RNA–Protein interactions for RNA: ENST00000452025.5

RPE-214, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 3 BASIC

Gene RPE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-214ENST00000452025 SCN10AQ9Y5Y9 1956 aa12.87□□□□□ -0.35
RPE-214ENST00000452025 GRIN2DO15399 1336 aa12.87□□□□□ -0.35
RPE-214ENST00000452025 EPOPA6NHQ4 379 aa12.86□□□□□ -0.35
RPE-214ENST00000452025 MINDY4BA8MYZ0 360 aa12.86□□□□□ -0.35
RPE-214ENST00000452025 RFXAPO00287 272 aa12.86□□□□□ -0.35
RPE-214ENST00000452025 GTPBP6O43824 516 aaPredicted RBP12.86□□□□□ -0.35
RPE-214ENST00000452025 CABYRO75952 493 aa12.86□□□□□ -0.35
RPE-214ENST00000452025 ATP5JP18859 108 aa12.86□□□□□ -0.35
RPE-214ENST00000452025 OAZ1P54368 228 aa12.86□□□□□ -0.35
RPE-214ENST00000452025 NKX3-2P78367 333 aa12.86□□□□□ -0.35
RPE-214ENST00000452025 IKQ13123 557 aaPredicted RBP12.86□□□□□ -0.35
RPE-214ENST00000452025 TTLL4Q14679 1199 aa12.86□□□□□ -0.35
RPE-214ENST00000452025 KRT40Q6A162 431 aa12.86□□□□□ -0.35
RPE-214ENST00000452025 EEPD1Q7L9B9 569 aa12.86□□□□□ -0.35
RPE-214ENST00000452025 DEFB128Q7Z7B8 93 aa12.86□□□□□ -0.35
RPE-214ENST00000452025 FAM133AQ8N9E0 248 aa12.86□□□□□ -0.35
RPE-214ENST00000452025 CHMP4CQ96CF2 233 aa12.86□□□□□ -0.35
RPE-214ENST00000452025 CEP95Q96GE4 821 aa12.86□□□□□ -0.35
RPE-214ENST00000452025 GNEQ9Y223 722 aaKnown RBP12.86□□□□□ -0.35
RPE-214ENST00000452025 COG6Q9Y2V7 657 aa12.86□□□□□ -0.35
RPE-214ENST00000452025 TET1Q8NFU7 2136 aa12.86□□□□□ -0.35
RPE-214ENST00000452025 IGKV6D-41A0A0C4DH26 115 aa12.85□□□□□ -0.35
RPE-214ENST00000452025 SOWAHBA6NEL2 793 aa12.85□□□□□ -0.35
RPE-214ENST00000452025 ERC2O15083 957 aa12.85□□□□□ -0.35
RPE-214ENST00000452025 DYNC1LI2O43237 492 aaPredicted RBP12.85□□□□□ -0.35
RPE-214ENST00000452025 ZEB2O60315 1214 aa12.85□□□□□ -0.35
RPE-214ENST00000452025 PRDM1O75626 825 aa12.85□□□□□ -0.35
RPE-214ENST00000452025 SMPD1P17405 629 aa12.85□□□□□ -0.35
RPE-214ENST00000452025 EPB41L4AQ9HCS5 686 aaPredicted RBP12.85□□□□□ -0.35
RPE-214ENST00000452025 MTCH2Q9Y6C9 303 aa12.85□□□□□ -0.35
RPE-214ENST00000452025 PLIN4Q96Q06 1357 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 TRIP12Q14669 1992 aaPredicted RBP12.84□□□□□ -0.35
RPE-214ENST00000452025 FAM86C2PA6NEL3 165 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 ASB14A6NK59 587 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 HMMRO75330 724 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 CYP2C9P11712 490 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 BMP3P12645 472 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 ALAS1P13196 640 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 TDO2P48775 406 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 STAT2P52630 851 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 SBK1Q52WX2 424 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 TMEM67Q5HYA8 995 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 TMEM63BQ5T3F8 832 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 ZSCAN25Q6NSZ9 544 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 RPUSD2Q8IZ73 545 aaKnown RBP12.84□□□□□ -0.35
RPE-214ENST00000452025 VWCEQ96DN2 955 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 AGBL1Q96MI9 1066 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 LRFN3Q9BTN0 628 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 ALDH8A1Q9H2A2 487 aaPredicted RBP12.84□□□□□ -0.35
RPE-214ENST00000452025 EPHX3Q9H6B9 360 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 PDGFCQ9NRA1 345 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 TRMT13Q9NUP7 481 aaKnown RBP12.84□□□□□ -0.35
RPE-214ENST00000452025 MUC6Q6W4X9 2439 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 TNKSO95271 1327 aa12.84□□□□□ -0.35
RPE-214ENST00000452025 SIP14410 1827 aa12.83□□□□□ -0.35
RPE-214ENST00000452025 GSG1L2A8MUP6 293 aa12.83□□□□□ -0.36
RPE-214ENST00000452025 TMEM232C9JQI7 657 aa12.83□□□□□ -0.36
RPE-214ENST00000452025 CCER2I3L3R5 266 aa12.83□□□□□ -0.36
RPE-214ENST00000452025 ARHGEF15O94989 841 aa12.83□□□□□ -0.36
RPE-214ENST00000452025 TTLL1O95922 423 aa12.83□□□□□ -0.36
RPE-214ENST00000452025 SLFN13Q68D06 897 aa12.83□□□□□ -0.36
RPE-214ENST00000452025 GMCL1P1Q8NEA9 526 aa12.83□□□□□ -0.36
RPE-214ENST00000452025 ARNTL2Q8WYA1 636 aa12.83□□□□□ -0.36
RPE-214ENST00000452025 STRBPQ96SI9 672 aaKnown RBP12.83□□□□□ -0.36
RPE-214ENST00000452025 MTMR4Q9NYA4 1195 aa12.83□□□□□ -0.36
RPE-214ENST00000452025 ZNF536O15090 1300 aa12.83□□□□□ -0.36
RPE-214ENST00000452025 RAB11FIP3O75154 756 aa12.82□□□□□ -0.36
RPE-214ENST00000452025 PFKMP08237 780 aa12.82□□□□□ -0.36
RPE-214ENST00000452025 SNAP25P60880 206 aa12.82□□□□□ -0.36
RPE-214ENST00000452025 MUM1L1Q5H9M0 696 aa12.82□□□□□ -0.36
RPE-214ENST00000452025 FAM47CQ5HY64 1035 aa12.82□□□□□ -0.36
RPE-214ENST00000452025 TMEM31Q5JXX7 168 aa12.82□□□□□ -0.36
RPE-214ENST00000452025 NSMFQ6X4W1 530 aa12.82□□□□□ -0.36
RPE-214ENST00000452025 RASGRP2Q7LDG7 609 aa12.82□□□□□ -0.36
RPE-214ENST00000452025 SIRT2Q8IXJ6 389 aa12.82□□□□□ -0.36
RPE-214ENST00000452025 PPP1R13LQ8WUF5 828 aa12.82□□□□□ -0.36
RPE-214ENST00000452025 TRERF1Q96PN7 1200 aa12.82□□□□□ -0.36
RPE-214ENST00000452025 SLC9A7Q96T83 725 aa12.82□□□□□ -0.36
RPE-214ENST00000452025 GPAA1O43292 621 aa12.81□□□□□ -0.36
RPE-214ENST00000452025 MYL3P08590 195 aa12.81□□□□□ -0.36
RPE-214ENST00000452025 ACTN1P12814 892 aa12.81□□□□□ -0.36
RPE-214ENST00000452025 TAPT1Q6NXT6 567 aa12.81□□□□□ -0.36
RPE-214ENST00000452025 GIMAP6Q6P9H5 292 aa12.81□□□□□ -0.36
RPE-214ENST00000452025 SPRED2Q7Z698 418 aa12.81□□□□□ -0.36
RPE-214ENST00000452025 FAM160B2Q86V87 743 aa12.81□□□□□ -0.36
RPE-214ENST00000452025 RPAP2Q8IXW5 612 aaPredicted RBP12.81□□□□□ -0.36
RPE-214ENST00000452025 ZNF444Q8N0Y2 327 aaPredicted RBP12.81□□□□□ -0.36
RPE-214ENST00000452025 GDPD5Q8WTR4 605 aa12.81□□□□□ -0.36
RPE-214ENST00000452025 KHSRPQ92945 711 aaKnown RBP eCLIP12.81□□□□□ -0.363e-8■■■■□ 21.2
RPE-214ENST00000452025 OSBP2Q969R2 916 aa12.81□□□□□ -0.36
RPE-214ENST00000452025 PURBQ96QR8 312 aaKnown RBP12.81□□□□□ -0.36
RPE-214ENST00000452025 SEZ6LQ9BYH1 1024 aa12.81□□□□□ -0.36
RPE-214ENST00000452025 VTA1Q9NP79 307 aa12.81□□□□□ -0.36
RPE-214ENST00000452025 COG5Q9UP83 839 aa12.81□□□□□ -0.36
RPE-214ENST00000452025 PIEZO1Q92508 2521 aa12.81□□□□□ -0.36
RPE-214ENST00000452025 M0R2C6 588 aa12.8□□□□□ -0.36
RPE-214ENST00000452025 SMARCA5O60264 1052 aaPredicted RBP12.8□□□□□ -0.36
RPE-214ENST00000452025 TSPY3P0CV98 308 aa12.8□□□□□ -0.36
RPE-214ENST00000452025 TSPY8P0CW00 308 aa12.8□□□□□ -0.36
RPE-214ENST00000452025 FDX1P10109 184 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms