RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 PCDHA1Q9Y5I3 950 aa8.54□□□□□ -1.04
ERCC3-204ENST00000456257 MRVI1Q9Y6F6 885 aa8.54□□□□□ -1.04
ERCC3-204ENST00000456257 MYH6P13533 1939 aa8.54□□□□□ -1.04
ERCC3-204ENST00000456257 GLTPD2A6NH11 291 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 UNCXA6NJT0 531 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 WDR46O15213 610 aaKnown RBP8.53□□□□□ -1.04
ERCC3-204ENST00000456257 SLC26A4O43511 780 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 CYP3A4P08684 503 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 SLFN14P0C7P3 912 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 PTPRAP18433 802 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 INPP5BP32019 993 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 STAT2P52630 851 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 BACE1P56817 501 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 ATP2B2Q01814 1243 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 TYRO3Q06418 890 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 AP3B2Q13367 1082 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 CDC37Q16543 378 aaPredicted RBP8.53□□□□□ -1.04
ERCC3-204ENST00000456257 INF2Q27J81 1249 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 CCDC96Q2M329 555 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 LONRF3Q496Y0 759 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 DPY19L2Q6NUT2 758 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 KRBA2Q6ZNG9 492 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 USP49Q70CQ1 688 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 FBXO11Q86XK2 927 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 PRPF38AQ8NAV1 312 aaKnown RBP8.53□□□□□ -1.04
ERCC3-204ENST00000456257 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.53□□□□□ -1.04
ERCC3-204ENST00000456257 RASGRP4Q8TDF6 673 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 PIBF1Q8WXW3 757 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 CUL5Q93034 780 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 PDLIM2Q96JY6 352 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 AK8Q96MA6 479 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 NAP1L4Q99733 375 aaKnown RBP8.53□□□□□ -1.04
ERCC3-204ENST00000456257 PYM1Q9BRP8 204 aaKnown RBP8.53□□□□□ -1.04
ERCC3-204ENST00000456257 TMEM60Q9H2L4 133 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 EMILIN3Q9NT22 766 aa8.53□□□□□ -1.04
ERCC3-204ENST00000456257 POTECB2RU33 542 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 ACTN4O43707 911 aaKnown RBP8.52□□□□□ -1.05
ERCC3-204ENST00000456257 MCM7P33993 719 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 SREBF1P36956 1147 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 FXR2P51116 673 aaKnown RBP eCLIP8.52□□□□□ -1.05
ERCC3-204ENST00000456257 USP14P54578 494 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 MAP3K9P80192 1104 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 IQCB1Q15051 598 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 E2F4Q16254 413 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 CAMK4Q16566 473 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 CT47A1Q5JQC4 288 aaPredicted RBP8.52□□□□□ -1.05
ERCC3-204ENST00000456257 FAM83BQ5T0W9 1011 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 SAMD1Q6SPF0 538 aaPredicted RBP8.52□□□□□ -1.05
ERCC3-204ENST00000456257 HOMER1Q86YM7 354 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 IGSF22Q8N9C0 903 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 ZNF280CQ8ND82 737 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 TBCKQ8TEA7 893 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 NUP88Q99567 741 aaPredicted RBP8.52□□□□□ -1.05
ERCC3-204ENST00000456257 BPIFA3Q9BQP9 254 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 SDF4Q9BRK5 362 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 GLIS2Q9BZE0 524 aaPredicted RBP8.52□□□□□ -1.05
ERCC3-204ENST00000456257 FAM13BQ9NYF5 915 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 GGA3Q9NZ52 723 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 MTMR7Q9Y216 660 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 AFG3L2Q9Y4W6 797 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 MYH8P13535 1937 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 MYH4Q9Y623 1939 aa8.52□□□□□ -1.05
ERCC3-204ENST00000456257 A0A087X0B3 334 aa8.51□□□□□ -1.05
ERCC3-204ENST00000456257 ATP2A1O14983 1001 aa8.51□□□□□ -1.05
ERCC3-204ENST00000456257 TBX3O15119 743 aa8.51□□□□□ -1.05
ERCC3-204ENST00000456257 LMOD1P29536 600 aaPredicted RBP8.51□□□□□ -1.05
ERCC3-204ENST00000456257 CNNM4Q6P4Q7 775 aa8.51□□□□□ -1.05
ERCC3-204ENST00000456257 DTHD1Q6ZMT9 781 aa8.51□□□□□ -1.05
ERCC3-204ENST00000456257 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.51□□□□□ -1.05
ERCC3-204ENST00000456257 RBM46Q8TBY0 533 aaKnown RBP8.51□□□□□ -1.05
ERCC3-204ENST00000456257 FAM200AQ8TCP9 573 aa8.51□□□□□ -1.05
ERCC3-204ENST00000456257 EPSTI1Q96J88 318 aa8.51□□□□□ -1.05
ERCC3-204ENST00000456257 P2RX7Q99572 595 aaKnown RBP8.51□□□□□ -1.05
ERCC3-204ENST00000456257 AS3MTQ9HBK9 375 aa8.51□□□□□ -1.05
ERCC3-204ENST00000456257 SLC38A10Q9HBR0 1119 aa8.51□□□□□ -1.05
ERCC3-204ENST00000456257 ANO10Q9NW15 660 aa8.51□□□□□ -1.05
ERCC3-204ENST00000456257 TMEM260Q9NX78 707 aa8.51□□□□□ -1.05
ERCC3-204ENST00000456257 BIN2Q9UBW5 565 aaPredicted RBP8.51□□□□□ -1.05
ERCC3-204ENST00000456257 MRPL11Q9Y3B7 192 aaKnown RBP8.51□□□□□ -1.05
ERCC3-204ENST00000456257 SSC5DA1L4H1 1573 aa8.51□□□□□ -1.05
ERCC3-204ENST00000456257 ZNF536O15090 1300 aa8.51□□□□□ -1.05
ERCC3-204ENST00000456257 MYPNQ86TC9 1320 aa8.51□□□□□ -1.05
ERCC3-204ENST00000456257 POLR2DO15514 142 aaKnown RBP8.5□□□□□ -1.05
ERCC3-204ENST00000456257 ICAM1P05362 532 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 MYL1P05976 194 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 OR52Z1P0C646 297 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 ATP2B1P20020 1258 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 HSD17B4P51659 736 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 SPP2Q13103 211 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 Q4G0T1 1027 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 HYIQ5T013 277 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 LDLRAD1Q5T700 205 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 JAKMIP3Q5VZ66 844 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 SASS6Q6UVJ0 657 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 LDHDQ86WU2 507 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 CKAP2LQ8IYA6 745 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 SPICE1Q8N0Z3 855 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 KCTD17Q8N5Z5 321 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 TRIML1Q8N9V2 468 aa8.5□□□□□ -1.05
ERCC3-204ENST00000456257 IQUBQ8NA54 791 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms