RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 FOSL2P15408 326 aa12.09□□□□□ -0.47
LINC01004-202ENST00000450686 MCCP23508 829 aa12.09□□□□□ -0.47
LINC01004-202ENST00000450686 COPB2P35606 906 aa12.09□□□□□ -0.47
LINC01004-202ENST00000450686 PBX2P40425 430 aa12.09□□□□□ -0.47
LINC01004-202ENST00000450686 SMAD3P84022 425 aaKnown RBP12.09□□□□□ -0.47
LINC01004-202ENST00000450686 TFAP4Q01664 338 aa12.09□□□□□ -0.47
LINC01004-202ENST00000450686 GRIN2CQ14957 1233 aa12.09□□□□□ -0.47
LINC01004-202ENST00000450686 GIMAP6Q6P9H5 292 aa12.09□□□□□ -0.47
LINC01004-202ENST00000450686 MAMDC4Q6UXC1 1216 aa12.09□□□□□ -0.47
LINC01004-202ENST00000450686 C16orf59Q7L2K0 433 aa12.09□□□□□ -0.47
LINC01004-202ENST00000450686 FBXO22Q8NEZ5 403 aa12.09□□□□□ -0.47
LINC01004-202ENST00000450686 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC01004-202ENST00000450686 FSD1Q9BTV5 496 aa12.09□□□□□ -0.47
LINC01004-202ENST00000450686 KATNBL1Q9H079 304 aa12.09□□□□□ -0.47
LINC01004-202ENST00000450686 TBX21Q9UL17 535 aa12.09□□□□□ -0.47
LINC01004-202ENST00000450686 ZNF536O15090 1300 aa12.09□□□□□ -0.47
LINC01004-202ENST00000450686 SOWAHBA6NEL2 793 aa12.08□□□□□ -0.48
LINC01004-202ENST00000450686 PATL2C9JE40 543 aaKnown RBP12.08□□□□□ -0.48
LINC01004-202ENST00000450686 CTAGE5O15320 804 aa12.08□□□□□ -0.48
LINC01004-202ENST00000450686 DUSP11O75319 330 aaKnown RBP12.08□□□□□ -0.48
LINC01004-202ENST00000450686 TTLL1O95922 423 aa12.08□□□□□ -0.48
LINC01004-202ENST00000450686 PPARAQ07869 468 aa12.08□□□□□ -0.48
LINC01004-202ENST00000450686 IKQ13123 557 aaPredicted RBP12.08□□□□□ -0.48
LINC01004-202ENST00000450686 MUM1L1Q5H9M0 696 aa12.08□□□□□ -0.48
LINC01004-202ENST00000450686 VPS53Q5VIR6 699 aa12.08□□□□□ -0.48
LINC01004-202ENST00000450686 EEPD1Q7L9B9 569 aa12.08□□□□□ -0.48
LINC01004-202ENST00000450686 ANKRD33Q7Z3H0 272 aa12.08□□□□□ -0.48
LINC01004-202ENST00000450686 NEDD1Q8NHV4 660 aa12.08□□□□□ -0.48
LINC01004-202ENST00000450686 PPP1R13LQ8WUF5 828 aa12.08□□□□□ -0.48
LINC01004-202ENST00000450686 CHMP4BQ9H444 224 aaKnown RBP12.08□□□□□ -0.48
LINC01004-202ENST00000450686 A1CFQ9NQ94 594 aaKnown RBP12.08□□□□□ -0.48
LINC01004-202ENST00000450686 PRDM6Q9NQX0 595 aa12.08□□□□□ -0.48
LINC01004-202ENST00000450686 PDGFCQ9NRA1 345 aa12.08□□□□□ -0.48
LINC01004-202ENST00000450686 RNF146Q9NTX7 359 aa12.08□□□□□ -0.48
LINC01004-202ENST00000450686 FEM1BQ9UK73 627 aa12.08□□□□□ -0.48
LINC01004-202ENST00000450686 UMODL1Q5DID0 1318 aa12.08□□□□□ -0.48
LINC01004-202ENST00000450686 PLIN4Q96Q06 1357 aa12.07□□□□□ -0.48
LINC01004-202ENST00000450686 DCDC2CA8MYV0 355 aa12.07□□□□□ -0.48
LINC01004-202ENST00000450686 ATP2A1O14983 1001 aa12.07□□□□□ -0.48
LINC01004-202ENST00000450686 TIMP1P01033 207 aa12.07□□□□□ -0.48
LINC01004-202ENST00000450686 ALAS1P13196 640 aa12.07□□□□□ -0.48
LINC01004-202ENST00000450686 CSF2RAP15509 400 aa12.07□□□□□ -0.48
LINC01004-202ENST00000450686 DNAJB2P25686 324 aa12.07□□□□□ -0.48
LINC01004-202ENST00000450686 CYP2C18P33260 490 aa12.07□□□□□ -0.48
LINC01004-202ENST00000450686 GNASQ5JWF2 1037 aa12.07□□□□□ -0.48
LINC01004-202ENST00000450686 ZMYM1Q5SVZ6 1142 aa12.07□□□□□ -0.48
LINC01004-202ENST00000450686 NOL8Q76FK4 1167 aaKnown RBP12.07□□□□□ -0.48
LINC01004-202ENST00000450686 GMCL1P1Q8NEA9 526 aa12.07□□□□□ -0.48
LINC01004-202ENST00000450686 NUP133Q8WUM0 1156 aa12.07□□□□□ -0.48
LINC01004-202ENST00000450686 MKL1Q969V6 931 aa12.07□□□□□ -0.48
LINC01004-202ENST00000450686 GLT1D1Q96MS3 346 aa12.07□□□□□ -0.48
LINC01004-202ENST00000450686 TSEN34Q9BSV6 310 aaKnown RBP12.07□□□□□ -0.48
LINC01004-202ENST00000450686 NAPBQ9H115 298 aa12.07□□□□□ -0.48
LINC01004-202ENST00000450686 UPF3AQ9H1J1 476 aaKnown RBP12.07□□□□□ -0.48
LINC01004-202ENST00000450686 STX8Q9UNK0 236 aa12.07□□□□□ -0.48
LINC01004-202ENST00000450686 MOXD2PA6NHM9 499 aa12.06□□□□□ -0.48
LINC01004-202ENST00000450686 ZFYP08048 801 aaPredicted RBP12.06□□□□□ -0.48
LINC01004-202ENST00000450686 GNAT2P19087 354 aa12.06□□□□□ -0.48
LINC01004-202ENST00000450686 SLC16A2P36021 539 aa12.06□□□□□ -0.48
LINC01004-202ENST00000450686 CDK7P50613 346 aa12.06□□□□□ -0.48
LINC01004-202ENST00000450686 GJA9P57773 515 aa12.06□□□□□ -0.48
LINC01004-202ENST00000450686 PSMC6P62333 389 aa12.06□□□□□ -0.48
LINC01004-202ENST00000450686 TTBK2Q6IQ55 1244 aa12.06□□□□□ -0.48
LINC01004-202ENST00000450686 CXCL17Q6UXB2 119 aa12.06□□□□□ -0.48
LINC01004-202ENST00000450686 FBXO16Q8IX29 292 aaPredicted RBP12.06□□□□□ -0.48
LINC01004-202ENST00000450686 MSL3Q8N5Y2 521 aaKnown RBP12.06□□□□□ -0.48
LINC01004-202ENST00000450686 FAM133AQ8N9E0 248 aa12.06□□□□□ -0.48
LINC01004-202ENST00000450686 CHST13Q8NET6 341 aa12.06□□□□□ -0.48
LINC01004-202ENST00000450686 PPM1EQ8WY54 764 aa12.06□□□□□ -0.48
LINC01004-202ENST00000450686 TRERF1Q96PN7 1200 aa12.06□□□□□ -0.48
LINC01004-202ENST00000450686 ABHD16BQ9H3Z7 469 aa12.06□□□□□ -0.48
LINC01004-202ENST00000450686 ACAD9Q9H845 621 aa12.06□□□□□ -0.48
LINC01004-202ENST00000450686 IL17RBQ9NRM6 502 aa12.06□□□□□ -0.48
LINC01004-202ENST00000450686 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.06□□□□□ -0.48
LINC01004-202ENST00000450686 A0A0U1RQG5 324 aaPredicted RBP12.05□□□□□ -0.48
LINC01004-202ENST00000450686 ARVCFO00192 962 aa12.05□□□□□ -0.48
LINC01004-202ENST00000450686 SMPD1P17405 629 aa12.05□□□□□ -0.48
LINC01004-202ENST00000450686 CST5P28325 142 aaPredicted RBP12.05□□□□□ -0.48
LINC01004-202ENST00000450686 SLC1A4P43007 532 aa12.05□□□□□ -0.48
LINC01004-202ENST00000450686 STAT2P52630 851 aa12.05□□□□□ -0.48
LINC01004-202ENST00000450686 TNFAIP2Q03169 654 aa12.05□□□□□ -0.48
LINC01004-202ENST00000450686 PDE4BQ07343 736 aa12.05□□□□□ -0.48
LINC01004-202ENST00000450686 TMEM240Q5SV17 173 aa12.05□□□□□ -0.48
LINC01004-202ENST00000450686 MFSD5Q6N075 450 aa12.05□□□□□ -0.48
LINC01004-202ENST00000450686 FAM126BQ8IXS8 530 aa12.05□□□□□ -0.48
LINC01004-202ENST00000450686 TOX2Q96NM4 488 aa12.05□□□□□ -0.48
LINC01004-202ENST00000450686 NACAP1Q9BZK3 213 aa12.05□□□□□ -0.48
LINC01004-202ENST00000450686 TRPV6Q9H1D0 765 aa12.05□□□□□ -0.48
LINC01004-202ENST00000450686 CXXC1Q9P0U4 656 aaPredicted RBP12.05□□□□□ -0.48
LINC01004-202ENST00000450686 PRR12Q9ULL5 1215 aa12.05□□□□□ -0.48
LINC01004-202ENST00000450686 GRIN2DO15399 1336 aa12.05□□□□□ -0.48
LINC01004-202ENST00000450686 FRMPD2Q68DX3 1309 aaPredicted RBP12.05□□□□□ -0.48
LINC01004-202ENST00000450686 TRANK1O15050 2925 aa12.04□□□□□ -0.48
LINC01004-202ENST00000450686 TSPY2A6NKD2 308 aa12.04□□□□□ -0.48
LINC01004-202ENST00000450686 RANBP6O60518 1105 aaKnown RBP12.04□□□□□ -0.48
LINC01004-202ENST00000450686 MX1P20591 662 aa12.04□□□□□ -0.48
LINC01004-202ENST00000450686 CCL23P55773 120 aa12.04□□□□□ -0.48
LINC01004-202ENST00000450686 CCDC96Q2M329 555 aa12.04□□□□□ -0.48
LINC01004-202ENST00000450686 NSMFQ6X4W1 530 aa12.04□□□□□ -0.48
LINC01004-202ENST00000450686 ZNF365Q70YC5 407 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms