RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 FOXP2O15409 715 aa13.74□□□□□ -0.21
COPS7B-213ENST00000449174 RANBP6O60518 1105 aaKnown RBP13.74□□□□□ -0.21
COPS7B-213ENST00000449174 DNAJB2P25686 324 aa13.74□□□□□ -0.21
COPS7B-213ENST00000449174 CTDSPL2Q05D32 466 aa13.74□□□□□ -0.21
COPS7B-213ENST00000449174 FSCN1Q16658 493 aaKnown RBP13.74□□□□□ -0.21
COPS7B-213ENST00000449174 IQSEC1Q6DN90 963 aa13.74□□□□□ -0.21
COPS7B-213ENST00000449174 KCTD1Q719H9 257 aa13.74□□□□□ -0.21
COPS7B-213ENST00000449174 TLK2Q86UE8 772 aa13.74□□□□□ -0.21
COPS7B-213ENST00000449174 SLC43A3Q8NBI5 491 aa13.74□□□□□ -0.21
COPS7B-213ENST00000449174 MYLIPQ8WY64 445 aa13.74□□□□□ -0.21
COPS7B-213ENST00000449174 AP5M1Q9H0R1 490 aa13.74□□□□□ -0.21
COPS7B-213ENST00000449174 MTIF3Q9H2K0 278 aaKnown RBP13.74□□□□□ -0.21
COPS7B-213ENST00000449174 VTA1Q9NP79 307 aa13.74□□□□□ -0.21
COPS7B-213ENST00000449174 CYP39A1Q9NYL5 469 aa13.74□□□□□ -0.21
COPS7B-213ENST00000449174 CCPG1Q9ULG6 757 aa13.74□□□□□ -0.21
COPS7B-213ENST00000449174 MCM3APO60318 1980 aa13.74□□□□□ -0.21
COPS7B-213ENST00000449174 CD4P01730 458 aa13.73□□□□□ -0.21
COPS7B-213ENST00000449174 PCP11498 1178 aaKnown RBP13.73□□□□□ -0.21
COPS7B-213ENST00000449174 NT5C2P49902 561 aa13.73□□□□□ -0.21
COPS7B-213ENST00000449174 CCDC96Q2M329 555 aa13.73□□□□□ -0.21
COPS7B-213ENST00000449174 MCMDC2Q4G0Z9 681 aa13.73□□□□□ -0.21
COPS7B-213ENST00000449174 ANKRD45Q5TZF3 282 aa13.73□□□□□ -0.21
COPS7B-213ENST00000449174 BTNL9Q6UXG8 535 aa13.73□□□□□ -0.21
COPS7B-213ENST00000449174 MORC4Q8TE76 937 aa13.73□□□□□ -0.21
COPS7B-213ENST00000449174 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.73□□□□□ -0.21
COPS7B-213ENST00000449174 RANBP17Q9H2T7 1088 aaKnown RBP13.73□□□□□ -0.21
COPS7B-213ENST00000449174 TCP11L1Q9NUJ3 509 aa13.73□□□□□ -0.21
COPS7B-213ENST00000449174 ADD3Q9UEY8 706 aaKnown RBP13.73□□□□□ -0.21
COPS7B-213ENST00000449174 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.72□□□□□ -0.21
COPS7B-213ENST00000449174 NMT2O60551 498 aa13.72□□□□□ -0.21
COPS7B-213ENST00000449174 TOP1P11387 765 aaKnown RBP13.72□□□□□ -0.21
COPS7B-213ENST00000449174 CSF2RAP15509 400 aa13.72□□□□□ -0.21
COPS7B-213ENST00000449174 RRP1P56182 461 aaKnown RBP13.72□□□□□ -0.21
COPS7B-213ENST00000449174 HDAC1Q13547 482 aaPredicted RBP13.72□□□□□ -0.21
COPS7B-213ENST00000449174 ITGA7Q13683 1181 aa13.72□□□□□ -0.21
COPS7B-213ENST00000449174 TMEM240Q5SV17 173 aa13.72□□□□□ -0.21
COPS7B-213ENST00000449174 RASIP1Q5U651 963 aa13.72□□□□□ -0.21
COPS7B-213ENST00000449174 TIFAQ96CG3 184 aa13.72□□□□□ -0.21
COPS7B-213ENST00000449174 MPHOSPH6Q99547 160 aaKnown RBP13.72□□□□□ -0.21
COPS7B-213ENST00000449174 ZNF576Q9H609 170 aa13.72□□□□□ -0.21
COPS7B-213ENST00000449174 UNC80Q8N2C7 3258 aa13.72□□□□□ -0.21
COPS7B-213ENST00000449174 ASTN1O14525 1302 aa13.71□□□□□ -0.21
COPS7B-213ENST00000449174 SMPD1P17405 629 aa13.71□□□□□ -0.21
COPS7B-213ENST00000449174 PDE1AP54750 535 aa13.71□□□□□ -0.21
COPS7B-213ENST00000449174 IRX5P78411 483 aaPredicted RBP13.71□□□□□ -0.21
COPS7B-213ENST00000449174 BEX3Q00994 111 aa13.71□□□□□ -0.21
COPS7B-213ENST00000449174 AAMPQ13685 434 aa13.71□□□□□ -0.21
COPS7B-213ENST00000449174 MUM1L1Q5H9M0 696 aa13.71□□□□□ -0.21
COPS7B-213ENST00000449174 TAPT1Q6NXT6 567 aa13.71□□□□□ -0.21
COPS7B-213ENST00000449174 CXCL17Q6UXB2 119 aa13.71□□□□□ -0.21
COPS7B-213ENST00000449174 NSMFQ6X4W1 530 aa13.71□□□□□ -0.21
COPS7B-213ENST00000449174 SYMPKQ92797 1274 aaKnown RBP13.71□□□□□ -0.21
COPS7B-213ENST00000449174 TTC14Q96N46 770 aa13.71□□□□□ -0.21
COPS7B-213ENST00000449174 HIPK3Q9H422 1215 aa13.71□□□□□ -0.21
COPS7B-213ENST00000449174 IL23AQ9NPF7 189 aa13.71□□□□□ -0.21
COPS7B-213ENST00000449174 TOMM22Q9NS69 142 aa13.71□□□□□ -0.21
COPS7B-213ENST00000449174 A0A0C4DFX4 3053 aa13.71□□□□□ -0.22
COPS7B-213ENST00000449174 DYNC1LI2O43237 492 aaPredicted RBP13.7□□□□□ -0.22
COPS7B-213ENST00000449174 FGAP02671 866 aa13.7□□□□□ -0.22
COPS7B-213ENST00000449174 MFAP1P55081 439 aaKnown RBP13.7□□□□□ -0.22
COPS7B-213ENST00000449174 GRIN2CQ14957 1233 aa13.7□□□□□ -0.22
COPS7B-213ENST00000449174 RAB30Q15771 203 aa13.7□□□□□ -0.22
COPS7B-213ENST00000449174 DUSP28Q4G0W2 176 aa13.7□□□□□ -0.22
COPS7B-213ENST00000449174 VPS53Q5VIR6 699 aa13.7□□□□□ -0.22
COPS7B-213ENST00000449174 SYDE2Q5VT97 1194 aa13.7□□□□□ -0.22
COPS7B-213ENST00000449174 KIAA1211Q6ZU35 1233 aa13.7□□□□□ -0.22
COPS7B-213ENST00000449174 C16orf59Q7L2K0 433 aa13.7□□□□□ -0.22
COPS7B-213ENST00000449174 FBXO16Q8IX29 292 aaPredicted RBP13.7□□□□□ -0.22
COPS7B-213ENST00000449174 HERVK_113Q902F9 699 aa13.7□□□□□ -0.22
COPS7B-213ENST00000449174 TMEM47Q9BQJ4 181 aa13.7□□□□□ -0.22
COPS7B-213ENST00000449174 PPP1R12CQ9BZL4 782 aa13.7□□□□□ -0.22
COPS7B-213ENST00000449174 MAF1Q9H063 256 aa13.7□□□□□ -0.22
COPS7B-213ENST00000449174 INCENPQ9NQS7 918 aa13.7□□□□□ -0.22
COPS7B-213ENST00000449174 B4DLN1 442 aa13.69□□□□□ -0.22
COPS7B-213ENST00000449174 SUPT20HL2P0C7V6 817 aa13.69□□□□□ -0.22
COPS7B-213ENST00000449174 HSPD1P10809 573 aaKnown RBP13.69□□□□□ -0.22
COPS7B-213ENST00000449174 CPT1AP50416 773 aa13.69□□□□□ -0.22
COPS7B-213ENST00000449174 ALDH5A1P51649 535 aaPredicted RBP13.69□□□□□ -0.22
COPS7B-213ENST00000449174 MRPL12P52815 198 aaKnown RBP13.69□□□□□ -0.22
COPS7B-213ENST00000449174 SNAP25P60880 206 aa13.69□□□□□ -0.22
COPS7B-213ENST00000449174 BAATQ14032 418 aaPredicted RBP13.69□□□□□ -0.22
COPS7B-213ENST00000449174 BRDTQ58F21 947 aaPredicted RBP13.69□□□□□ -0.22
COPS7B-213ENST00000449174 RRP12Q5JTH9 1297 aaKnown RBP13.69□□□□□ -0.22
COPS7B-213ENST00000449174 ZNF365Q70YC5 407 aa13.69□□□□□ -0.22
COPS7B-213ENST00000449174 CHMP4CQ96CF2 233 aa13.69□□□□□ -0.22
COPS7B-213ENST00000449174 PBX4Q9BYU1 374 aa13.69□□□□□ -0.22
COPS7B-213ENST00000449174 RNF41Q9H4P4 317 aaPredicted RBP13.69□□□□□ -0.22
COPS7B-213ENST00000449174 POLR3EQ9NVU0 708 aa13.69□□□□□ -0.22
COPS7B-213ENST00000449174 MSRAQ9UJ68 235 aa13.69□□□□□ -0.22
COPS7B-213ENST00000449174 MTMR7Q9Y216 660 aa13.69□□□□□ -0.22
COPS7B-213ENST00000449174 LCTP09848 1927 aa13.68□□□□□ -0.22
COPS7B-213ENST00000449174 CCDC171Q6TFL3 1326 aa13.68□□□□□ -0.22
COPS7B-213ENST00000449174 WDR19Q8NEZ3 1342 aa13.68□□□□□ -0.22
COPS7B-213ENST00000449174 RAD50Q92878 1312 aa13.68□□□□□ -0.22
COPS7B-213ENST00000449174 A0A0D9SFI3 127 aa13.68□□□□□ -0.22
COPS7B-213ENST00000449174 RBM47A0AV96 593 aaKnown RBP13.68□□□□□ -0.22
COPS7B-213ENST00000449174 PTPDC1A2A3K4 754 aa13.68□□□□□ -0.22
COPS7B-213ENST00000449174 NKRFO15226 690 aaKnown RBP eCLIP13.68□□□□□ -0.22
COPS7B-213ENST00000449174 FGBP02675 491 aa13.68□□□□□ -0.22
COPS7B-213ENST00000449174 PDHBP11177 359 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms