RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 CSF2RAP15509 400 aa10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 MCCP23508 829 aa10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 SNAP25P60880 206 aa10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 BEX3Q00994 111 aa10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 CTDSPL2Q05D32 466 aa10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 MUM1L1Q5H9M0 696 aa10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 CCDC129Q6ZRS4 1044 aa10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 FAM160B2Q86V87 743 aa10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 STAG1Q8WVM7 1258 aa10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 PPP1R12CQ9BZL4 782 aa10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 SPC25Q9HBM1 224 aa10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 INCENPQ9NQS7 918 aa10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 IL17RBQ9NRM6 502 aa10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 ISY1Q9ULR0 285 aaKnown RBP10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 GNEQ9Y223 722 aaKnown RBP10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 MYO9BQ13459 2157 aa10.49□□□□□ -0.73
DEPDC1B-202ENST00000453022 TTC28Q96AY4 2481 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 GRXCR1A8MXD5 290 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 ACRP10323 421 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 PBX2P40425 430 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 SLC1A4P43007 532 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 TNFAIP2Q03169 654 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 PPIGQ13427 754 aaKnown RBP eCLIP10.48□□□□□ -0.737e-8■□□□□ 9.6
DEPDC1B-202ENST00000453022 LRRFIP1Q32MZ4 808 aaKnown RBP10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 TMEM63BQ5T3F8 832 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 KCTD1Q719H9 257 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 TLK2Q86UE8 772 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 SLC43A3Q8NBI5 491 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 CHURC1Q8WUH1 139 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 VTI1AQ96AJ9 217 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 TIFAQ96CG3 184 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 PBX4Q9BYU1 374 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 ZNF576Q9H609 170 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 GRIN2DO15399 1336 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 UMODL1Q5DID0 1318 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 ERC2O15083 957 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 PLA2G6O60733 806 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 SLC3A2P08195 630 aaKnown RBP10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 ALAS1P13196 640 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 SMPD1P17405 629 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 MX1P20591 662 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 CYP2C18P33260 490 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 NOVP48745 357 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 IKQ13123 557 aaPredicted RBP10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 VPS53Q5VIR6 699 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 CCDC174Q6PII3 467 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 CXCL17Q6UXB2 119 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 TRERF1Q96PN7 1200 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 PURBQ96QR8 312 aaKnown RBP10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 PDGFCQ9NRA1 345 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 CYP39A1Q9NYL5 469 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 PRR12Q9ULL5 1215 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 STX8Q9UNK0 236 aa10.48□□□□□ -0.73
DEPDC1B-202ENST00000453022 SCN10AQ9Y5Y9 1956 aa10.47□□□□□ -0.73
DEPDC1B-202ENST00000453022 MYH6P13533 1939 aa10.47□□□□□ -0.73
DEPDC1B-202ENST00000453022 ASB14A6NK59 587 aa10.47□□□□□ -0.73
DEPDC1B-202ENST00000453022 TSPY2A6NKD2 308 aa10.47□□□□□ -0.73
DEPDC1B-202ENST00000453022 FSCN1Q16658 493 aaKnown RBP10.47□□□□□ -0.73
DEPDC1B-202ENST00000453022 TKFCQ3LXA3 575 aa10.47□□□□□ -0.73
DEPDC1B-202ENST00000453022 RCSD1Q6JBY9 416 aa10.47□□□□□ -0.73
DEPDC1B-202ENST00000453022 TAPT1Q6NXT6 567 aa10.47□□□□□ -0.73
DEPDC1B-202ENST00000453022 ZNF365Q70YC5 407 aa10.47□□□□□ -0.73
DEPDC1B-202ENST00000453022 FBXO16Q8IX29 292 aaPredicted RBP10.47□□□□□ -0.73
DEPDC1B-202ENST00000453022 TMEM199Q8N511 208 aa10.47□□□□□ -0.73
DEPDC1B-202ENST00000453022 ANAPC4Q9UJX5 808 aa10.47□□□□□ -0.73
DEPDC1B-202ENST00000453022 PTPRSQ13332 1948 aa10.47□□□□□ -0.73
DEPDC1B-202ENST00000453022 KIAA1217Q5T5P2 1943 aa10.46□□□□□ -0.73
DEPDC1B-202ENST00000453022 TLR3O15455 904 aaKnown RBP10.46□□□□□ -0.74
DEPDC1B-202ENST00000453022 ITGA7Q13683 1181 aa10.46□□□□□ -0.74
DEPDC1B-202ENST00000453022 PSRC1Q6PGN9 363 aaPredicted RBP10.46□□□□□ -0.74
DEPDC1B-202ENST00000453022 NOL8Q76FK4 1167 aaKnown RBP10.46□□□□□ -0.74
DEPDC1B-202ENST00000453022 EEPD1Q7L9B9 569 aa10.46□□□□□ -0.74
DEPDC1B-202ENST00000453022 IL23AQ9NPF7 189 aa10.46□□□□□ -0.74
DEPDC1B-202ENST00000453022 RTN4Q9NQC3 1192 aaKnown RBP10.46□□□□□ -0.74
DEPDC1B-202ENST00000453022 CXXC1Q9P0U4 656 aaPredicted RBP10.46□□□□□ -0.74
DEPDC1B-202ENST00000453022 MTMR7Q9Y216 660 aa10.46□□□□□ -0.74
DEPDC1B-202ENST00000453022 DYNC1LI2O43237 492 aaPredicted RBP10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 ORC4O43929 436 aa10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 B4GALT4O60513 344 aa10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 RANBP6O60518 1105 aaKnown RBP10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 ICAM1P05362 532 aa10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 FGRP09769 529 aa10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 SLC16A2P36021 539 aa10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 PSMC6P62333 389 aa10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 PPP4R3BQ5MIZ7 849 aa10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 TTBK2Q6IQ55 1244 aa10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 NSMFQ6X4W1 530 aa10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 MORC4Q8TE76 937 aa10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 DCAF4Q8WV16 495 aa10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 HERVK_113Q902F9 699 aa10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 VWCEQ96DN2 955 aa10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 NOC4LQ9BVI4 516 aaKnown RBP10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 TRPV6Q9H1D0 765 aa10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 WNT8AQ9H1J5 351 aa10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 RANBP17Q9H2T7 1088 aaKnown RBP10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 HIPK3Q9H422 1215 aa10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 PRDM6Q9NQX0 595 aa10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 CCPG1Q9ULG6 757 aa10.45□□□□□ -0.74
DEPDC1B-202ENST00000453022 NFIBO00712 420 aa10.44□□□□□ -0.74
DEPDC1B-202ENST00000453022 CABYRO75952 493 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms