RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 TRERF1Q96PN7 1200 aa15.45■□□□□ 0.06
RAB11FIP3-207ENST00000461009 ABHD16BQ9H3Z7 469 aa15.45■□□□□ 0.06
RAB11FIP3-207ENST00000461009 GPCPD1Q9NPB8 672 aa15.45■□□□□ 0.06
RAB11FIP3-207ENST00000461009 RNF146Q9NTX7 359 aa15.45■□□□□ 0.06
RAB11FIP3-207ENST00000461009 PRR12Q9ULL5 1215 aa15.45■□□□□ 0.06
RAB11FIP3-207ENST00000461009 ATP11BQ9Y2G3 1177 aa15.45■□□□□ 0.06
RAB11FIP3-207ENST00000461009 PLXNA1Q9UIW2 1896 aa15.45■□□□□ 0.06
RAB11FIP3-207ENST00000461009 ALPK3Q96L96 1907 aa15.45■□□□□ 0.06
RAB11FIP3-207ENST00000461009 ASB14A6NK59 587 aa15.44■□□□□ 0.06
RAB11FIP3-207ENST00000461009 ZNF865P0CJ78 1059 aaPredicted RBP15.44■□□□□ 0.06
RAB11FIP3-207ENST00000461009 SNHG28P0DPA3 235 aa15.44■□□□□ 0.06
RAB11FIP3-207ENST00000461009 ADCYAP1R1P41586 468 aa15.44■□□□□ 0.06
RAB11FIP3-207ENST00000461009 RTP1P59025 263 aa15.44■□□□□ 0.06
RAB11FIP3-207ENST00000461009 ACVR2BQ13705 512 aa15.44■□□□□ 0.06
RAB11FIP3-207ENST00000461009 ASPRV1Q53RT3 343 aa15.44■□□□□ 0.06
RAB11FIP3-207ENST00000461009 BTNL9Q6UXG8 535 aa15.44■□□□□ 0.06
RAB11FIP3-207ENST00000461009 CHST3Q7LGC8 479 aa15.44■□□□□ 0.06
RAB11FIP3-207ENST00000461009 IGDCC4Q8TDY8 1250 aa15.44■□□□□ 0.06
RAB11FIP3-207ENST00000461009 NUP133Q8WUM0 1156 aa15.44■□□□□ 0.06
RAB11FIP3-207ENST00000461009 KCNB2Q92953 911 aa15.44■□□□□ 0.06
RAB11FIP3-207ENST00000461009 AGBL1Q96MI9 1066 aa15.44■□□□□ 0.06
RAB11FIP3-207ENST00000461009 CCPG1Q9ULG6 757 aa15.44■□□□□ 0.06
RAB11FIP3-207ENST00000461009 FRMPD2Q68DX3 1309 aaPredicted RBP15.43■□□□□ 0.06
RAB11FIP3-207ENST00000461009 PGK1P00558 417 aa15.43■□□□□ 0.06
RAB11FIP3-207ENST00000461009 PARP1P09874 1014 aaKnown RBP15.43■□□□□ 0.06
RAB11FIP3-207ENST00000461009 TAL1P17542 331 aaPredicted RBP15.43■□□□□ 0.06
RAB11FIP3-207ENST00000461009 PSMA5P28066 241 aa15.43■□□□□ 0.06
RAB11FIP3-207ENST00000461009 ZNF543Q08ER8 600 aa15.43■□□□□ 0.06
RAB11FIP3-207ENST00000461009 SYDE2Q5VT97 1194 aa15.43■□□□□ 0.06
RAB11FIP3-207ENST00000461009 NFXL1Q6ZNB6 911 aa15.43■□□□□ 0.06
RAB11FIP3-207ENST00000461009 DHX32Q7L7V1 743 aaKnown RBP15.43■□□□□ 0.06
RAB11FIP3-207ENST00000461009 CATIPQ7Z7H3 387 aa15.43■□□□□ 0.06
RAB11FIP3-207ENST00000461009 RASEFQ8IZ41 740 aa15.43■□□□□ 0.06
RAB11FIP3-207ENST00000461009 TDHQ8IZJ6 230 aa15.43■□□□□ 0.06
RAB11FIP3-207ENST00000461009 FERMT2Q96AC1 680 aa15.43■□□□□ 0.06
RAB11FIP3-207ENST00000461009 TSEN34Q9BSV6 310 aaKnown RBP15.43■□□□□ 0.06
RAB11FIP3-207ENST00000461009 USP26Q9BXU7 913 aa15.43■□□□□ 0.06
RAB11FIP3-207ENST00000461009 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.43■□□□□ 0.06
RAB11FIP3-207ENST00000461009 PHF24Q9UPV7 400 aa15.43■□□□□ 0.06
RAB11FIP3-207ENST00000461009 WDR19Q8NEZ3 1342 aa15.43■□□□□ 0.06
RAB11FIP3-207ENST00000461009 CCDC69A6NI79 296 aa15.42■□□□□ 0.06
RAB11FIP3-207ENST00000461009 DUSP11O75319 330 aaKnown RBP15.42■□□□□ 0.06
RAB11FIP3-207ENST00000461009 SNAI1O95863 264 aaPredicted RBP15.42■□□□□ 0.06
RAB11FIP3-207ENST00000461009 ICAM1P05362 532 aa15.42■□□□□ 0.06
RAB11FIP3-207ENST00000461009 ANTXR2P58335 489 aa15.42■□□□□ 0.06
RAB11FIP3-207ENST00000461009 MDM2Q00987 491 aaPredicted RBP15.42■□□□□ 0.06
RAB11FIP3-207ENST00000461009 C1orf53Q5VUE5 145 aa15.42■□□□□ 0.06
RAB11FIP3-207ENST00000461009 TTBK2Q6IQ55 1244 aa15.42■□□□□ 0.06
RAB11FIP3-207ENST00000461009 ARMCX2Q7L311 632 aa15.42■□□□□ 0.06
RAB11FIP3-207ENST00000461009 PCSK9Q8NBP7 692 aaKnown RBP15.42■□□□□ 0.06
RAB11FIP3-207ENST00000461009 PRDM5Q9NQX1 630 aaPredicted RBP15.42■□□□□ 0.06
RAB11FIP3-207ENST00000461009 ZNF536O15090 1300 aa15.42■□□□□ 0.06
RAB11FIP3-207ENST00000461009 MOXD2PA6NHM9 499 aa15.41■□□□□ 0.06
RAB11FIP3-207ENST00000461009 SLC16A2P36021 539 aa15.41■□□□□ 0.06
RAB11FIP3-207ENST00000461009 LIFRP42702 1097 aa15.41■□□□□ 0.06
RAB11FIP3-207ENST00000461009 SYNE3Q6ZMZ3 975 aa15.41■□□□□ 0.06
RAB11FIP3-207ENST00000461009 NOL8Q76FK4 1167 aaKnown RBP15.41■□□□□ 0.06
RAB11FIP3-207ENST00000461009 CCDC144CPQ8IYA2 1237 aa15.41■□□□□ 0.06
RAB11FIP3-207ENST00000461009 MPHOSPH6Q99547 160 aaKnown RBP15.41■□□□□ 0.06
RAB11FIP3-207ENST00000461009 RANBP17Q9H2T7 1088 aaKnown RBP15.41■□□□□ 0.06
RAB11FIP3-207ENST00000461009 A1CFQ9NQ94 594 aaKnown RBP15.41■□□□□ 0.06
RAB11FIP3-207ENST00000461009 SNX14Q9Y5W7 946 aa15.41■□□□□ 0.06
RAB11FIP3-207ENST00000461009 TRIOBPQ9H2D6 2365 aa15.4■□□□□ 0.06
RAB11FIP3-207ENST00000461009 GOLGA8HP0CJ92 632 aa15.4■□□□□ 0.06
RAB11FIP3-207ENST00000461009 SNAP25P60880 206 aa15.4■□□□□ 0.06
RAB11FIP3-207ENST00000461009 FGD1P98174 961 aa15.4■□□□□ 0.06
RAB11FIP3-207ENST00000461009 EXOSC10Q01780 885 aaKnown RBP15.4■□□□□ 0.06
RAB11FIP3-207ENST00000461009 SNX17Q15036 470 aa15.4■□□□□ 0.06
RAB11FIP3-207ENST00000461009 ADCK5Q3MIX3 580 aa15.4■□□□□ 0.06
RAB11FIP3-207ENST00000461009 CCDC144BQ3MJ40 725 aa15.4■□□□□ 0.06
RAB11FIP3-207ENST00000461009 TRIM60Q495X7 471 aa15.4■□□□□ 0.06
RAB11FIP3-207ENST00000461009 BLOC1S2Q6QNY1 142 aa15.4■□□□□ 0.06
RAB11FIP3-207ENST00000461009 NSMFQ6X4W1 530 aa15.4■□□□□ 0.06
RAB11FIP3-207ENST00000461009 FAM133AQ8N9E0 248 aa15.4■□□□□ 0.06
RAB11FIP3-207ENST00000461009 VTI1AQ96AJ9 217 aa15.4■□□□□ 0.06
RAB11FIP3-207ENST00000461009 JAKMIP1Q96N16 626 aaKnown RBP15.4■□□□□ 0.06
RAB11FIP3-207ENST00000461009 MAP3K14Q99558 947 aa15.4■□□□□ 0.06
RAB11FIP3-207ENST00000461009 LY9Q9HBG7 655 aa15.4■□□□□ 0.06
RAB11FIP3-207ENST00000461009 STARD7Q9NQZ5 370 aa15.4■□□□□ 0.06
RAB11FIP3-207ENST00000461009 ADD3Q9UEY8 706 aaKnown RBP15.4■□□□□ 0.06
RAB11FIP3-207ENST00000461009 GTF3C3Q9Y5Q9 886 aa15.4■□□□□ 0.06
RAB11FIP3-207ENST00000461009 A0A1W2PQ45 241 aaPredicted RBP15.39■□□□□ 0.05
RAB11FIP3-207ENST00000461009 A0A1W2PQY0 241 aa15.39■□□□□ 0.05
RAB11FIP3-207ENST00000461009 KLRF2D3W0D1 207 aa15.39■□□□□ 0.05
RAB11FIP3-207ENST00000461009 SH2B2O14492 632 aaPredicted RBP15.39■□□□□ 0.05
RAB11FIP3-207ENST00000461009 DHX16O60231 1041 aaKnown RBP15.39■□□□□ 0.05
RAB11FIP3-207ENST00000461009 DDAH1O94760 285 aa15.39■□□□□ 0.05
RAB11FIP3-207ENST00000461009 C6orf222P0C671 652 aaPredicted RBP15.39■□□□□ 0.05
RAB11FIP3-207ENST00000461009 CALM1P0DP23 149 aa15.39■□□□□ 0.05
RAB11FIP3-207ENST00000461009 CALM2P0DP24 149 aa15.39■□□□□ 0.05
RAB11FIP3-207ENST00000461009 CALM3P0DP25 149 aa15.39■□□□□ 0.05
RAB11FIP3-207ENST00000461009 KIF5BP33176 963 aa15.39■□□□□ 0.05
RAB11FIP3-207ENST00000461009 ACLYP53396 1101 aa15.39■□□□□ 0.05
RAB11FIP3-207ENST00000461009 CNTN2Q02246 1040 aa15.39■□□□□ 0.05
RAB11FIP3-207ENST00000461009 GRM4Q14833 912 aa15.39■□□□□ 0.05
RAB11FIP3-207ENST00000461009 LRIT3Q3SXY7 679 aa15.39■□□□□ 0.05
RAB11FIP3-207ENST00000461009 GPR153Q6NV75 609 aa15.39■□□□□ 0.05
RAB11FIP3-207ENST00000461009 RASGRP2Q7LDG7 609 aa15.39■□□□□ 0.05
RAB11FIP3-207ENST00000461009 GLT1D1Q96MS3 346 aa15.39■□□□□ 0.05
RAB11FIP3-207ENST00000461009 UBA5Q9GZZ9 404 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms