RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 PTPRAP18433 802 aa17.82■□□□□ 0.44
CMTM3-203ENST00000460097 MAP2K2P36507 400 aa17.82■□□□□ 0.44
CMTM3-203ENST00000460097 TXLNAP40222 546 aa17.82■□□□□ 0.44
CMTM3-203ENST00000460097 PPATQ06203 517 aa17.82■□□□□ 0.44
CMTM3-203ENST00000460097 CNKSR2Q8WXI2 1034 aa17.82■□□□□ 0.44
CMTM3-203ENST00000460097 KIFC2Q96AC6 838 aa17.82■□□□□ 0.44
CMTM3-203ENST00000460097 OTUD5Q96G74 571 aa17.82■□□□□ 0.44
CMTM3-203ENST00000460097 LRRC2Q9BYS8 371 aa17.82■□□□□ 0.44
CMTM3-203ENST00000460097 RASSF4Q9H2L5 321 aa17.82■□□□□ 0.44
CMTM3-203ENST00000460097 MKNK2Q9HBH9 465 aa17.82■□□□□ 0.44
CMTM3-203ENST00000460097 ZNF287Q9HBT7 754 aa17.82■□□□□ 0.44
CMTM3-203ENST00000460097 GINM1Q9NU53 330 aa17.82■□□□□ 0.44
CMTM3-203ENST00000460097 SERPINC1P01008 464 aa17.81■□□□□ 0.44
CMTM3-203ENST00000460097 IVLP07476 585 aa17.81■□□□□ 0.44
CMTM3-203ENST00000460097 CCT2P78371 535 aaKnown RBP17.81■□□□□ 0.44
CMTM3-203ENST00000460097 CABP5Q9NP86 173 aa17.81■□□□□ 0.44
CMTM3-203ENST00000460097 ANAPC4Q9UJX5 808 aa17.81■□□□□ 0.44
CMTM3-203ENST00000460097 OTOFQ9HC10 1997 aa17.81■□□□□ 0.44
CMTM3-203ENST00000460097 GJA5P36382 358 aa17.81■□□□□ 0.44
CMTM3-203ENST00000460097 SYKP43405 635 aa17.81■□□□□ 0.44
CMTM3-203ENST00000460097 KIF23Q02241 960 aaPredicted RBP17.81■□□□□ 0.44
CMTM3-203ENST00000460097 PDE4BQ07343 736 aa17.81■□□□□ 0.44
CMTM3-203ENST00000460097 ABCB5Q2M3G0 1257 aa17.81■□□□□ 0.44
CMTM3-203ENST00000460097 CT47A1Q5JQC4 288 aaPredicted RBP17.81■□□□□ 0.44
CMTM3-203ENST00000460097 KRBA2Q6ZNG9 492 aa17.81■□□□□ 0.44
CMTM3-203ENST00000460097 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.81■□□□□ 0.44
CMTM3-203ENST00000460097 RAB21Q9UL25 225 aa17.81■□□□□ 0.44
CMTM3-203ENST00000460097 ZHX2Q9Y6X8 837 aa17.81■□□□□ 0.44
CMTM3-203ENST00000460097 ROBO3Q96MS0 1386 aa17.8■□□□□ 0.44
CMTM3-203ENST00000460097 ZNF213O14771 459 aa17.8■□□□□ 0.44
CMTM3-203ENST00000460097 GH2P01242 217 aa17.8■□□□□ 0.44
CMTM3-203ENST00000460097 JAG1P78504 1218 aa17.8■□□□□ 0.44
CMTM3-203ENST00000460097 PPIL2Q13356 520 aa17.8■□□□□ 0.44
CMTM3-203ENST00000460097 ERCC4Q92889 916 aaPredicted RBP17.8■□□□□ 0.44
CMTM3-203ENST00000460097 CCDC17Q96LX7 622 aa17.8■□□□□ 0.44
CMTM3-203ENST00000460097 ZIC5Q96T25 663 aa17.8■□□□□ 0.44
CMTM3-203ENST00000460097 BAG1Q99933 345 aaPredicted RBP17.8■□□□□ 0.44
CMTM3-203ENST00000460097 NCOA5Q9HCD5 579 aaKnown RBP17.8■□□□□ 0.44
CMTM3-203ENST00000460097 USP17L5A8MUK1 530 aa17.79■□□□□ 0.44
CMTM3-203ENST00000460097 MPHOSPH10O00566 681 aaKnown RBP17.79■□□□□ 0.44
CMTM3-203ENST00000460097 IRF6O14896 467 aa17.79■□□□□ 0.44
CMTM3-203ENST00000460097 POLR3GO15318 223 aaPredicted RBP17.79■□□□□ 0.44
CMTM3-203ENST00000460097 ATP1A3P13637 1013 aa17.79■□□□□ 0.44
CMTM3-203ENST00000460097 CTDSPL2Q05D32 466 aa17.79■□□□□ 0.44
CMTM3-203ENST00000460097 PDE4CQ08493 712 aa17.79■□□□□ 0.44
CMTM3-203ENST00000460097 ZNF444Q8N0Y2 327 aaPredicted RBP17.79■□□□□ 0.44
CMTM3-203ENST00000460097 NEK11Q8NG66 645 aa17.79■□□□□ 0.44
CMTM3-203ENST00000460097 PARD6BQ9BYG5 372 aa17.79■□□□□ 0.44
CMTM3-203ENST00000460097 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.79■□□□□ 0.44
CMTM3-203ENST00000460097 ZBTB21Q9ULJ3 1066 aa17.79■□□□□ 0.44
CMTM3-203ENST00000460097 SEC31AO94979 1220 aaKnown RBP17.79■□□□□ 0.44
CMTM3-203ENST00000460097 ACTN2P35609 894 aa17.79■□□□□ 0.44
CMTM3-203ENST00000460097 HAND2P61296 217 aa17.79■□□□□ 0.44
CMTM3-203ENST00000460097 GNG11P61952 73 aa17.79■□□□□ 0.44
CMTM3-203ENST00000460097 SHROOM1Q2M3G4 852 aaPredicted RBP17.79■□□□□ 0.44
CMTM3-203ENST00000460097 RESP18Q5W5W9 173 aa17.79■□□□□ 0.44
CMTM3-203ENST00000460097 REM2Q8IYK8 340 aaPredicted RBP17.79■□□□□ 0.44
CMTM3-203ENST00000460097 MSANTD4Q8NCY6 345 aa17.79■□□□□ 0.44
CMTM3-203ENST00000460097 NAA15Q9BXJ9 866 aaKnown RBP17.79■□□□□ 0.44
CMTM3-203ENST00000460097 DACH1Q9UI36 760 aa17.79■□□□□ 0.44
CMTM3-203ENST00000460097 HOOK1Q9UJC3 728 aaKnown RBP17.79■□□□□ 0.44
CMTM3-203ENST00000460097 AFG3L2Q9Y4W6 797 aa17.79■□□□□ 0.44
CMTM3-203ENST00000460097 MANSC4A6NHS7 340 aaPredicted RBP17.78■□□□□ 0.44
CMTM3-203ENST00000460097 GTF2A2P52657 109 aa17.78■□□□□ 0.44
CMTM3-203ENST00000460097 INHBEP58166 350 aa17.78■□□□□ 0.44
CMTM3-203ENST00000460097 IMMTQ16891 758 aaKnown RBP17.78■□□□□ 0.44
CMTM3-203ENST00000460097 LONRF2Q1L5Z9 754 aa17.78■□□□□ 0.44
CMTM3-203ENST00000460097 CCDC84Q86UT8 332 aaPredicted RBP17.78■□□□□ 0.44
CMTM3-203ENST00000460097 CEP112Q8N8E3 955 aa17.78■□□□□ 0.44
CMTM3-203ENST00000460097 AS3MTQ9HBK9 375 aa17.78■□□□□ 0.44
CMTM3-203ENST00000460097 ADAM21Q9UKJ8 722 aa17.78■□□□□ 0.44
CMTM3-203ENST00000460097 CXCL11O14625 94 aa17.77■□□□□ 0.44
CMTM3-203ENST00000460097 CUTAO60888 179 aa17.77■□□□□ 0.44
CMTM3-203ENST00000460097 PRDM1O75626 825 aa17.77■□□□□ 0.44
CMTM3-203ENST00000460097 AKR1B1P15121 316 aa17.77■□□□□ 0.44
CMTM3-203ENST00000460097 ZNF18P17022 549 aa17.77■□□□□ 0.44
CMTM3-203ENST00000460097 RASA1P20936 1047 aa17.77■□□□□ 0.44
CMTM3-203ENST00000460097 GUCY1B3Q02153 619 aa17.77■□□□□ 0.44
CMTM3-203ENST00000460097 SNAPC2Q13487 334 aa17.77■□□□□ 0.44
CMTM3-203ENST00000460097 NT5DC1Q5TFE4 455 aa17.77■□□□□ 0.44
CMTM3-203ENST00000460097 SPECC1LQ69YQ0 1117 aa17.77■□□□□ 0.44
CMTM3-203ENST00000460097 TMEM179Q6ZVK1 233 aa17.77■□□□□ 0.44
CMTM3-203ENST00000460097 SRGAP1Q7Z6B7 1085 aa17.77■□□□□ 0.44
CMTM3-203ENST00000460097 PANX2Q96RD6 677 aa17.77■□□□□ 0.44
CMTM3-203ENST00000460097 DOCK1Q14185 1865 aa17.77■□□□□ 0.43
CMTM3-203ENST00000460097 BIN1O00499 593 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 EIF3JO75822 258 aaKnown RBP17.76■□□□□ 0.43
CMTM3-203ENST00000460097 SREBF2Q12772 1141 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 HDXQ7Z353 690 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 SRLQ86TD4 932 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 TRIML1Q8N9V2 468 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 ZNF280CQ8ND82 737 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 ENOX1Q8TC92 643 aaKnown RBP17.76■□□□□ 0.43
CMTM3-203ENST00000460097 MS4A4AQ96JQ5 239 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 WDR18Q9BV38 432 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 INCENPQ9NQS7 918 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 HPS5Q9UPZ3 1129 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 KCNH4Q9UQ05 1017 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 MYO1CO00159 1063 aa17.76■□□□□ 0.43
CMTM3-203ENST00000460097 ERLIN1O75477 346 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms