RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 ESR2Q92731 530 aa26.81■■□□□ 1.88
PTPN4-207ENST00000460162 BADQ92934 168 aa26.81■■□□□ 1.88
PTPN4-207ENST00000460162 TRIM43Q96BQ3 446 aaPredicted RBP26.81■■□□□ 1.88
PTPN4-207ENST00000460162 NEDD4P46934 1319 aa26.81■■□□□ 1.88
PTPN4-207ENST00000460162 PQBP1O60828 265 aaKnown RBP26.8■■□□□ 1.88
PTPN4-207ENST00000460162 SLC16A2P36021 539 aa26.8■■□□□ 1.88
PTPN4-207ENST00000460162 TTBK2Q6IQ55 1244 aa26.8■■□□□ 1.88
PTPN4-207ENST00000460162 CWC27Q6UX04 472 aaKnown RBP26.8■■□□□ 1.88
PTPN4-207ENST00000460162 GLT1D1Q96MS3 346 aa26.8■■□□□ 1.88
PTPN4-207ENST00000460162 TOX2Q96NM4 488 aa26.8■■□□□ 1.88
PTPN4-207ENST00000460162 PNMA2Q9UL42 364 aa26.8■■□□□ 1.88
PTPN4-207ENST00000460162 ASTN1O14525 1302 aa26.8■■□□□ 1.88
PTPN4-207ENST00000460162 ELP1O95163 1332 aa26.8■■□□□ 1.88
PTPN4-207ENST00000460162 FRMPD2Q68DX3 1309 aaPredicted RBP26.8■■□□□ 1.88
PTPN4-207ENST00000460162 ZNF213O14771 459 aa26.79■■□□□ 1.88
PTPN4-207ENST00000460162 KIAA0355O15063 1070 aa26.79■■□□□ 1.88
PTPN4-207ENST00000460162 SNHG28P0DPA3 235 aa26.79■■□□□ 1.88
PTPN4-207ENST00000460162 NKX3-2P78367 333 aa26.79■■□□□ 1.88
PTPN4-207ENST00000460162 MROH7Q68CQ1 1323 aa26.79■■□□□ 1.88
PTPN4-207ENST00000460162 LAMA2P24043 3122 aaKnown RBP26.79■■□□□ 1.88
PTPN4-207ENST00000460162 COL6A3P12111 3177 aa26.78■■□□□ 1.88
PTPN4-207ENST00000460162 ZNF543Q08ER8 600 aa26.78■■□□□ 1.88
PTPN4-207ENST00000460162 NSMFQ6X4W1 530 aa26.78■■□□□ 1.88
PTPN4-207ENST00000460162 Q7L0L9 218 aa26.78■■□□□ 1.88
PTPN4-207ENST00000460162 ASGR1P07306 291 aa26.77■■□□□ 1.88
PTPN4-207ENST00000460162 TNFAIP2Q03169 654 aa26.77■■□□□ 1.88
PTPN4-207ENST00000460162 DSCC1Q9BVC3 393 aa26.77■■□□□ 1.88
PTPN4-207ENST00000460162 GPCPD1Q9NPB8 672 aa26.77■■□□□ 1.88
PTPN4-207ENST00000460162 WDR19Q8NEZ3 1342 aa26.76■■□□□ 1.87
PTPN4-207ENST00000460162 DCDC2CA8MYV0 355 aa26.76■■□□□ 1.87
PTPN4-207ENST00000460162 DGKHQ86XP1 1220 aa26.76■■□□□ 1.87
PTPN4-207ENST00000460162 MORC4Q8TE76 937 aa26.76■■□□□ 1.87
PTPN4-207ENST00000460162 LOC102724159A0A0B4J2E5 919 aa26.75■■□□□ 1.87
PTPN4-207ENST00000460162 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.75■■□□□ 1.87
PTPN4-207ENST00000460162 CTAGE5O15320 804 aa26.75■■□□□ 1.87
PTPN4-207ENST00000460162 RAG1P15918 1043 aa26.75■■□□□ 1.87
PTPN4-207ENST00000460162 ITGB8P26012 769 aa26.75■■□□□ 1.87
PTPN4-207ENST00000460162 IRX5P78411 483 aaPredicted RBP26.75■■□□□ 1.87
PTPN4-207ENST00000460162 FAAP100Q0VG06 881 aa26.75■■□□□ 1.87
PTPN4-207ENST00000460162 PWP2Q15269 919 aaKnown RBP26.75■■□□□ 1.87
PTPN4-207ENST00000460162 SHHQ15465 462 aa26.75■■□□□ 1.87
PTPN4-207ENST00000460162 CCDC178Q5BJE1 867 aa26.75■■□□□ 1.87
PTPN4-207ENST00000460162 GNASQ5JWF2 1037 aa26.75■■□□□ 1.87
PTPN4-207ENST00000460162 C9orf50Q5SZB4 431 aa26.75■■□□□ 1.87
PTPN4-207ENST00000460162 GPATCH4Q5T3I0 446 aaKnown RBP26.75■■□□□ 1.87
PTPN4-207ENST00000460162 FAM109BQ6ICB4 259 aaPredicted RBP26.75■■□□□ 1.87
PTPN4-207ENST00000460162 TLK2Q86UE8 772 aa26.75■■□□□ 1.87
PTPN4-207ENST00000460162 IQCA1Q86XH1 822 aa26.75■■□□□ 1.87
PTPN4-207ENST00000460162 TMEM39AQ9NV64 488 aa26.75■■□□□ 1.87
PTPN4-207ENST00000460162 MTMR10Q9NXD2 777 aa26.75■■□□□ 1.87
PTPN4-207ENST00000460162 ADD3Q9UEY8 706 aaKnown RBP26.75■■□□□ 1.87
PTPN4-207ENST00000460162 GNEQ9Y223 722 aaKnown RBP26.75■■□□□ 1.87
PTPN4-207ENST00000460162 A0A0U1RQG5 324 aaPredicted RBP26.74■■□□□ 1.87
PTPN4-207ENST00000460162 NFIBO00712 420 aa26.74■■□□□ 1.87
PTPN4-207ENST00000460162 VTA1Q9NP79 307 aa26.74■■□□□ 1.87
PTPN4-207ENST00000460162 IMMTQ16891 758 aaKnown RBP26.73■■□□□ 1.87
PTPN4-207ENST00000460162 NOL8Q76FK4 1167 aaKnown RBP26.73■■□□□ 1.87
PTPN4-207ENST00000460162 FBXO16Q8IX29 292 aaPredicted RBP26.73■■□□□ 1.87
PTPN4-207ENST00000460162 ZKSCAN3Q9BRR0 538 aa26.73■■□□□ 1.87
PTPN4-207ENST00000460162 TBX21Q9UL17 535 aa26.73■■□□□ 1.87
PTPN4-207ENST00000460162 KDM4AO75164 1064 aa26.72■■□□□ 1.87
PTPN4-207ENST00000460162 CDK7P50613 346 aa26.72■■□□□ 1.87
PTPN4-207ENST00000460162 ALDH5A1P51649 535 aaPredicted RBP26.72■■□□□ 1.87
PTPN4-207ENST00000460162 BAATQ14032 418 aaPredicted RBP26.72■■□□□ 1.87
PTPN4-207ENST00000460162 CTNNA3Q9UI47 895 aa26.72■■□□□ 1.87
PTPN4-207ENST00000460162 STXBP5LQ9Y2K9 1186 aa26.72■■□□□ 1.87
PTPN4-207ENST00000460162 SUPT16HQ9Y5B9 1047 aaKnown RBP26.72■■□□□ 1.87
PTPN4-207ENST00000460162 ARVCFO00192 962 aa26.71■■□□□ 1.87
PTPN4-207ENST00000460162 FPGSQ05932 587 aa26.71■■□□□ 1.87
PTPN4-207ENST00000460162 IQSEC1Q6DN90 963 aa26.71■■□□□ 1.87
PTPN4-207ENST00000460162 TAPT1Q6NXT6 567 aa26.71■■□□□ 1.87
PTPN4-207ENST00000460162 PNMA1Q8ND90 353 aa26.71■■□□□ 1.87
PTPN4-207ENST00000460162 CLEC4DQ8WXI8 215 aa26.71■■□□□ 1.87
PTPN4-207ENST00000460162 Q9Y3F1 56 aa26.71■■□□□ 1.87
PTPN4-207ENST00000460162 DDX49Q9Y6V7 483 aaKnown RBP26.71■■□□□ 1.87
PTPN4-207ENST00000460162 RAD50Q92878 1312 aa26.7■■□□□ 1.87
PTPN4-207ENST00000460162 PTPDC1A2A3K4 754 aa26.7■■□□□ 1.86
PTPN4-207ENST00000460162 B4E1Z4 1266 aa26.7■■□□□ 1.86
PTPN4-207ENST00000460162 CABYRO75952 493 aa26.7■■□□□ 1.86
PTPN4-207ENST00000460162 SMPD1P17405 629 aa26.7■■□□□ 1.86
PTPN4-207ENST00000460162 BEX3Q00994 111 aa26.7■■□□□ 1.86
PTPN4-207ENST00000460162 FSCN1Q16658 493 aaKnown RBP26.7■■□□□ 1.86
PTPN4-207ENST00000460162 SLC30A10Q6XR72 485 aa26.7■■□□□ 1.86
PTPN4-207ENST00000460162 EEPD1Q7L9B9 569 aa26.7■■□□□ 1.86
PTPN4-207ENST00000460162 ANKS1AQ92625 1134 aa26.7■■□□□ 1.86
PTPN4-207ENST00000460162 VTI1AQ96AJ9 217 aa26.7■■□□□ 1.86
PTPN4-207ENST00000460162 PURBQ96QR8 312 aaKnown RBP26.7■■□□□ 1.86
PTPN4-207ENST00000460162 AP5M1Q9H0R1 490 aa26.7■■□□□ 1.86
PTPN4-207ENST00000460162 TTC22Q5TAA0 569 aa26.69■■□□□ 1.86
PTPN4-207ENST00000460162 RNF207Q6ZRF8 634 aa26.69■■□□□ 1.86
PTPN4-207ENST00000460162 FAM126BQ8IXS8 530 aa26.69■■□□□ 1.86
PTPN4-207ENST00000460162 ZSCAN10Q96SZ4 725 aaPredicted RBP26.69■■□□□ 1.86
PTPN4-207ENST00000460162 KRT23Q9C075 422 aa26.69■■□□□ 1.86
PTPN4-207ENST00000460162 KAT14Q9H8E8 782 aa26.69■■□□□ 1.86
PTPN4-207ENST00000460162 CNNM2Q9H8M5 875 aa26.69■■□□□ 1.86
PTPN4-207ENST00000460162 PDGFCQ9NRA1 345 aa26.69■■□□□ 1.86
PTPN4-207ENST00000460162 MYH6P13533 1939 aa26.69■■□□□ 1.86
PTPN4-207ENST00000460162 ZEB2O60315 1214 aa26.68■■□□□ 1.86
PTPN4-207ENST00000460162 TIMP1P01033 207 aa26.68■■□□□ 1.86
PTPN4-207ENST00000460162 PDE4AP27815 886 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms