RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 FRMPD2Q68DX3 1309 aaPredicted RBP33.38■■■□□ 2.93
CBX4-202ENST00000448310 CCDC171Q6TFL3 1326 aa33.38■■■□□ 2.93
CBX4-202ENST00000448310 CTAGE5O15320 804 aa33.38■■■□□ 2.93
CBX4-202ENST00000448310 BEX3Q00994 111 aa33.38■■■□□ 2.93
CBX4-202ENST00000448310 CYP39A1Q9NYL5 469 aa33.38■■■□□ 2.93
CBX4-202ENST00000448310 ELP1O95163 1332 aa33.37■■■□□ 2.93
CBX4-202ENST00000448310 ASB14A6NK59 587 aa33.37■■■□□ 2.93
CBX4-202ENST00000448310 TOP1P11387 765 aaKnown RBP33.37■■■□□ 2.93
CBX4-202ENST00000448310 PTGS1P23219 599 aa33.37■■■□□ 2.93
CBX4-202ENST00000448310 TNFAIP2Q03169 654 aa33.37■■■□□ 2.93
CBX4-202ENST00000448310 FPGSQ05932 587 aa33.37■■■□□ 2.93
CBX4-202ENST00000448310 NSMFQ6X4W1 530 aa33.37■■■□□ 2.93
CBX4-202ENST00000448310 NOL8Q76FK4 1167 aaKnown RBP33.37■■■□□ 2.93
CBX4-202ENST00000448310 PURBQ96QR8 312 aaKnown RBP33.37■■■□□ 2.93
CBX4-202ENST00000448310 GPCPD1Q9NPB8 672 aa33.37■■■□□ 2.93
CBX4-202ENST00000448310 ZMYM6O95789 1325 aa33.36■■■□□ 2.93
CBX4-202ENST00000448310 DLL1O00548 723 aa33.36■■■□□ 2.93
CBX4-202ENST00000448310 ICAM1P05362 532 aa33.36■■■□□ 2.93
CBX4-202ENST00000448310 SMC5Q8IY18 1101 aa33.36■■■□□ 2.93
CBX4-202ENST00000448310 RNPC3Q96LT9 517 aaKnown RBP33.36■■■□□ 2.93
CBX4-202ENST00000448310 RANBP17Q9H2T7 1088 aaKnown RBP33.36■■■□□ 2.93
CBX4-202ENST00000448310 CDK7P50613 346 aa33.35■■■□□ 2.93
CBX4-202ENST00000448310 EEPD1Q7L9B9 569 aa33.35■■■□□ 2.93
CBX4-202ENST00000448310 TBX21Q9UL17 535 aa33.35■■■□□ 2.93
CBX4-202ENST00000448310 SYDE2Q5VT97 1194 aa33.34■■■□□ 2.93
CBX4-202ENST00000448310 BTNL9Q6UXG8 535 aa33.34■■■□□ 2.93
CBX4-202ENST00000448310 TICAM2Q86XR7 235 aa33.34■■■□□ 2.93
CBX4-202ENST00000448310 TBC1D10CQ8IV04 446 aa33.34■■■□□ 2.93
CBX4-202ENST00000448310 FBXO16Q8IX29 292 aaPredicted RBP33.34■■■□□ 2.93
CBX4-202ENST00000448310 RWDD1Q9H446 243 aaPredicted RBP33.34■■■□□ 2.93
CBX4-202ENST00000448310 PDGFCQ9NRA1 345 aa33.34■■■□□ 2.93
CBX4-202ENST00000448310 TCP11L1Q9NUJ3 509 aa33.34■■■□□ 2.93
CBX4-202ENST00000448310 A0A0C4DFX4 3053 aa33.34■■■□□ 2.93
CBX4-202ENST00000448310 MROH7Q68CQ1 1323 aa33.33■■■□□ 2.93
CBX4-202ENST00000448310 A0A0U1RQG5 324 aaPredicted RBP33.33■■■□□ 2.93
CBX4-202ENST00000448310 SMAD3P84022 425 aaKnown RBP33.33■■■□□ 2.93
CBX4-202ENST00000448310 GNEQ9Y223 722 aaKnown RBP33.33■■■□□ 2.93
CBX4-202ENST00000448310 ARVCFO00192 962 aa33.32■■■□□ 2.92
CBX4-202ENST00000448310 TIMP1P01033 207 aa33.32■■■□□ 2.92
CBX4-202ENST00000448310 IGHDP01880 384 aa33.32■■■□□ 2.92
CBX4-202ENST00000448310 SDSP20132 328 aa33.32■■■□□ 2.92
CBX4-202ENST00000448310 AKNAD1Q5T1N1 836 aa33.32■■■□□ 2.92
CBX4-202ENST00000448310 TMEM63BQ5T3F8 832 aa33.32■■■□□ 2.92
CBX4-202ENST00000448310 TLK2Q86UE8 772 aa33.32■■■□□ 2.92
CBX4-202ENST00000448310 LAMA4Q16363 1823 aa33.31■■■□□ 2.92
CBX4-202ENST00000448310 PDHBP11177 359 aa33.31■■■□□ 2.92
CBX4-202ENST00000448310 SMPD1P17405 629 aa33.31■■■□□ 2.92
CBX4-202ENST00000448310 NKX3-2P78367 333 aa33.31■■■□□ 2.92
CBX4-202ENST00000448310 AAMPQ13685 434 aa33.31■■■□□ 2.92
CBX4-202ENST00000448310 MFSD6Q6ZSS7 791 aa33.31■■■□□ 2.92
CBX4-202ENST00000448310 CHD1LQ86WJ1 897 aa33.31■■■□□ 2.92
CBX4-202ENST00000448310 PLEKHM2Q8IWE5 1019 aa33.31■■■□□ 2.92
CBX4-202ENST00000448310 SEMA6BQ9H3T3 888 aa33.31■■■□□ 2.92
CBX4-202ENST00000448310 NFIBO00712 420 aa33.3■■■□□ 2.92
CBX4-202ENST00000448310 BAATQ14032 418 aaPredicted RBP33.3■■■□□ 2.92
CBX4-202ENST00000448310 TAPT1Q6NXT6 567 aa33.3■■■□□ 2.92
CBX4-202ENST00000448310 CXCL17Q6UXB2 119 aa33.3■■■□□ 2.92
CBX4-202ENST00000448310 TTYH1Q9H313 450 aaPredicted RBP33.3■■■□□ 2.92
CBX4-202ENST00000448310 DYNC1LI2O43237 492 aaPredicted RBP33.29■■■□□ 2.92
CBX4-202ENST00000448310 FAM126BQ8IXS8 530 aa33.29■■■□□ 2.92
CBX4-202ENST00000448310 CDX2Q99626 313 aaPredicted RBP33.29■■■□□ 2.92
CBX4-202ENST00000448310 NEDD4P46934 1319 aa33.28■■■□□ 2.92
CBX4-202ENST00000448310 FSCN1Q16658 493 aaKnown RBP33.28■■■□□ 2.92
CBX4-202ENST00000448310 EXOC6Q8TAG9 804 aa33.28■■■□□ 2.92
CBX4-202ENST00000448310 ZKSCAN3Q9BRR0 538 aa33.28■■■□□ 2.92
CBX4-202ENST00000448310 PPP1R12CQ9BZL4 782 aa33.28■■■□□ 2.92
CBX4-202ENST00000448310 AP5M1Q9H0R1 490 aa33.28■■■□□ 2.92
CBX4-202ENST00000448310 NUCB1Q02818 461 aa33.27■■■□□ 2.92
CBX4-202ENST00000448310 MFSD5Q6N075 450 aa33.27■■■□□ 2.92
CBX4-202ENST00000448310 PTPDC1A2A3K4 754 aa33.26■■■□□ 2.91
CBX4-202ENST00000448310 MFAP1P55081 439 aaKnown RBP33.26■■■□□ 2.91
CBX4-202ENST00000448310 ZNF543Q08ER8 600 aa33.26■■■□□ 2.91
CBX4-202ENST00000448310 IQSEC1Q6DN90 963 aa33.26■■■□□ 2.91
CBX4-202ENST00000448310 CWC27Q6UX04 472 aaKnown RBP33.26■■■□□ 2.91
CBX4-202ENST00000448310 SLC30A10Q6XR72 485 aa33.26■■■□□ 2.91
CBX4-202ENST00000448310 KIAA1211Q6ZU35 1233 aa33.26■■■□□ 2.91
CBX4-202ENST00000448310 MORC4Q8TE76 937 aa33.26■■■□□ 2.91
CBX4-202ENST00000448310 TTC14Q96N46 770 aa33.26■■■□□ 2.91
CBX4-202ENST00000448310 BUD13Q9BRD0 619 aaKnown RBP eCLIP33.26■■■□□ 2.917e-7■■■□□ 15.3
CBX4-202ENST00000448310 OSBPL3Q9H4L5 887 aa33.26■■■□□ 2.91
CBX4-202ENST00000448310 VTA1Q9NP79 307 aa33.26■■■□□ 2.91
CBX4-202ENST00000448310 CUL9Q8IWT3 2517 aa33.26■■■□□ 2.91
CBX4-202ENST00000448310 UNC80Q8N2C7 3258 aa33.25■■■□□ 2.91
CBX4-202ENST00000448310 TLR3O15455 904 aaKnown RBP33.25■■■□□ 2.91
CBX4-202ENST00000448310 PCP11498 1178 aaKnown RBP33.25■■■□□ 2.91
CBX4-202ENST00000448310 ALDH5A1P51649 535 aaPredicted RBP33.25■■■□□ 2.91
CBX4-202ENST00000448310 RNF41Q9H4P4 317 aaPredicted RBP33.25■■■□□ 2.91
CBX4-202ENST00000448310 CDH23Q9H251 3354 aa33.24■■■□□ 2.91
CBX4-202ENST00000448310 CSF2RAP15509 400 aa33.24■■■□□ 2.91
CBX4-202ENST00000448310 CLEC4DQ8WXI8 215 aa33.24■■■□□ 2.91
CBX4-202ENST00000448310 ESR2Q92731 530 aa33.24■■■□□ 2.91
CBX4-202ENST00000448310 ADD3Q9UEY8 706 aaKnown RBP33.24■■■□□ 2.91
CBX4-202ENST00000448310 ZNF213O14771 459 aa33.23■■■□□ 2.91
CBX4-202ENST00000448310 CD4P01730 458 aa33.23■■■□□ 2.91
CBX4-202ENST00000448310 SNHG28P0DPA3 235 aa33.23■■■□□ 2.91
CBX4-202ENST00000448310 CALML3P27482 149 aa33.23■■■□□ 2.91
CBX4-202ENST00000448310 C16orf59Q7L2K0 433 aa33.23■■■□□ 2.91
CBX4-202ENST00000448310 MYLIPQ8WY64 445 aa33.23■■■□□ 2.91
CBX4-202ENST00000448310 DIAPH3Q9NSV4 1193 aa33.23■■■□□ 2.91
CBX4-202ENST00000448310 GRIN2DO15399 1336 aa33.23■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms