RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 TMEM232C9JQI7 657 aa14.16□□□□□ -0.14
LMCD1-206ENST00000456506 SMPD1P17405 629 aa14.16□□□□□ -0.14
LMCD1-206ENST00000456506 STAT2P52630 851 aa14.16□□□□□ -0.14
LMCD1-206ENST00000456506 TFAP4Q01664 338 aa14.16□□□□□ -0.14
LMCD1-206ENST00000456506 TNFAIP2Q03169 654 aa14.16□□□□□ -0.14
LMCD1-206ENST00000456506 MUM1L1Q5H9M0 696 aa14.16□□□□□ -0.14
LMCD1-206ENST00000456506 CXCL17Q6UXB2 119 aa14.16□□□□□ -0.14
LMCD1-206ENST00000456506 TMEM199Q8N511 208 aa14.16□□□□□ -0.14
LMCD1-206ENST00000456506 OTUD7AQ8TE49 926 aaPredicted RBP14.16□□□□□ -0.14
LMCD1-206ENST00000456506 MORC4Q8TE76 937 aa14.16□□□□□ -0.14
LMCD1-206ENST00000456506 STAG1Q8WVM7 1258 aa14.16□□□□□ -0.14
LMCD1-206ENST00000456506 HERVK_113Q902F9 699 aa14.16□□□□□ -0.14
LMCD1-206ENST00000456506 PPP1R12CQ9BZL4 782 aa14.16□□□□□ -0.14
LMCD1-206ENST00000456506 ZNF287Q9HBT7 754 aa14.16□□□□□ -0.14
LMCD1-206ENST00000456506 IL23AQ9NPF7 189 aa14.16□□□□□ -0.14
LMCD1-206ENST00000456506 HOMER2Q9NSB8 354 aa14.16□□□□□ -0.14
LMCD1-206ENST00000456506 RNF146Q9NTX7 359 aa14.16□□□□□ -0.14
LMCD1-206ENST00000456506 BDP1A6H8Y1 2624 aa14.16□□□□□ -0.14
LMCD1-206ENST00000456506 TTC41PQ6P2S7 1318 aa14.15□□□□□ -0.14
LMCD1-206ENST00000456506 TSPY3P0CV98 308 aa14.15□□□□□ -0.14
LMCD1-206ENST00000456506 TSPY8P0CW00 308 aa14.15□□□□□ -0.14
LMCD1-206ENST00000456506 PPARAQ07869 468 aa14.15□□□□□ -0.14
LMCD1-206ENST00000456506 TJAP1Q5JTD0 557 aa14.15□□□□□ -0.14
LMCD1-206ENST00000456506 ZMYM1Q5SVZ6 1142 aa14.15□□□□□ -0.14
LMCD1-206ENST00000456506 AKNAD1Q5T1N1 836 aa14.15□□□□□ -0.14
LMCD1-206ENST00000456506 PSRC1Q6PGN9 363 aaPredicted RBP14.15□□□□□ -0.14
LMCD1-206ENST00000456506 TLK2Q86UE8 772 aa14.15□□□□□ -0.14
LMCD1-206ENST00000456506 FAM160B2Q86V87 743 aa14.15□□□□□ -0.14
LMCD1-206ENST00000456506 SYMPKQ92797 1274 aaKnown RBP14.15□□□□□ -0.14
LMCD1-206ENST00000456506 WNT8AQ9H1J5 351 aa14.15□□□□□ -0.14
LMCD1-206ENST00000456506 PRDM12Q9H4Q4 367 aa14.15□□□□□ -0.14
LMCD1-206ENST00000456506 SPC25Q9HBM1 224 aa14.15□□□□□ -0.14
LMCD1-206ENST00000456506 INCENPQ9NQS7 918 aa14.15□□□□□ -0.14
LMCD1-206ENST00000456506 PDGFCQ9NRA1 345 aa14.15□□□□□ -0.14
LMCD1-206ENST00000456506 CYP39A1Q9NYL5 469 aa14.15□□□□□ -0.14
LMCD1-206ENST00000456506 NMT2O60551 498 aa14.14□□□□□ -0.15
LMCD1-206ENST00000456506 TKFCQ3LXA3 575 aa14.14□□□□□ -0.15
LMCD1-206ENST00000456506 TRERF1Q96PN7 1200 aa14.14□□□□□ -0.15
LMCD1-206ENST00000456506 PURBQ96QR8 312 aaKnown RBP14.14□□□□□ -0.15
LMCD1-206ENST00000456506 NOC4LQ9BVI4 516 aaKnown RBP14.14□□□□□ -0.15
LMCD1-206ENST00000456506 PRR12Q9ULL5 1215 aa14.14□□□□□ -0.15
LMCD1-206ENST00000456506 YBX2Q9Y2T7 364 aaKnown RBP14.14□□□□□ -0.15
LMCD1-206ENST00000456506 ASB14A6NK59 587 aa14.13□□□□□ -0.15
LMCD1-206ENST00000456506 TLR3O15455 904 aaKnown RBP14.13□□□□□ -0.15
LMCD1-206ENST00000456506 B4GALT4O60513 344 aa14.13□□□□□ -0.15
LMCD1-206ENST00000456506 CABYRO75952 493 aa14.13□□□□□ -0.15
LMCD1-206ENST00000456506 APPP05067 770 aa14.13□□□□□ -0.15
LMCD1-206ENST00000456506 MCCP23508 829 aa14.13□□□□□ -0.15
LMCD1-206ENST00000456506 SNAP25P60880 206 aa14.13□□□□□ -0.15
LMCD1-206ENST00000456506 PDE4BQ07343 736 aa14.13□□□□□ -0.15
LMCD1-206ENST00000456506 ITGA7Q13683 1181 aa14.13□□□□□ -0.15
LMCD1-206ENST00000456506 FSCN1Q16658 493 aaKnown RBP14.13□□□□□ -0.15
LMCD1-206ENST00000456506 RCSD1Q6JBY9 416 aa14.13□□□□□ -0.15
LMCD1-206ENST00000456506 CCDC174Q6PII3 467 aa14.13□□□□□ -0.15
LMCD1-206ENST00000456506 KCTD1Q719H9 257 aa14.13□□□□□ -0.15
LMCD1-206ENST00000456506 CHURC1Q8WUH1 139 aa14.13□□□□□ -0.15
LMCD1-206ENST00000456506 TRPV6Q9H1D0 765 aa14.13□□□□□ -0.15
LMCD1-206ENST00000456506 Q9Y3F1 56 aa14.13□□□□□ -0.15
LMCD1-206ENST00000456506 CTDP1Q9Y5B0 961 aaPredicted RBP14.13□□□□□ -0.15
LMCD1-206ENST00000456506 FGRP09769 529 aa14.12□□□□□ -0.15
LMCD1-206ENST00000456506 ALAS1P13196 640 aa14.12□□□□□ -0.15
LMCD1-206ENST00000456506 SLC1A4P43007 532 aa14.12□□□□□ -0.15
LMCD1-206ENST00000456506 PSMC6P62333 389 aa14.12□□□□□ -0.15
LMCD1-206ENST00000456506 IQSEC1Q6DN90 963 aa14.12□□□□□ -0.15
LMCD1-206ENST00000456506 CCDC129Q6ZRS4 1044 aa14.12□□□□□ -0.15
LMCD1-206ENST00000456506 FBXO16Q8IX29 292 aaPredicted RBP14.12□□□□□ -0.15
LMCD1-206ENST00000456506 VTI1AQ96AJ9 217 aa14.12□□□□□ -0.15
LMCD1-206ENST00000456506 CHMP4CQ96CF2 233 aa14.12□□□□□ -0.15
LMCD1-206ENST00000456506 GPATCH3Q96I76 525 aa14.12□□□□□ -0.15
LMCD1-206ENST00000456506 NACAP1Q9BZK3 213 aa14.12□□□□□ -0.15
LMCD1-206ENST00000456506 NAPBQ9H115 298 aa14.12□□□□□ -0.15
LMCD1-206ENST00000456506 RANBP17Q9H2T7 1088 aaKnown RBP14.12□□□□□ -0.15
LMCD1-206ENST00000456506 HIPK3Q9H422 1215 aa14.12□□□□□ -0.15
LMCD1-206ENST00000456506 ANAPC4Q9UJX5 808 aa14.12□□□□□ -0.15
LMCD1-206ENST00000456506 PCDHB15Q9Y5E8 787 aa14.12□□□□□ -0.15
LMCD1-206ENST00000456506 SIP14410 1827 aa14.12□□□□□ -0.15
LMCD1-206ENST00000456506 NCOR1O75376 2440 aa14.12□□□□□ -0.15
LMCD1-206ENST00000456506 RBM47A0AV96 593 aaKnown RBP14.11□□□□□ -0.15
LMCD1-206ENST00000456506 DYNC1LI2O43237 492 aaPredicted RBP14.11□□□□□ -0.15
LMCD1-206ENST00000456506 CTDSPL2Q05D32 466 aa14.11□□□□□ -0.15
LMCD1-206ENST00000456506 RAB30Q15771 203 aa14.11□□□□□ -0.15
LMCD1-206ENST00000456506 VPS53Q5VIR6 699 aa14.11□□□□□ -0.15
LMCD1-206ENST00000456506 BTNL9Q6UXG8 535 aa14.11□□□□□ -0.15
LMCD1-206ENST00000456506 ATXN2LQ8WWM7 1075 aaKnown RBP14.11□□□□□ -0.15
LMCD1-206ENST00000456506 SEZ6LQ9BYH1 1024 aa14.11□□□□□ -0.15
LMCD1-206ENST00000456506 NKX2-4Q9H2Z4 354 aa14.11□□□□□ -0.15
LMCD1-206ENST00000456506 TNFRSF10AO00220 468 aa14.1□□□□□ -0.15
LMCD1-206ENST00000456506 FGBP02675 491 aa14.1□□□□□ -0.15
LMCD1-206ENST00000456506 ICAM1P05362 532 aa14.1□□□□□ -0.15
LMCD1-206ENST00000456506 CCL23P55773 120 aa14.1□□□□□ -0.15
LMCD1-206ENST00000456506 DUSP28Q4G0W2 176 aa14.1□□□□□ -0.15
LMCD1-206ENST00000456506 TTBK2Q6IQ55 1244 aa14.1□□□□□ -0.15
LMCD1-206ENST00000456506 EEPD1Q7L9B9 569 aa14.1□□□□□ -0.15
LMCD1-206ENST00000456506 OTOP2Q7RTS6 562 aa14.1□□□□□ -0.15
LMCD1-206ENST00000456506 ASB2Q96Q27 587 aa14.1□□□□□ -0.15
LMCD1-206ENST00000456506 GAS2L1Q99501 681 aaPredicted RBP14.1□□□□□ -0.15
LMCD1-206ENST00000456506 ALDH8A1Q9H2A2 487 aaPredicted RBP14.1□□□□□ -0.15
LMCD1-206ENST00000456506 VTA1Q9NP79 307 aa14.1□□□□□ -0.15
LMCD1-206ENST00000456506 STX8Q9UNK0 236 aa14.1□□□□□ -0.15
LMCD1-206ENST00000456506 ATG2AQ2TAZ0 1938 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms