RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 H7C1D1 291 aa10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 PPIP5K2O43314 1243 aa10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 NCK2O43639 380 aa10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 CLSTN1O94985 981 aa10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 GUCY1A2P33402 732 aa10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 PRPHP41219 470 aa10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 BYSLQ13895 437 aaKnown RBP10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 CFAP221Q4G0U5 840 aa10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 NBPF5PQ86XG9 351 aaPredicted RBP10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 RAPGEF5Q92565 580 aa10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 IFIH1Q9BYX4 1025 aaKnown RBP10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 EID1Q9Y6B2 187 aa10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 DIAPH2O60879 1101 aa10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 TBC1D1Q86TI0 1168 aaPredicted RBP10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 TRIM22Q8IYM9 498 aa10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 SLC12A6Q9UHW9 1150 aa10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 CORO1CQ9ULV4 474 aaPredicted RBP10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 ERICH2A1L162 156 aa10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 C5orf60A6NFR6 353 aa10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 TRIM75PA6NK02 468 aa10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 B4E1Z4 1266 aa10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 TRIM37O94972 964 aa10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 HLTFQ14527 1009 aaKnown RBP eCLIP10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 ACSBG1Q96GR2 724 aa10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 MS4A14Q96JA4 679 aa10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 TAF1DQ9H5J8 278 aaPredicted RBP10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 MAGEC2Q9UBF1 373 aaPredicted RBP10.43□□□□□ -0.74
SYNPO2-204ENST00000448416 CCT8L1PA6NM43 557 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 FMNL1O95466 1100 aaPredicted RBP10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 XAGE3Q8WTP9 111 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 METTL22Q9BUU2 404 aaPredicted RBP10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 SH2D4AQ9H788 454 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 FAM217BQ9NTX9 383 aaPredicted RBP10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 SLC12A7Q9Y666 1083 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 DNM2P50570 870 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 RAB27AP51159 221 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 PPP2R2AP63151 447 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 ZBED6P86452 979 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 PSMD2Q13200 908 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 TMEM67Q5HYA8 995 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 LMBR1LQ6UX01 489 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 RUFY4Q6ZNE9 571 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 OR2W6PQ8NHA6 318 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 NUP133Q8WUM0 1156 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 CASKIN2Q8WXE0 1202 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 ZNF570Q96NI8 536 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 UBAC1Q9BSL1 405 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 A2ML1A8K2U0 1454 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 NEFHP12036 1026 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 RIPK1Q13546 671 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 SLC30A9Q6PML9 568 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 COPS6Q7L5N1 327 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 CCDC197Q8NCU1 140 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 AGAP11Q8TF27 550 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 FAM210AQ96ND0 272 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 TBC1D2BQ9UPU7 963 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 PCDHA13Q9Y5I0 950 aa10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 MYO5AQ9Y4I1 1855 aaKnown RBP10.42□□□□□ -0.74
SYNPO2-204ENST00000448416 STK36Q9NRP7 1315 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 TRIM49BA6NDI0 452 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 KIF4AO95239 1232 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 ZFYP08048 801 aaPredicted RBP10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 DNA2P51530 1060 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 SF3A3Q12874 501 aaKnown RBP eCLIP10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 RABL6Q3YEC7 729 aaPredicted RBP10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 AKAP4Q5JQC9 854 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 IRF2BP1Q8IU81 584 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 ANKS4BQ8N8V4 417 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 ZNF507Q8TCN5 953 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 OXER1Q8TDS5 423 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 PUS7LQ9H0K6 701 aaKnown RBP10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 KDM3BQ7LBC6 1761 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 A0A087WZG4 1122 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 B4DLN1 442 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 ZNF263O14978 683 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 GPAA1O43292 621 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 PDCD2Q16342 344 aaPredicted RBP10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 ZNF658Q5TYW1 1059 aaPredicted RBP10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 NKX2-3Q8TAU0 364 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 TMEM87BQ96K49 555 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 KRT12Q99456 494 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 PLCB1Q9NQ66 1216 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 GDAQ9Y2T3 454 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 MYH13Q9UKX3 1938 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 CTNNA1P35221 906 aaKnown RBP10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 PRCPP42785 496 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 BIRC3Q13489 604 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 LRIG3Q6UXM1 1119 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 APPBP2Q92624 585 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 PANK4Q9NVE7 773 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 NOVA2Q9UNW9 492 aaKnown RBP10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 NWD1Q149M9 1564 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 NWD2Q9ULI1 1742 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 XDHP47989 1333 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 AHCYL1O43865 530 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 ZPR1O75312 459 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 IFNAR1P17181 557 aa10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 EEF1GP26641 437 aaKnown RBP10.41□□□□□ -0.74
SYNPO2-204ENST00000448416 HSPA9P38646 679 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms