RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 PRR12Q9ULL5 1215 aa28.09■■■□□ 2.09
LYSMD2-202ENST00000454181 CTAGE5O15320 804 aa28.08■■■□□ 2.09
LYSMD2-202ENST00000454181 DYNC1LI2O43237 492 aaPredicted RBP28.08■■■□□ 2.09
LYSMD2-202ENST00000454181 ACRP10323 421 aa28.08■■■□□ 2.09
LYSMD2-202ENST00000454181 SNAP25P60880 206 aa28.08■■■□□ 2.09
LYSMD2-202ENST00000454181 CCDC96Q2M329 555 aa28.08■■■□□ 2.09
LYSMD2-202ENST00000454181 C16orf59Q7L2K0 433 aa28.08■■■□□ 2.09
LYSMD2-202ENST00000454181 SYMPKQ92797 1274 aaKnown RBP28.08■■■□□ 2.09
LYSMD2-202ENST00000454181 MTIF3Q9H2K0 278 aaKnown RBP28.08■■■□□ 2.09
LYSMD2-202ENST00000454181 CCPG1Q9ULG6 757 aa28.08■■■□□ 2.09
LYSMD2-202ENST00000454181 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.08■■■□□ 2.09
LYSMD2-202ENST00000454181 CYP2C18P33260 490 aa28.07■■■□□ 2.08
LYSMD2-202ENST00000454181 IQSEC1Q6DN90 963 aa28.07■■■□□ 2.08
LYSMD2-202ENST00000454181 NSMFQ6X4W1 530 aa28.07■■■□□ 2.08
LYSMD2-202ENST00000454181 ZNF365Q70YC5 407 aa28.07■■■□□ 2.08
LYSMD2-202ENST00000454181 SEZ6LQ9BYH1 1024 aa28.07■■■□□ 2.08
LYSMD2-202ENST00000454181 IL17RBQ9NRM6 502 aa28.07■■■□□ 2.08
LYSMD2-202ENST00000454181 TOMM22Q9NS69 142 aa28.07■■■□□ 2.08
LYSMD2-202ENST00000454181 PCDHB15Q9Y5E8 787 aa28.07■■■□□ 2.08
LYSMD2-202ENST00000454181 MCM3APO60318 1980 aa28.07■■■□□ 2.08
LYSMD2-202ENST00000454181 NMT2O60551 498 aa28.06■■■□□ 2.08
LYSMD2-202ENST00000454181 ITGA7Q13683 1181 aa28.06■■■□□ 2.08
LYSMD2-202ENST00000454181 EEPD1Q7L9B9 569 aa28.06■■■□□ 2.08
LYSMD2-202ENST00000454181 GAS2L1Q99501 681 aaPredicted RBP28.06■■■□□ 2.08
LYSMD2-202ENST00000454181 INCENPQ9NQS7 918 aa28.06■■■□□ 2.08
LYSMD2-202ENST00000454181 CYP39A1Q9NYL5 469 aa28.06■■■□□ 2.08
LYSMD2-202ENST00000454181 GNEQ9Y223 722 aaKnown RBP28.06■■■□□ 2.08
LYSMD2-202ENST00000454181 CD4P01730 458 aa28.05■■■□□ 2.08
LYSMD2-202ENST00000454181 SMPD1P17405 629 aa28.05■■■□□ 2.08
LYSMD2-202ENST00000454181 MUM1L1Q5H9M0 696 aa28.05■■■□□ 2.08
LYSMD2-202ENST00000454181 HIPK3Q9H422 1215 aa28.05■■■□□ 2.08
LYSMD2-202ENST00000454181 IL23AQ9NPF7 189 aa28.05■■■□□ 2.08
LYSMD2-202ENST00000454181 MSRAQ9UJ68 235 aa28.05■■■□□ 2.08
LYSMD2-202ENST00000454181 ASTN1O14525 1302 aa28.04■■■□□ 2.08
LYSMD2-202ENST00000454181 GRXCR1A8MXD5 290 aa28.04■■■□□ 2.08
LYSMD2-202ENST00000454181 KIAA1211Q6ZU35 1233 aa28.04■■■□□ 2.08
LYSMD2-202ENST00000454181 DCAF4Q8WV16 495 aa28.04■■■□□ 2.08
LYSMD2-202ENST00000454181 PBX4Q9BYU1 374 aa28.04■■■□□ 2.08
LYSMD2-202ENST00000454181 VTA1Q9NP79 307 aa28.04■■■□□ 2.08
LYSMD2-202ENST00000454181 ADD3Q9UEY8 706 aaKnown RBP28.04■■■□□ 2.08
LYSMD2-202ENST00000454181 Q9Y3F1 56 aa28.04■■■□□ 2.08
LYSMD2-202ENST00000454181 FGBP02675 491 aa28.03■■■□□ 2.08
LYSMD2-202ENST00000454181 ICAM1P05362 532 aa28.03■■■□□ 2.08
LYSMD2-202ENST00000454181 FBXO16Q8IX29 292 aaPredicted RBP28.03■■■□□ 2.08
LYSMD2-202ENST00000454181 SLC43A3Q8NBI5 491 aa28.03■■■□□ 2.08
LYSMD2-202ENST00000454181 EVI5LQ96CN4 794 aa28.03■■■□□ 2.08
LYSMD2-202ENST00000454181 PDGFCQ9NRA1 345 aa28.03■■■□□ 2.08
LYSMD2-202ENST00000454181 ANAPC4Q9UJX5 808 aa28.03■■■□□ 2.08
LYSMD2-202ENST00000454181 PBX2P40425 430 aa28.02■■■□□ 2.08
LYSMD2-202ENST00000454181 RAB30Q15771 203 aa28.02■■■□□ 2.08
LYSMD2-202ENST00000454181 RRP12Q5JTH9 1297 aaKnown RBP28.02■■■□□ 2.08
LYSMD2-202ENST00000454181 ANKRD45Q5TZF3 282 aa28.02■■■□□ 2.08
LYSMD2-202ENST00000454181 RASIP1Q5U651 963 aa28.02■■■□□ 2.08
LYSMD2-202ENST00000454181 DDX49Q9Y6V7 483 aaKnown RBP28.02■■■□□ 2.08
LYSMD2-202ENST00000454181 ORC4O43929 436 aa28.01■■■□□ 2.07
LYSMD2-202ENST00000454181 TAPT1Q6NXT6 567 aa28.01■■■□□ 2.07
LYSMD2-202ENST00000454181 HERVK_113Q902F9 699 aa28.01■■■□□ 2.07
LYSMD2-202ENST00000454181 HELLSQ9NRZ9 838 aa28.01■■■□□ 2.07
LYSMD2-202ENST00000454181 SLC16A2P36021 539 aa28■■■□□ 2.07
LYSMD2-202ENST00000454181 BAATQ14032 418 aaPredicted RBP28■■■□□ 2.07
LYSMD2-202ENST00000454181 VPS53Q5VIR6 699 aa28■■■□□ 2.07
LYSMD2-202ENST00000454181 RASGRP2Q7LDG7 609 aa28■■■□□ 2.07
LYSMD2-202ENST00000454181 FOXP2O15409 715 aa27.99■■■□□ 2.07
LYSMD2-202ENST00000454181 TOP1P11387 765 aaKnown RBP27.99■■■□□ 2.07
LYSMD2-202ENST00000454181 CCL23P55773 120 aa27.99■■■□□ 2.07
LYSMD2-202ENST00000454181 ALX1Q15699 326 aa27.99■■■□□ 2.07
LYSMD2-202ENST00000454181 SYDE2Q5VT97 1194 aa27.99■■■□□ 2.07
LYSMD2-202ENST00000454181 RPUSD2Q8IZ73 545 aaKnown RBP27.99■■■□□ 2.07
LYSMD2-202ENST00000454181 PPM1EQ8WY54 764 aa27.99■■■□□ 2.07
LYSMD2-202ENST00000454181 TRPV6Q9H1D0 765 aa27.99■■■□□ 2.07
LYSMD2-202ENST00000454181 RANBP17Q9H2T7 1088 aaKnown RBP27.99■■■□□ 2.07
LYSMD2-202ENST00000454181 PRDM12Q9H4Q4 367 aa27.99■■■□□ 2.07
LYSMD2-202ENST00000454181 PTPDC1A2A3K4 754 aa27.98■■■□□ 2.07
LYSMD2-202ENST00000454181 PSMC6P62333 389 aa27.98■■■□□ 2.07
LYSMD2-202ENST00000454181 TTBK2Q6IQ55 1244 aa27.98■■■□□ 2.07
LYSMD2-202ENST00000454181 PURBQ96QR8 312 aaKnown RBP27.98■■■□□ 2.07
LYSMD2-202ENST00000454181 GPCPD1Q9NPB8 672 aa27.98■■■□□ 2.07
LYSMD2-202ENST00000454181 PNMA2Q9UL42 364 aa27.98■■■□□ 2.07
LYSMD2-202ENST00000454181 CDH23Q9H251 3354 aa27.97■■■□□ 2.07
LYSMD2-202ENST00000454181 GRIN2DO15399 1336 aa27.97■■■□□ 2.07
LYSMD2-202ENST00000454181 B4GALT4O60513 344 aa27.97■■■□□ 2.07
LYSMD2-202ENST00000454181 PTGS1P23219 599 aa27.97■■■□□ 2.07
LYSMD2-202ENST00000454181 NOVP48745 357 aa27.97■■■□□ 2.07
LYSMD2-202ENST00000454181 DUSP28Q4G0W2 176 aa27.97■■■□□ 2.07
LYSMD2-202ENST00000454181 TJAP1Q5JTD0 557 aa27.97■■■□□ 2.07
LYSMD2-202ENST00000454181 BTNL9Q6UXG8 535 aa27.97■■■□□ 2.07
LYSMD2-202ENST00000454181 OTOP2Q7RTS6 562 aa27.97■■■□□ 2.07
LYSMD2-202ENST00000454181 USP38Q8NB14 1042 aa27.97■■■□□ 2.07
LYSMD2-202ENST00000454181 MPHOSPH6Q99547 160 aaKnown RBP27.97■■■□□ 2.07
LYSMD2-202ENST00000454181 NOC4LQ9BVI4 516 aaKnown RBP27.97■■■□□ 2.07
LYSMD2-202ENST00000454181 WDR11Q9BZH6 1224 aa27.97■■■□□ 2.07
LYSMD2-202ENST00000454181 SLC28A3Q9HAS3 691 aa27.97■■■□□ 2.07
LYSMD2-202ENST00000454181 GPHNQ9NQX3 736 aaPredicted RBP27.97■■■□□ 2.07
LYSMD2-202ENST00000454181 POLR3EQ9NVU0 708 aa27.97■■■□□ 2.07
LYSMD2-202ENST00000454181 EYSQ5T1H1 3165 aa27.97■■■□□ 2.07
LYSMD2-202ENST00000454181 FRMPD2Q68DX3 1309 aaPredicted RBP27.96■■■□□ 2.07
LYSMD2-202ENST00000454181 LOC102724159A0A0B4J2E5 919 aa27.96■■■□□ 2.07
LYSMD2-202ENST00000454181 PWP2Q15269 919 aaKnown RBP27.96■■■□□ 2.07
LYSMD2-202ENST00000454181 BRDTQ58F21 947 aaPredicted RBP27.96■■■□□ 2.07
LYSMD2-202ENST00000454181 MORC4Q8TE76 937 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms