RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 PDGFCQ9NRA1 345 aa14.63□□□□□ -0.07
GPNMB-204ENST00000459927 PRR12Q9ULL5 1215 aa14.63□□□□□ -0.07
GPNMB-204ENST00000459927 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.63□□□□□ -0.07
GPNMB-204ENST00000459927 GRIN2DO15399 1336 aa14.63□□□□□ -0.07
GPNMB-204ENST00000459927 MYO9BQ13459 2157 aa14.63□□□□□ -0.07
GPNMB-204ENST00000459927 PRUNE2Q8WUY3 3088 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 CDH23Q9H251 3354 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 PLIN4Q96Q06 1357 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 NMT2O60551 498 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 CABYRO75952 493 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 VCANP13611 3396 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 SMPD1P17405 629 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 CYP2C18P33260 490 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 PBX2P40425 430 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 NOVP48745 357 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 CTDSPL2Q05D32 466 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 IKQ13123 557 aaPredicted RBP14.62□□□□□ -0.07
GPNMB-204ENST00000459927 ITGA7Q13683 1181 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 MUM1L1Q5H9M0 696 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 CCDC129Q6ZRS4 1044 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 FSD1Q9BTV5 496 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 PBX4Q9BYU1 374 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 PPP1R12CQ9BZL4 782 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 AP5M1Q9H0R1 490 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 IL23AQ9NPF7 189 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 ISY1Q9ULR0 285 aaKnown RBP14.62□□□□□ -0.07
GPNMB-204ENST00000459927 STX8Q9UNK0 236 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 Q9Y3F1 56 aa14.62□□□□□ -0.07
GPNMB-204ENST00000459927 DDX49Q9Y6V7 483 aaKnown RBP14.62□□□□□ -0.07
GPNMB-204ENST00000459927 TSPY2A6NKD2 308 aa14.61□□□□□ -0.07
GPNMB-204ENST00000459927 FOXP2O15409 715 aa14.61□□□□□ -0.07
GPNMB-204ENST00000459927 FGBP02675 491 aa14.61□□□□□ -0.07
GPNMB-204ENST00000459927 FGRP09769 529 aa14.61□□□□□ -0.07
GPNMB-204ENST00000459927 FSCN1Q16658 493 aaKnown RBP14.61□□□□□ -0.07
GPNMB-204ENST00000459927 TMEM63BQ5T3F8 832 aa14.61□□□□□ -0.07
GPNMB-204ENST00000459927 HERVK_113Q902F9 699 aa14.61□□□□□ -0.07
GPNMB-204ENST00000459927 SYMPKQ92797 1274 aaKnown RBP14.61□□□□□ -0.07
GPNMB-204ENST00000459927 PURBQ96QR8 312 aaKnown RBP14.61□□□□□ -0.07
GPNMB-204ENST00000459927 SEZ6LQ9BYH1 1024 aa14.61□□□□□ -0.07
GPNMB-204ENST00000459927 CYP39A1Q9NYL5 469 aa14.61□□□□□ -0.07
GPNMB-204ENST00000459927 ANAPC4Q9UJX5 808 aa14.61□□□□□ -0.07
GPNMB-204ENST00000459927 ZEB2O60315 1214 aa14.6□□□□□ -0.07
GPNMB-204ENST00000459927 RANBP6O60518 1105 aaKnown RBP14.6□□□□□ -0.07
GPNMB-204ENST00000459927 PTGS1P23219 599 aa14.6□□□□□ -0.07
GPNMB-204ENST00000459927 ALX1Q15699 326 aa14.6□□□□□ -0.07
GPNMB-204ENST00000459927 TTBK2Q6IQ55 1244 aa14.6□□□□□ -0.07
GPNMB-204ENST00000459927 KIAA1211Q6ZU35 1233 aa14.6□□□□□ -0.07
GPNMB-204ENST00000459927 EEPD1Q7L9B9 569 aa14.6□□□□□ -0.07
GPNMB-204ENST00000459927 MORC4Q8TE76 937 aa14.6□□□□□ -0.07
GPNMB-204ENST00000459927 MX1P20591 662 aa14.59□□□□□ -0.07
GPNMB-204ENST00000459927 BAATQ14032 418 aaPredicted RBP14.59□□□□□ -0.07
GPNMB-204ENST00000459927 VPS53Q5VIR6 699 aa14.59□□□□□ -0.07
GPNMB-204ENST00000459927 PSRC1Q6PGN9 363 aaPredicted RBP14.59□□□□□ -0.07
GPNMB-204ENST00000459927 BTNL9Q6UXG8 535 aa14.59□□□□□ -0.07
GPNMB-204ENST00000459927 TLK2Q86UE8 772 aa14.59□□□□□ -0.07
GPNMB-204ENST00000459927 USP38Q8NB14 1042 aa14.59□□□□□ -0.07
GPNMB-204ENST00000459927 TRPV6Q9H1D0 765 aa14.59□□□□□ -0.07
GPNMB-204ENST00000459927 CXXC1Q9P0U4 656 aaPredicted RBP14.59□□□□□ -0.07
GPNMB-204ENST00000459927 ORC4O43929 436 aa14.58□□□□□ -0.08
GPNMB-204ENST00000459927 FGAP02671 866 aa14.58□□□□□ -0.08
GPNMB-204ENST00000459927 ICAM1P05362 532 aa14.58□□□□□ -0.08
GPNMB-204ENST00000459927 SLC16A2P36021 539 aa14.58□□□□□ -0.08
GPNMB-204ENST00000459927 NSMFQ6X4W1 530 aa14.58□□□□□ -0.08
GPNMB-204ENST00000459927 RPUSD2Q8IZ73 545 aaKnown RBP14.58□□□□□ -0.08
GPNMB-204ENST00000459927 DCAF4Q8WV16 495 aa14.58□□□□□ -0.08
GPNMB-204ENST00000459927 RANBP17Q9H2T7 1088 aaKnown RBP14.58□□□□□ -0.08
GPNMB-204ENST00000459927 HIPK3Q9H422 1215 aa14.58□□□□□ -0.08
GPNMB-204ENST00000459927 PRDM12Q9H4Q4 367 aa14.58□□□□□ -0.08
GPNMB-204ENST00000459927 HELLSQ9NRZ9 838 aa14.58□□□□□ -0.08
GPNMB-204ENST00000459927 TCP11L1Q9NUJ3 509 aa14.58□□□□□ -0.08
GPNMB-204ENST00000459927 MSRAQ9UJ68 235 aa14.58□□□□□ -0.08
GPNMB-204ENST00000459927 CCPG1Q9ULG6 757 aa14.58□□□□□ -0.08
GPNMB-204ENST00000459927 MTMR7Q9Y216 660 aa14.58□□□□□ -0.08
GPNMB-204ENST00000459927 RBM47A0AV96 593 aaKnown RBP14.57□□□□□ -0.08
GPNMB-204ENST00000459927 B4GALT4O60513 344 aa14.57□□□□□ -0.08
GPNMB-204ENST00000459927 CCL23P55773 120 aa14.57□□□□□ -0.08
GPNMB-204ENST00000459927 PSMC6P62333 389 aa14.57□□□□□ -0.08
GPNMB-204ENST00000459927 DUSP28Q4G0W2 176 aa14.57□□□□□ -0.08
GPNMB-204ENST00000459927 AKNAD1Q5T1N1 836 aa14.57□□□□□ -0.08
GPNMB-204ENST00000459927 ANKRD45Q5TZF3 282 aa14.57□□□□□ -0.08
GPNMB-204ENST00000459927 RASGRP2Q7LDG7 609 aa14.57□□□□□ -0.08
GPNMB-204ENST00000459927 OTOP2Q7RTS6 562 aa14.57□□□□□ -0.08
GPNMB-204ENST00000459927 FBXO16Q8IX29 292 aaPredicted RBP14.57□□□□□ -0.08
GPNMB-204ENST00000459927 PPM1EQ8WY54 764 aa14.57□□□□□ -0.08
GPNMB-204ENST00000459927 EVI5LQ96CN4 794 aa14.57□□□□□ -0.08
GPNMB-204ENST00000459927 GAS2L1Q99501 681 aaPredicted RBP14.57□□□□□ -0.08
GPNMB-204ENST00000459927 TMEM47Q9BQJ4 181 aa14.57□□□□□ -0.08
GPNMB-204ENST00000459927 NOC4LQ9BVI4 516 aaKnown RBP14.57□□□□□ -0.08
GPNMB-204ENST00000459927 VTA1Q9NP79 307 aa14.57□□□□□ -0.08
GPNMB-204ENST00000459927 PRDM6Q9NQX0 595 aa14.57□□□□□ -0.08
GPNMB-204ENST00000459927 ADD3Q9UEY8 706 aaKnown RBP14.57□□□□□ -0.08
GPNMB-204ENST00000459927 UMODL1Q5DID0 1318 aa14.57□□□□□ -0.08
GPNMB-204ENST00000459927 SALL3Q9BXA9 1300 aa14.57□□□□□ -0.08
GPNMB-204ENST00000459927 TOP1P11387 765 aaKnown RBP14.56□□□□□ -0.08
GPNMB-204ENST00000459927 ADGRE1Q14246 886 aa14.56□□□□□ -0.08
GPNMB-204ENST00000459927 RAB30Q15771 203 aa14.56□□□□□ -0.08
GPNMB-204ENST00000459927 TJAP1Q5JTD0 557 aa14.56□□□□□ -0.08
GPNMB-204ENST00000459927 VWCEQ96DN2 955 aa14.56□□□□□ -0.08
GPNMB-204ENST00000459927 WDR11Q9BZH6 1224 aa14.56□□□□□ -0.08
GPNMB-204ENST00000459927 SPTBN5Q9NRC6 3674 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms