RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 CDC42EP5Q6NZY7 148 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 REXO1L1PQ8IX06 675 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 PDCL2Q8N4E4 241 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 LRRN4CLQ8ND94 238 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 NELFBQ8WX92 580 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 VPS16Q9H269 839 aa13.6□□□□□ -0.23
COL27A1-202ENST00000451716 FEZ2Q9UHY8 353 aaPredicted RBP13.6□□□□□ -0.23
COL27A1-202ENST00000451716 SLC16A2P36021 539 aa13.59□□□□□ -0.23
COL27A1-202ENST00000451716 TECP42680 631 aa13.59□□□□□ -0.23
COL27A1-202ENST00000451716 TCP10Q12799 353 aa13.59□□□□□ -0.23
COL27A1-202ENST00000451716 TTBK2Q6IQ55 1244 aa13.59□□□□□ -0.23
COL27A1-202ENST00000451716 NLGN1Q8N2Q7 840 aa13.59□□□□□ -0.23
COL27A1-202ENST00000451716 IGSF22Q8N9C0 903 aa13.59□□□□□ -0.23
COL27A1-202ENST00000451716 SERPINB13Q9UIV8 391 aa13.59□□□□□ -0.23
COL27A1-202ENST00000451716 ARHGAP6O43182 974 aa13.59□□□□□ -0.23
COL27A1-202ENST00000451716 NPR1P16066 1061 aa13.59□□□□□ -0.23
COL27A1-202ENST00000451716 KCNJ6P48051 423 aa13.59□□□□□ -0.23
COL27A1-202ENST00000451716 PAK1Q13153 545 aa13.59□□□□□ -0.23
COL27A1-202ENST00000451716 ZNF658Q5TYW1 1059 aaPredicted RBP13.59□□□□□ -0.23
COL27A1-202ENST00000451716 KIAA0825Q8IV33 1275 aa13.59□□□□□ -0.23
COL27A1-202ENST00000451716 PPP2R2CQ9Y2T4 447 aa13.59□□□□□ -0.23
COL27A1-202ENST00000451716 ANKRD31Q8N7Z5 1873 aa13.59□□□□□ -0.23
COL27A1-202ENST00000451716 CCDC172P0C7W6 258 aa13.58□□□□□ -0.23
COL27A1-202ENST00000451716 GNA11P29992 359 aa13.58□□□□□ -0.23
COL27A1-202ENST00000451716 PMS1P54277 932 aaKnown RBP13.58□□□□□ -0.23
COL27A1-202ENST00000451716 KRT31Q15323 416 aa13.58□□□□□ -0.23
COL27A1-202ENST00000451716 APOBEC3HQ6NTF7 200 aaKnown RBP13.58□□□□□ -0.23
COL27A1-202ENST00000451716 POTEDQ86YR6 584 aa13.58□□□□□ -0.23
COL27A1-202ENST00000451716 REXO1Q8N1G1 1221 aaKnown RBP13.58□□□□□ -0.23
COL27A1-202ENST00000451716 ZNF526Q8TF50 670 aaPredicted RBP13.58□□□□□ -0.23
COL27A1-202ENST00000451716 CCDC12Q8WUD4 166 aaPredicted RBP13.58□□□□□ -0.23
COL27A1-202ENST00000451716 TAB2Q9NYJ8 693 aa13.58□□□□□ -0.23
COL27A1-202ENST00000451716 CALCOCO1Q9P1Z2 691 aa13.58□□□□□ -0.23
COL27A1-202ENST00000451716 SOWAHDA6NJG2 315 aa13.58□□□□□ -0.24
COL27A1-202ENST00000451716 OR52Z1P0C646 297 aa13.58□□□□□ -0.24
COL27A1-202ENST00000451716 PLCG1P19174 1290 aa13.58□□□□□ -0.24
COL27A1-202ENST00000451716 KMT5BQ4FZB7 885 aa13.58□□□□□ -0.24
COL27A1-202ENST00000451716 TRIM65Q6PJ69 517 aa13.58□□□□□ -0.24
COL27A1-202ENST00000451716 KRT25Q7Z3Z0 450 aa13.58□□□□□ -0.24
COL27A1-202ENST00000451716 NEK8Q86SG6 692 aa13.58□□□□□ -0.24
COL27A1-202ENST00000451716 UIMC1Q96RL1 719 aa13.58□□□□□ -0.24
COL27A1-202ENST00000451716 NCAPGQ9BPX3 1015 aa13.58□□□□□ -0.24
COL27A1-202ENST00000451716 LTBP1Q14766 1721 aa13.58□□□□□ -0.24
COL27A1-202ENST00000451716 ADAMTSL1Q8N6G6 1762 aa13.58□□□□□ -0.24
COL27A1-202ENST00000451716 SHMT1P34896 483 aa13.57□□□□□ -0.24
COL27A1-202ENST00000451716 TXKP42681 527 aa13.57□□□□□ -0.24
COL27A1-202ENST00000451716 ETF1P62495 437 aaKnown RBP13.57□□□□□ -0.24
COL27A1-202ENST00000451716 KCTD1Q719H9 257 aa13.57□□□□□ -0.24
COL27A1-202ENST00000451716 TMC4Q7Z404 712 aa13.57□□□□□ -0.24
COL27A1-202ENST00000451716 CABP7Q86V35 215 aa13.57□□□□□ -0.24
COL27A1-202ENST00000451716 PYM1Q9BRP8 204 aaKnown RBP13.57□□□□□ -0.24
COL27A1-202ENST00000451716 RIOX1Q9H6W3 641 aa13.57□□□□□ -0.24
COL27A1-202ENST00000451716 AKR1B15C9JRZ8 316 aaPredicted RBP13.57□□□□□ -0.24
COL27A1-202ENST00000451716 KIF2AO00139 706 aaPredicted RBP13.57□□□□□ -0.24
COL27A1-202ENST00000451716 N4BP3O15049 544 aa13.57□□□□□ -0.24
COL27A1-202ENST00000451716 NOVP48745 357 aa13.57□□□□□ -0.24
COL27A1-202ENST00000451716 MAP2K1Q02750 393 aaPredicted RBP13.57□□□□□ -0.24
COL27A1-202ENST00000451716 AKT1S1Q96B36 256 aa13.57□□□□□ -0.24
COL27A1-202ENST00000451716 RWDD2AQ9UIY3 292 aa13.57□□□□□ -0.24
COL27A1-202ENST00000451716 PARP3Q9Y6F1 533 aa13.57□□□□□ -0.24
COL27A1-202ENST00000451716 A0A0U1RQJ8 604 aa13.57□□□□□ -0.24
COL27A1-202ENST00000451716 STX10O60499 249 aa13.57□□□□□ -0.24
COL27A1-202ENST00000451716 CASP14P31944 242 aa13.57□□□□□ -0.24
COL27A1-202ENST00000451716 RBM5P52756 815 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL27A1-202ENST00000451716 GABPB1Q06547 395 aaPredicted RBP13.57□□□□□ -0.24
COL27A1-202ENST00000451716 UBE2SQ16763 222 aa13.57□□□□□ -0.24
COL27A1-202ENST00000451716 PPFIBP1Q86W92 1011 aa13.57□□□□□ -0.24
COL27A1-202ENST00000451716 ATRIPQ8WXE1 791 aa13.57□□□□□ -0.24
COL27A1-202ENST00000451716 TEKT1Q969V4 418 aa13.57□□□□□ -0.24
COL27A1-202ENST00000451716 KLRC4O43908 158 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 TDP2O95551 362 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 TTLL1O95922 423 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 ALDH1B1P30837 517 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 PBX1P40424 430 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 FXR1P51114 621 aaKnown RBP eCLIP13.56□□□□□ -0.24
COL27A1-202ENST00000451716 ELF2Q15723 593 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 TMEM132AQ24JP5 1023 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 FILIP1LQ4L180 1135 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 ADGRF4Q8IZF3 695 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 HPS3Q969F9 1004 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 GJA10Q969M2 543 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 CCSER1Q9C0I3 900 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 KBTBD4Q9NVX7 518 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 RMND1Q9NWS8 449 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 RSPH14Q9UHP6 348 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 KCNJ18B7U540 433 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 RNF225M0QZC1 329 aaPredicted RBP13.56□□□□□ -0.24
COL27A1-202ENST00000451716 SLC37A4O43826 429 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 PPP1R11O60927 126 aaPredicted RBP13.56□□□□□ -0.24
COL27A1-202ENST00000451716 CRKP46108 304 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 KCNJ12Q14500 433 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 CCDC96Q2M329 555 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 GPATCH11Q8N954 259 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 MASTLQ96GX5 879 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 TMX4Q9H1E5 349 aaPredicted RBP13.56□□□□□ -0.24
COL27A1-202ENST00000451716 JMJD4Q9H9V9 463 aa13.56□□□□□ -0.24
COL27A1-202ENST00000451716 LRRC37AA6NMS7 1700 aa13.55□□□□□ -0.24
COL27A1-202ENST00000451716 IGKV6D-41A0A0C4DH26 115 aa13.55□□□□□ -0.24
COL27A1-202ENST00000451716 PES1O00541 588 aaKnown RBP13.55□□□□□ -0.24
COL27A1-202ENST00000451716 EDIL3O43854 480 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms