00000461113 GPR37L1O60883 481 aa14.65□□□□□ -0.06
HDAC4-207ENST00000461113 CSF2RAP15509 400 aa14.65□□□□□ -0.06
HDAC4-207ENST00000461113 ERCC3P19447 782 aa14.65□□□□□ -0.06
HDAC4-207ENST00000461113 PSMA5P28066 241 aa14.65□□□□□ -0.06
HDAC4-207ENST00000461113 FGD1P98174 961 aa14.65□□□□□ -0.06
HDAC4-207ENST00000461113 IFIT1BQ5T764 474 aaKnown RBP14.65□□□□□ -0.06
HDAC4-207ENST00000461113 SIAH1Q8IUQ4 282 aa14.65□□□□□ -0.06
HDAC4-207ENST00000461113 LRRC47Q8N1G4 583 aaKnown RBP14.65□□□□□ -0.06
HDAC4-207ENST00000461113 GMCL1P1Q8NEA9 526 aa14.65□□□□□ -0.06
HDAC4-207ENST00000461113 MAML3Q96JK9 1138 aa14.65□□□□□ -0.06
HDAC4-207ENST00000461113 NEK1Q96PY6 1258 aa14.65□□□□□ -0.06
HDAC4-207ENST00000461113 ZKSCAN3Q9BRR0 538 aa14.65□□□□□ -0.06
HDAC4-207ENST00000461113 UPF2Q9HAU5 1272 aaKnown RBP14.65□□□□□ -0.06
HDAC4-207ENST00000461113 C11orf16Q9NQ32 467 aa14.65□□□□□ -0.06
HDAC4-207ENST00000461113 IL17RBQ9NRM6 502 aa14.65□□□□□ -0.06
HDAC4-207ENST00000461113 TBX21Q9UL17 535 aa14.65□□□□□ -0.06
HDAC4-207ENST00000461113 YBX2Q9Y2T7 364 aaKnown RBP14.65□□□□□ -0.06
HDAC4-207ENST00000461113 NMT2O60551 498 aa14.64□□□□□ -0.07
HDAC4-207ENST00000461113 FLOT1O75955 427 aa14.64□□□□□ -0.07
HDAC4-207ENST00000461113 HSPA4P34932 840 aa14.64□□□□□ -0.07
HDAC4-207ENST00000461113 SLC1A4P43007 532 aa14.64□□□□□ -0.07
HDAC4-207ENST00000461113 IKQ13123 557 aaPredicted RBP14.64□□□□□ -0.07
HDAC4-207ENST00000461113 COG2Q14746 738 aa14.64□□□□□ -0.07
HDAC4-207ENST00000461113 WTAPQ15007 396 aa14.64□□□□□ -0.07
HDAC4-207ENST00000461113 TSGA10IPQ3SY00 556 aa14.64□□□□□ -0.07
HDAC4-207ENST00000461113 TMTC2Q8N394 836 aa14.64□□□□□ -0.07
HDAC4-207ENST00000461113 KHSRPQ92945 711 aaKnown RBP eCLIP14.64□□□□□ -0.071e-7■■■■■ 27
HDAC4-207ENST00000461113 MTA3Q9BTC8 594 aa14.64□□□□□ -0.07
HDAC4-207ENST00000461113 USP26Q9BXU7 913 aa14.64□□□□□ -0.07
HDAC4-207ENST00000461113 SPATC1LQ9H0A9 340 aa14.64□□□□□ -0.07
HDAC4-207ENST00000461113 STARD7Q9NQZ5 370 aa14.64□□□□□ -0.07
HDAC4-207ENST00000461113 MTMR7Q9Y216 660 aa14.64□□□□□ -0.07
HDAC4-207ENST00000461113 TNKSO95271 1327 aa14.64□□□□□ -0.07
HDAC4-207ENST00000461113 NDUFB10O96000 172 aa14.63□□□□□ -0.07
HDAC4-207ENST00000461113 BMP3P12645 472 aa14.63□□□□□ -0.07
HDAC4-207ENST00000461113 ACLYP53396 1101 aa14.63□□□□□ -0.07
HDAC4-207ENST00000461113 CCDC96Q2M329 555 aa14.63□□□□□ -0.07
HDAC4-207ENST00000461113 TMEM67Q5HYA8 995 aa14.63□□□□□ -0.07
HDAC4-207ENST00000461113 PSRC1Q6PGN9 363 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-207ENST00000461113 SAMD1Q6SPF0 538 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-207ENST00000461113 NFXL1Q6ZNB6 911 aa14.63□□□□□ -0.07
HDAC4-207ENST00000461113 TMEM199Q8N511 208 aa14.63□□□□□ -0.07
HDAC4-207ENST00000461113 SHCBP1Q8NEM2 672 aa14.63□□□□□ -0.07
HDAC4-207ENST00000461113 CHURC1Q8WUH1 139 aa14.63□□□□□ -0.07
HDAC4-207ENST00000461113 DCAF4Q8WV16 495 aa14.63□□□□□ -0.07
HDAC4-207ENST00000461113 HERVK_113Q902F9 699 aa14.63□□□□□ -0.07
HDAC4-207ENST00000461113 LENG1Q96BZ8 264 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-207ENST00000461113 TMEM87BQ96K49 555 aa14.63□□□□□ -0.07
HDAC4-207ENST00000461113 TMEM47Q9BQJ4 181 aa14.63□□□□□ -0.07
HDAC4-207ENST00000461113 FEM1BQ9UK73 627 aa14.63□□□□□ -0.07
HDAC4-207ENST00000461113 PRC1O43663 620 aa14.62□□□□□ -0.07
HDAC4-207ENST00000461113 TAL1P17542 331 aaPredicted RBP14.62□□□□□ -0.07
HDAC4-207ENST00000461113 NOVP48745 357 aa14.62□□□□□ -0.07
HDAC4-207ENST00000461113 MRE11P49959 708 aa14.62□□□□□ -0.07
HDAC4-207ENST00000461113 FAM83BQ5T0W9 1011 aa14.62□□□□□ -0.07
HDAC4-207ENST00000461113 RCSD1Q6JBY9 416 aa14.62□□□□□ -0.07
HDAC4-207ENST00000461113 BLOC1S2Q6QNY1 142 aa14.62□□□□□ -0.07
HDAC4-207ENST00000461113 SYNE3Q6ZMZ3 975 aa14.62□□□□□ -0.07
HDAC4-207ENST00000461113 FAM160B2Q86V87 743 aa14.62□□□□□ -0.07
HDAC4-207ENST00000461113 MB21D1Q8N884 522 aa14.62□□□□□ -0.07
HDAC4-207ENST00000461113 NUP133Q8WUM0 1156 aa14.62□□□□□ -0.07
HDAC4-207ENST00000461113 ANKS1AQ92625 1134 aa14.62□□□□□ -0.07
HDAC4-207ENST00000461113 GMCL1Q96IK5 515 aa14.62□□□□□ -0.07
HDAC4-207ENST00000461113 NRBP1Q9UHY1 535 aa14.62□□□□□ -0.07
HDAC4-207ENST00000461113 CCDC69A6NI79 296 aa14.61□□□□□ -0.07
HDAC4-207ENST00000461113 TLL1O43897 1013 aa14.61□□□□□ -0.07
HDAC4-207ENST00000461113 ADAMTS4O75173 837 aa14.61□□□□□ -0.07
HDAC4-207ENST00000461113 PLS1Q14651 629 aa14.61□□□□□ -0.07
HDAC4-207ENST00000461113 STOX1Q6ZVD7 989 aa14.61□□□□□ -0.07
HDAC4-207ENST00000461113 CYB5R4Q7L1T6 521 aa14.61□□□□□ -0.07
HDAC4-207ENST00000461113 DHX32Q7L7V1 743 aaKnown RBP14.61□□□□□ -0.07
HDAC4-207ENST00000461113 CATIPQ7Z7H3 387 aa14.61□□□□□ -0.07
HDAC4-207ENST00000461113 NCAPG2Q86XI2 1143 aa14.61□□□□□ -0.07
HDAC4-207ENST00000461113 MB21D2Q8IYB1 491 aaPredicted RBP14.61□□□□□ -0.07
HDAC4-207ENST00000461113 ABRAQ8N0Z2 381 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms