RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 VPS16Q9H269 839 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 LMCD1Q9NZU5 365 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 SAR1BQ9Y6B6 198 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 SPECC1L-ADORA2AF8WAN1 911 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 LAD1O00515 517 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 POLR2MP0CAP2 368 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 PIK3CAP42336 1068 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 MAGEA1P43355 309 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 MAP3K7CLP57077 242 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 ESRRGP62508 458 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 CABP7Q86V35 215 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 GDAP1L1Q96MZ0 367 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 C19orf44Q9H6X5 657 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 ST7Q9NRC1 585 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 NRBP2Q9NSY0 501 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 FAF1Q9UNN5 650 aaPredicted RBP9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 TMEM191BP0C7N4 346 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 NSFP46459 744 aaKnown RBP9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 CEP85Q6P2H3 762 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 RSBN1LQ6PCB5 846 aaPredicted RBP9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 ABI1Q8IZP0 508 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 METTL22Q9BUU2 404 aaPredicted RBP9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 ANO3Q9BYT9 981 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 TET3O43151 1660 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 DDX39AO00148 427 aaKnown RBP9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 TMTC4Q5T4D3 741 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 CHMP6Q96FZ7 201 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 DDX41Q9UJV9 622 aaKnown RBP9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 PHLPP2Q6ZVD8 1323 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 SERPINB6P35237 376 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 KLC3Q6P597 504 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 XAB2Q9HCS7 855 aaKnown RBP9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 MRGBPQ9NV56 204 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 MYH15Q9Y2K3 1946 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 K7ENM7 598 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 KRIT1O00522 736 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 DLGAP5Q15398 846 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 CACTINQ8WUQ7 758 aaKnown RBP9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 U2AF2P26368 475 aaKnown RBP eCLIP9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 USH1GQ495M9 461 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 PARD3BQ8TEW8 1205 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 USP6NLQ92738 828 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 STK17AQ9UEE5 414 aa9.68□□□□□ -0.86
SHROOM4-203ENST00000460112 CHMLP26374 656 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 ZNF75DP51815 510 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 IL9RQ01113 521 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 TNNI3KQ59H18 835 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 KLHL7Q8IXQ5 586 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 DHX38Q92620 1227 aaKnown RBP9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 MMS19Q96T76 1030 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 TEKT3Q9BXF9 490 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 SATB2Q9UPW6 733 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 FPGT-TNNI3KV9GXZ4 949 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 MED7O43513 233 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 NSMFQ6X4W1 530 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 MYOCDQ8IZQ8 938 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 SPATA5Q8NB90 893 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 MORC4Q8TE76 937 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 EXOC4Q96A65 974 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 HAUS4Q9H6D7 363 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 IRAK4Q9NWZ3 460 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 YEATS2Q9ULM3 1422 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 GNGT2O14610 69 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 ANXA13P27216 316 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 GPBP1Q86WP2 473 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 ZNF408Q9H9D4 720 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 KIF9Q9HAQ2 790 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 SCHIP1Q9P0W5 487 aaPredicted RBP9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 NUMA1Q14980 2115 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 MYH7P12883 1935 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 BEND3Q5T5X7 828 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 PLEKHM2Q8IWE5 1019 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 ANKRD36BP1Q96IX9 119 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 CNTRLQ7Z7A1 2325 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 hCG_1984214I3L0E3 225 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 DDX5P17844 614 aaKnown RBP9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 IDI1Q13907 227 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 TPH2Q8IWU9 490 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 NFATC2IPQ8NCF5 419 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 SPDYE1Q8NFV5 336 aaPredicted RBP9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 LRRC8CQ8TDW0 803 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 COL4A3BPQ9Y5P4 624 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 SBNO1A3KN83 1393 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 NVLO15381 856 aaKnown RBP9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 ZNF202O95125 648 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 CHEK2O96017 543 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 SNCBQ16143 134 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 ODR4Q5SWX8 454 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 SPDYE2BA6NHP3 402 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 TMCC1O94876 653 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 SPDYE6P0CI01 402 aa9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 V9GY48 417 aaPredicted RBP9.67□□□□□ -0.86
SHROOM4-203ENST00000460112 GPC4O75487 556 aa9.66□□□□□ -0.86
SHROOM4-203ENST00000460112 POLGP54098 1239 aaPredicted RBP9.66□□□□□ -0.86
SHROOM4-203ENST00000460112 BFSP1Q12934 665 aa9.66□□□□□ -0.86
SHROOM4-203ENST00000460112 LRFN2Q9ULH4 789 aa9.66□□□□□ -0.86
SHROOM4-203ENST00000460112 MRFAP1Q9Y605 127 aa9.66□□□□□ -0.86
SHROOM4-203ENST00000460112 RNMTO43148 476 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms