RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 NCAM1P13591 858 aa4.26□□□□□ -1.73
LINC02540-201ENST00000455554 PRR5P85299 388 aa4.26□□□□□ -1.73
LINC02540-201ENST00000455554 AUHQ13825 339 aaKnown RBP4.26□□□□□ -1.73
LINC02540-201ENST00000455554 CPZQ66K79 652 aa4.26□□□□□ -1.73
LINC02540-201ENST00000455554 FAM161BQ96MY7 647 aa4.26□□□□□ -1.73
LINC02540-201ENST00000455554 SLC6A18Q96N87 628 aa4.26□□□□□ -1.73
LINC02540-201ENST00000455554 RBM15Q96T37 977 aaKnown RBP eCLIP4.26□□□□□ -1.73
LINC02540-201ENST00000455554 DSCC1Q9BVC3 393 aa4.26□□□□□ -1.73
LINC02540-201ENST00000455554 PDLIM7Q9NR12 457 aa4.26□□□□□ -1.73
LINC02540-201ENST00000455554 DBR1Q9UK59 544 aaKnown RBP4.26□□□□□ -1.73
LINC02540-201ENST00000455554 OVOL3O00110 214 aa4.25□□□□□ -1.73
LINC02540-201ENST00000455554 ASGR2P07307 311 aa4.25□□□□□ -1.73
LINC02540-201ENST00000455554 CWF19L1Q69YN2 538 aaKnown RBP4.25□□□□□ -1.73
LINC02540-201ENST00000455554 FBXL19Q6PCT2 694 aa4.25□□□□□ -1.73
LINC02540-201ENST00000455554 CYP2R1Q6VVX0 501 aa4.25□□□□□ -1.73
LINC02540-201ENST00000455554 B3GNT8Q7Z7M8 397 aa4.25□□□□□ -1.73
LINC02540-201ENST00000455554 TTC9BQ8N6N2 239 aa4.25□□□□□ -1.73
LINC02540-201ENST00000455554 C1QTNF3Q9BXJ4 246 aa4.25□□□□□ -1.73
LINC02540-201ENST00000455554 SLC12A9Q9BXP2 914 aa4.25□□□□□ -1.73
LINC02540-201ENST00000455554 BCAS3Q9H6U6 928 aa4.25□□□□□ -1.73
LINC02540-201ENST00000455554 EHMT1Q9H9B1 1298 aa4.25□□□□□ -1.73
LINC02540-201ENST00000455554 NME1P15531 152 aaKnown RBP4.24□□□□□ -1.73
LINC02540-201ENST00000455554 ZNF20P17024 532 aa4.24□□□□□ -1.73
LINC02540-201ENST00000455554 CORO7P57737 925 aa4.24□□□□□ -1.73
LINC02540-201ENST00000455554 ALG3Q92685 438 aa4.24□□□□□ -1.73
LINC02540-201ENST00000455554 LOXL4Q96JB6 756 aa4.24□□□□□ -1.73
LINC02540-201ENST00000455554 C8orf49Q96NF6 230 aa4.24□□□□□ -1.73
LINC02540-201ENST00000455554 SAMD11Q96NU1 681 aa4.24□□□□□ -1.73
LINC02540-201ENST00000455554 SORCS2Q96PQ0 1159 aa4.24□□□□□ -1.73
LINC02540-201ENST00000455554 KCNQ5Q9NR82 932 aa4.24□□□□□ -1.73
LINC02540-201ENST00000455554 KBTBD4Q9NVX7 518 aa4.24□□□□□ -1.73
LINC02540-201ENST00000455554 NTMQ9P121 344 aa4.24□□□□□ -1.73
LINC02540-201ENST00000455554 SUPT16HQ9Y5B9 1047 aaKnown RBP4.24□□□□□ -1.73
LINC02540-201ENST00000455554 TNFRSF10CO14798 259 aa4.23□□□□□ -1.73
LINC02540-201ENST00000455554 FGF10O15520 208 aaPredicted RBP4.23□□□□□ -1.73
LINC02540-201ENST00000455554 SORBS3O60504 671 aa4.23□□□□□ -1.73
LINC02540-201ENST00000455554 GREM1O60565 184 aa4.23□□□□□ -1.73
LINC02540-201ENST00000455554 TACR1P25103 407 aa4.23□□□□□ -1.73
LINC02540-201ENST00000455554 SARSP49591 514 aaKnown RBP4.23□□□□□ -1.73
LINC02540-201ENST00000455554 ZNF761Q86XN6 746 aaPredicted RBP4.23□□□□□ -1.73
LINC02540-201ENST00000455554 C7orf61Q8IZ16 206 aa4.23□□□□□ -1.73
LINC02540-201ENST00000455554 Q8N1X5 172 aa4.23□□□□□ -1.73
LINC02540-201ENST00000455554 NOX5Q96PH1 765 aa4.23□□□□□ -1.73
LINC02540-201ENST00000455554 SRRTQ9BXP5 876 aaKnown RBP4.23□□□□□ -1.73
LINC02540-201ENST00000455554 RXFP1Q9HBX9 757 aa4.23□□□□□ -1.73
LINC02540-201ENST00000455554 MEIS3P2A8K0S8 358 aa4.22□□□□□ -1.73
LINC02540-201ENST00000455554 H0Y8X5 98 aa4.22□□□□□ -1.73
LINC02540-201ENST00000455554 PLATP00750 562 aa4.22□□□□□ -1.73
LINC02540-201ENST00000455554 PMLP29590 882 aa4.22□□□□□ -1.73
LINC02540-201ENST00000455554 EIF4A3P38919 411 aaKnown RBP4.22□□□□□ -1.73
LINC02540-201ENST00000455554 CRKP46108 304 aa4.22□□□□□ -1.73
LINC02540-201ENST00000455554 HMGA2P52926 109 aa4.22□□□□□ -1.73
LINC02540-201ENST00000455554 CLCQ05315 142 aa4.22□□□□□ -1.73
LINC02540-201ENST00000455554 LRRFIP1Q32MZ4 808 aaKnown RBP4.22□□□□□ -1.73
LINC02540-201ENST00000455554 GK5Q6ZS86 529 aa4.22□□□□□ -1.73
LINC02540-201ENST00000455554 ERMP1Q7Z2K6 904 aa4.22□□□□□ -1.73
LINC02540-201ENST00000455554 USP48Q86UV5 1035 aa4.22□□□□□ -1.73
LINC02540-201ENST00000455554 REXO1Q8N1G1 1221 aaKnown RBP4.22□□□□□ -1.73
LINC02540-201ENST00000455554 VTI1BQ9UEU0 232 aa4.22□□□□□ -1.73
LINC02540-201ENST00000455554 SHOXO15266 292 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 TBC1D8O95759 1140 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 SLPIP03973 132 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 GLI4P10075 376 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 C6P13671 934 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 L1CAMP32004 1257 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 GDF5P43026 501 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 NOP2P46087 812 aaKnown RBP4.21□□□□□ -1.74
LINC02540-201ENST00000455554 TBC1D10BQ4KMP7 808 aaPredicted RBP4.21□□□□□ -1.74
LINC02540-201ENST00000455554 SEZ6Q53EL9 994 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 TTLL7Q6ZT98 887 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 CCDC144CPQ8IYA2 1237 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 RGS22Q8NE09 1264 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 NLGN2Q8NFZ4 835 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 SMARCC2Q8TAQ2 1214 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 CPA5Q8WXQ8 436 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 TSPAN17Q96FV3 270 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 DHRS1Q96LJ7 313 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 SLC9A7Q96T83 725 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 SYT3Q9BQG1 590 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 MRS2Q9HD23 443 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 COPRSQ9NQ92 184 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 SPATA6Q9NWH7 488 aaPredicted RBP4.21□□□□□ -1.74
LINC02540-201ENST00000455554 SUCOQ9UBS9 1254 aaKnown RBP4.21□□□□□ -1.74
LINC02540-201ENST00000455554 FBLN5Q9UBX5 448 aa4.21□□□□□ -1.74
LINC02540-201ENST00000455554 C9IYK1 514 aa4.2□□□□□ -1.74
LINC02540-201ENST00000455554 TACR2P21452 398 aa4.2□□□□□ -1.74
LINC02540-201ENST00000455554 MCM4P33991 863 aa4.2□□□□□ -1.74
LINC02540-201ENST00000455554 TRIM26Q12899 539 aaPredicted RBP4.2□□□□□ -1.74
LINC02540-201ENST00000455554 NOL9Q5SY16 702 aaKnown RBP4.2□□□□□ -1.74
LINC02540-201ENST00000455554 CABP7Q86V35 215 aa4.2□□□□□ -1.74
LINC02540-201ENST00000455554 CHST13Q8NET6 341 aa4.2□□□□□ -1.74
LINC02540-201ENST00000455554 ADAMTS17Q8TE56 1095 aa4.2□□□□□ -1.74
LINC02540-201ENST00000455554 ZNF296Q8WUU4 475 aaPredicted RBP4.2□□□□□ -1.74
LINC02540-201ENST00000455554 DVL3Q92997 716 aaPredicted RBP4.2□□□□□ -1.74
LINC02540-201ENST00000455554 ZBTB8AQ96BR9 441 aa4.2□□□□□ -1.74
LINC02540-201ENST00000455554 PTCHD1Q96NR3 888 aa4.2□□□□□ -1.74
LINC02540-201ENST00000455554 ZNF165P49910 485 aa4.19□□□□□ -1.74
LINC02540-201ENST00000455554 CACNB2Q08289 660 aaPredicted RBP4.19□□□□□ -1.74
LINC02540-201ENST00000455554 SLC9A5Q14940 896 aa4.19□□□□□ -1.74
LINC02540-201ENST00000455554 SPRED1Q7Z699 444 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms