RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 AFG3L2Q9Y4W6 797 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 SNCAIPQ9Y6H5 919 aa11.03□□□□□ -0.64
RFC4-210ENST00000449502 POTECB2RU33 542 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 GCOM1H8Y6P7 765 aaPredicted RBP11.02□□□□□ -0.65
RFC4-210ENST00000449502 M0R2N6 131 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 CXCL11O14625 94 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 CTAGE5O15320 804 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 POLR2MP0CAP2 368 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 LIG1P18858 919 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 CMA1P23946 247 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 TXLNAP40222 546 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 FAM160A1Q05DH4 1040 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 ORC2Q13416 577 aaPredicted RBP11.02□□□□□ -0.65
RFC4-210ENST00000449502 UBE2SQ16763 222 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 GADL1Q6ZQY3 521 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 CPXCR1Q8N123 301 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 C2orf69Q8N8R5 385 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 ZNF526Q8TF50 670 aaPredicted RBP11.02□□□□□ -0.65
RFC4-210ENST00000449502 SLC10A4Q96EP9 437 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 OTUD5Q96G74 571 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 TNMDQ9H2S6 317 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 TMEM260Q9NX78 707 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 HOXC10Q9NYD6 342 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 DACT1Q9NYF0 836 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 TMEM63CQ9P1W3 806 aa11.02□□□□□ -0.65
RFC4-210ENST00000449502 SRPRBQ9Y5M8 271 aaKnown RBP11.02□□□□□ -0.65
RFC4-210ENST00000449502 SIPA1L1O43166 1804 aa11.01□□□□□ -0.65
RFC4-210ENST00000449502 GOLGA6L3A6NEY3 463 aa11.01□□□□□ -0.65
RFC4-210ENST00000449502 UNCXA6NJT0 531 aa11.01□□□□□ -0.65
RFC4-210ENST00000449502 LAD1O00515 517 aa11.01□□□□□ -0.65
RFC4-210ENST00000449502 ICAM1P05362 532 aa11.01□□□□□ -0.65
RFC4-210ENST00000449502 PTPREP23469 700 aa11.01□□□□□ -0.65
RFC4-210ENST00000449502 SYKP43405 635 aa11.01□□□□□ -0.65
RFC4-210ENST00000449502 FKBP1BP68106 108 aa11.01□□□□□ -0.65
RFC4-210ENST00000449502 PTGDRQ13258 359 aa11.01□□□□□ -0.65
RFC4-210ENST00000449502 PABPC4Q13310 644 aaKnown RBP eCLIP11.01□□□□□ -0.65
RFC4-210ENST00000449502 COG2Q14746 738 aa11.01□□□□□ -0.65
RFC4-210ENST00000449502 ZRSR1Q15695 479 aaKnown RBP11.01□□□□□ -0.65
RFC4-210ENST00000449502 MAP3K11Q16584 847 aa11.01□□□□□ -0.65
RFC4-210ENST00000449502 NOM1Q5C9Z4 860 aaKnown RBP11.01□□□□□ -0.65
RFC4-210ENST00000449502 SH3D19Q5HYK7 790 aa11.01□□□□□ -0.65
RFC4-210ENST00000449502 DTHD1Q6ZMT9 781 aa11.01□□□□□ -0.65
RFC4-210ENST00000449502 FASTKD5Q7L8L6 764 aaKnown RBP11.01□□□□□ -0.65
RFC4-210ENST00000449502 ZNF579Q8NAF0 562 aaKnown RBP11.01□□□□□ -0.65
RFC4-210ENST00000449502 SDF4Q9BRK5 362 aa11.01□□□□□ -0.65
RFC4-210ENST00000449502 ANO3Q9BYT9 981 aa11.01□□□□□ -0.65
RFC4-210ENST00000449502 HOOK1Q9UJC3 728 aaKnown RBP11.01□□□□□ -0.65
RFC4-210ENST00000449502 FBXO2Q9UK22 296 aaPredicted RBP11.01□□□□□ -0.65
RFC4-210ENST00000449502 MORC2Q9Y6X9 1032 aaPredicted RBP11.01□□□□□ -0.65
RFC4-210ENST00000449502 SSC5DA1L4H1 1573 aa11.01□□□□□ -0.65
RFC4-210ENST00000449502 A0A1B0GVL5 298 aa11□□□□□ -0.65
RFC4-210ENST00000449502 SYCE3A1L190 88 aa11□□□□□ -0.65
RFC4-210ENST00000449502 VWA3AA6NCI4 1184 aa11□□□□□ -0.65
RFC4-210ENST00000449502 SPDYE5A6NIY4 337 aa11□□□□□ -0.65
RFC4-210ENST00000449502 NEMFO60524 1076 aa11□□□□□ -0.65
RFC4-210ENST00000449502 CFBP00751 764 aa11□□□□□ -0.65
RFC4-210ENST00000449502 OR52Z1P0C646 297 aa11□□□□□ -0.65
RFC4-210ENST00000449502 ALAS1P13196 640 aa11□□□□□ -0.65
RFC4-210ENST00000449502 PFKFB1P16118 471 aa11□□□□□ -0.65
RFC4-210ENST00000449502 GCFC2P16383 781 aaKnown RBP11□□□□□ -0.65
RFC4-210ENST00000449502 OSBPP22059 807 aa11□□□□□ -0.65
RFC4-210ENST00000449502 ZNF76P36508 570 aa11□□□□□ -0.65
RFC4-210ENST00000449502 IRX3P78415 501 aaPredicted RBP11□□□□□ -0.65
RFC4-210ENST00000449502 ATP2C1P98194 919 aaPredicted RBP11□□□□□ -0.65
RFC4-210ENST00000449502 PPIL2Q13356 520 aa11□□□□□ -0.65
RFC4-210ENST00000449502 DGKZQ13574 1117 aa11□□□□□ -0.65
RFC4-210ENST00000449502 ARL6IP4Q66PJ3 421 aaKnown RBP11□□□□□ -0.65
RFC4-210ENST00000449502 USP17L6PQ6QN14 398 aa11□□□□□ -0.65
RFC4-210ENST00000449502 CATSPERGQ6ZRH7 1159 aa11□□□□□ -0.65
RFC4-210ENST00000449502 MOB2Q70IA6 237 aa11□□□□□ -0.65
RFC4-210ENST00000449502 FCHSD1Q86WN1 690 aa11□□□□□ -0.65
RFC4-210ENST00000449502 RASSF8Q8NHQ8 419 aa11□□□□□ -0.65
RFC4-210ENST00000449502 CLIC6Q96NY7 704 aa11□□□□□ -0.65
RFC4-210ENST00000449502 PYM1Q9BRP8 204 aaKnown RBP11□□□□□ -0.65
RFC4-210ENST00000449502 CLSTN2Q9H4D0 955 aa11□□□□□ -0.65
RFC4-210ENST00000449502 SLC38A10Q9HBR0 1119 aa11□□□□□ -0.65
RFC4-210ENST00000449502 RAVER2Q9HCJ3 691 aaKnown RBP11□□□□□ -0.65
RFC4-210ENST00000449502 PIK3CDO00329 1044 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 TRAF5O00463 557 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 VWA5AO00534 786 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 ADAMTS3O15072 1205 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 NR1I2O75469 434 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 CELF2O95319 508 aaKnown RBP10.99□□□□□ -0.65
RFC4-210ENST00000449502 DSG3P32926 999 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 CLK2P49760 499 aaKnown RBP10.99□□□□□ -0.65
RFC4-210ENST00000449502 USP11P51784 963 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 NDUFA8P51970 172 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 ZNF445P59923 1031 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 CAMK4Q16566 473 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 CALCRLQ16602 461 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 TMEM266Q2M3C6 531 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 AXDND1Q5T1B0 1012 aaPredicted RBP10.99□□□□□ -0.65
RFC4-210ENST00000449502 L1TD1Q5T7N2 865 aaKnown RBP10.99□□□□□ -0.65
RFC4-210ENST00000449502 RESP18Q5W5W9 173 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 SASS6Q6UVJ0 657 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 SAMD3Q8N6K7 520 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 PROCA1Q8NCQ7 364 aaPredicted RBP10.99□□□□□ -0.65
RFC4-210ENST00000449502 OPTNQ96CV9 577 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 ATG4CQ96DT6 458 aa10.99□□□□□ -0.65
RFC4-210ENST00000449502 CLMNQ96JQ2 1002 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms